Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0443500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:14887908:14890425:1 gene:Os12g0443500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UGD4 description:Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). (Os12t0443500-01)
Sequence	ATGGTGAAGATCTGCTGCATTGGAGCTGGCTATGTCGGCGGCCCAACCATGGCCGTCATT GCCCTCAAATGCCCAGCAATCGAGGTGGTGGTTGTTGACATTTCCAAGCCTCGCATTGAT GCCTGGAACAGCGAACAGCTCCCGATCTACGAGCCTGGCCTCGATGAGGTCGTGAAGGAG TGCAGAGGCAGGAACCTCTTCTTCAGCACTGATGTGGAGAAGCATGTCGCCGAGGCGAAC ATCATCTTTGTATCTGTCAACACCCCCACCAAGACCCGTGGTCTTGGAGCAGGCAAGGCT GCTGACCTCACCTACTGGGAAAGTGCTGCTCGGATGATTGCTGATGTCTCCAAGTCTGAC AAGATCGTTGTTGAGAAGTCCACTGTCCCTGTCAAGACTGCAGAGGCCATTGAGAAGATC TTGACCCACAACAGCAAGGGCATCAACTACCAGATCCTCTCAAACCCGGAGTTCCTCGCG GAGGGCACTGCGATCGAAGATCTGTTCAAGCCTGACAGAGTGCTCATTGGTGGCCGGGAG ACCCCTGAGGGCAAGAAGGCTGTTCAGGCTCTCAAGGAGGTGTACGCCCACTGGGTTCCT GAGGACAGGATTATCACCACCAACCTGTGGTCCGCTGAGCTCTCCAAGCTCGCAGCCAAC GCGTTCTTGGCACAGAGGATCTCCTCTGTGAATGCCATCTCCGCCCTATGCGAGGCGACT GGTGCCAATGTGGCCGAGGTTGCTTACTCTGTGGGAAAGGACTCCAGGATTGGCCCCAAG TTCCTGAACGCCAGTGTTGGCTTTGGTGGATCCTGTTTCCAGAAGGACATCCTGAACCTT GTGTACATCTGCGAGTGCAATGGCCTTCCCGAGGTGGCCAACTACTGGAAGCAGGTCATC AAGATCAACGACTACCAGAAGAGCCGGTTTGTCAACCGCGTTGTGTCCTCCATGTTCAAC ACAGTCTCCGGCAAGAAGATCGCCGTCCTTGGCTTTGCGTTCAAGAAGGACACCGGTGAC ACCAGGGAGACACCAGCCATTGATGTGTGCCACGGTCTGTTGGGTGACAAGGCACAGATC AGCATCTACGATCCACAGGTCACCGAGGACCAGATCCAGCGGGACCTCGCCATGAGCAAG TTCGACTGGGACCACCCGATGCACCTGCAGCCGACCAGCCCCACTGCATTCAAGCAGGTG AGCGTGGTGTGGGATGCATATGAGGCCACCAAGGGGGCCCATGGTGTCTGCATCCTCACC GAGTGGGACGAGTTCAAGACCTTGGACTACCAGAAGATCTTTGACAACATGCAGAAGCCT GCATTCGTCTTTGATGGGCGCAATGTGGTCGATGCCGAGAAGCTCAGGGAGATTGGGTTC ATCGTCTACTCCATCGGCAAGCCGCTTGATGCCTGGCTCAAGGACATGCCCGCGGTTGCA TAA

Peptide Sequence

PEP ID	Os12t0443500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:14887908:14890425:1 gene:Os12g0443500 transcript:Os12t0443500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UGD4 description:Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). (Os12t0443500-01)
Sequence	MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKE CRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLIGGRE TPEGKKAVQALKEVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEAT GANVAEVAYSVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI KINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQI SIYDPQVTEDQIQRDLAMSKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKGAHGVCILT EWDEFKTLDYQKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA

Transcript Sequence

Transcript ID	Os12t0443500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:14887908:14890425:1 gene:Os12g0443500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UGD4 description:Similar to UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH). (Os12t0443500-01)
Sequence	ATATCGTAGGCAGCTTCCCTCTGCATACAAGAGGCTGCCTCCCATTTCTCTTCTCTGTCG GTGTTCTCCTCAAGATCTGTCTTAAGTTCTTGAGATCTGTTTCAGAACTAAGCTGAGAAG ATGGTGAAGATCTGCTGCATTGGAGCTGGCTATGTCGGCGGCCCAACCATGGCCGTCATT GCCCTCAAATGCCCAGCAATCGAGGTGGTGGTTGTTGACATTTCCAAGCCTCGCATTGAT GCCTGGAACAGCGAACAGCTCCCGATCTACGAGCCTGGCCTCGATGAGGTCGTGAAGGAG TGCAGAGGCAGGAACCTCTTCTTCAGCACTGATGTGGAGAAGCATGTCGCCGAGGCGAAC ATCATCTTTGTATCTGTCAACACCCCCACCAAGACCCGTGGTCTTGGAGCAGGCAAGGCT GCTGACCTCACCTACTGGGAAAGTGCTGCTCGGATGATTGCTGATGTCTCCAAGTCTGAC AAGATCGTTGTTGAGAAGTCCACTGTCCCTGTCAAGACTGCAGAGGCCATTGAGAAGATC TTGACCCACAACAGCAAGGGCATCAACTACCAGATCCTCTCAAACCCGGAGTTCCTCGCG GAGGGCACTGCGATCGAAGATCTGTTCAAGCCTGACAGAGTGCTCATTGGTGGCCGGGAG ACCCCTGAGGGCAAGAAGGCTGTTCAGGCTCTCAAGGAGGTGTACGCCCACTGGGTTCCT GAGGACAGGATTATCACCACCAACCTGTGGTCCGCTGAGCTCTCCAAGCTCGCAGCCAAC GCGTTCTTGGCACAGAGGATCTCCTCTGTGAATGCCATCTCCGCCCTATGCGAGGCGACT GGTGCCAATGTGGCCGAGGTTGCTTACTCTGTGGGAAAGGACTCCAGGATTGGCCCCAAG TTCCTGAACGCCAGTGTTGGCTTTGGTGGATCCTGTTTCCAGAAGGACATCCTGAACCTT GTGTACATCTGCGAGTGCAATGGCCTTCCCGAGGTGGCCAACTACTGGAAGCAGGTCATC AAGATCAACGACTACCAGAAGAGCCGGTTTGTCAACCGCGTTGTGTCCTCCATGTTCAAC ACAGTCTCCGGCAAGAAGATCGCCGTCCTTGGCTTTGCGTTCAAGAAGGACACCGGTGAC ACCAGGGAGACACCAGCCATTGATGTGTGCCACGGTCTGTTGGGTGACAAGGCACAGATC AGCATCTACGATCCACAGGTCACCGAGGACCAGATCCAGCGGGACCTCGCCATGAGCAAG TTCGACTGGGACCACCCGATGCACCTGCAGCCGACCAGCCCCACTGCATTCAAGCAGGTG AGCGTGGTGTGGGATGCATATGAGGCCACCAAGGGGGCCCATGGTGTCTGCATCCTCACC GAGTGGGACGAGTTCAAGACCTTGGACTACCAGAAGATCTTTGACAACATGCAGAAGCCT GCATTCGTCTTTGATGGGCGCAATGTGGTCGATGCCGAGAAGCTCAGGGAGATTGGGTTC ATCGTCTACTCCATCGGCAAGCCGCTTGATGCCTGGCTCAAGGACATGCCCGCGGTTGCA TAATAATTTTCCATATTCCACACCTGAACCTCATAGCTCTCTACACTCTGCTGGTGCTGA AGAGAGTCTGCGTCGAAGAGGAATTTGGTTGACCATCATTTTTTATAGCTCGTTGTTCGT CTTTACATACAGGAGAGGCTACCATTTTGTCAAACAGAAAGTTGATTTCTGTTAGTATCT TTGTTCAAGTTTTTCTTGTGTTGCACCATTGTAGATCTGAAATCTTCAGGCCTCTACCGT TTGAGTGCCACCCTCAATCTTGTATGATGACATGAATTCTTATAGCCGATTTATTCTTCA AATGT