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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0442900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:14838547:14845405:-1 gene:Os12g0442900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os12t0442900-01)
Sequence

ATGGGCGCCGATGGCGGCGGCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCG
GCGGAGGCGGCACGGGCGGGGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTC
GCCGACAGCATCGCGTCCAGCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACC
GCTCCTCCAGAGGGACAAGTTATAGACACAGACACCACAAACATTTTAATCAGATCTCTC
CAGTTGAGCAAACAGAAAAATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGC
AGCAAGGGGAAAAGGTCTGCTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCT
AACACTGGCAGCACGGCAGGGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAG
CAGACGCTCCAATCATTTACGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTC
TCACCAAAAGGCAAAAAGGATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGA

Peptide Sequence

PEP ID

Os12t0442900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:14838547:14845405:-1 gene:Os12g0442900 transcript:Os12t0442900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os12t0442900-01)
Sequence

MGADGGGGGGRKSSSPAGKPAEAARAGSLLAGLPSRGNFVADSIASSMGGLPVYVCLHDT
APPEGQVIDTDTTNILIRSLQLSKQKNEAKDVGSRTPGESSKGKRSASRLLDGKNPSKRA
NTGSTAGSSAHGELGSVFSEQTLQSFTVEKLRILLKERGLSPKGKKDELIARLIESSE

Transcript Sequence

Transcript ID

Os12t0442900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:14838547:14845405:-1 gene:Os12g0442900 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-binding SAP domain containing protein. (Os12t0442900-01)
Sequence

AACCTTTCCTCTTCTTCCTCTTCCCCTCCCTCTCGCTGCCTGCCGCCTCTGCTTGCTCAG
ATCTTCTCCTCTCCTTCCCGGATTCCACCCTCAGTTGTTGTCTCACAGTCTCCGAATCGC
TGGGCGGTGGAGCCATTGGTGCTCACCCACGGGCACGGGCGATGGGCGCCGATGGCGGCG
GCGGCGGAGGCCGGAAGAGCTCGTCGCCGGCCGGGAAGCCGGCGGAGGCGGCACGGGCGG
GGAGCCTGCTCGCCGGACTCCCCTCGCGGGGCAACTTCGTCGCCGACAGCATCGCGTCCA
GCATGGGAGGCCTCCCGGTTTATGTCTGCCTGCACGACACCGCTCCTCCAGAGGGACAAG
TTATAGACACAGACACCACAAACATTTTAATCAGATCTCTCCAGTTGAGCAAACAGAAAA
ATGAGGCAAAAGATGTAGGATCAAGGACTCCAGGAGAAAGCAGCAAGGGGAAAAGGTCTG
CTTCCAGACTTTTAGATGGCAAGAATCCATCTAAAAGAGCTAACACTGGCAGCACGGCAG
GGTCATCTGCCCATGGGGAATTGGGATCTGTTTTTTCTGAGCAGACGCTCCAATCATTTA
CGGTGGAGAAGTTGCGTATTCTTCTGAAAGAGAGAGGGCTCTCACCAAAAGGCAAAAAGG
ATGAACTGATCGCCCGCTTAATTGAGTCCTCGGAGTGATCTGAACTGCGATCGGAACCTC
ATTTTGTTGGATGTTGTACCGTAGTGACGATCATACACCATGCAAGTGAACTTCTATCGC
AGACCTCATGTAAGCATATATTTCATACAGTGCCGAAATGAAAGATCTGGCTGATAGTTT
CCACAT