Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0434400-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:14109246:14114260:1 gene:Os12g0434400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0434400-00)
Sequence	ATGGAAGGACACACCGCCCCCACTCTCGGCCTCACCATGCCCAACGTCGTCGATCCTCCT CAGATCAGTTTTGCCGCCAAGGACATGGACCTCACCGAGTGGGAGGGAGACATCCTAGCC GTCCTTGTGACCGAGACCGACGTGTCCAAGGCGACATCATCAAGCTCCAGGTTCACGAAC GCCGCCGCAGCGCTGGCGAAGCTCGACGGCGAGCTCGGCGGCCTCCTGTCGGAGGCGTCG GCGGAGGAGGAGTTCGCCGGGAGAGCCGGGCAGTCGGTGGCTCTCCGGCTCCCCACGGCG CCGGGGCTCCACGGTTTCAAGAGGGTGTGCCTCGTCGGCGTTGGCAACAACATGCCGTCC TCAGCTGCGGCTTGCCGGAGCACCGGCGAGACCATCGCGGCGGTCGCCAAGTCCGCGCAG GCTCGCAGCGCCGCCGTTGCTCTCGCCTCGCCGCCGCCGGGTTGGGTTCAGGGAGAGGAT CTTAGGCTGAATGCTGCTGCGGCAGTGGCTTCTGGAGTTGTGCTTGGGTTGCACGAGGAC AGGAGATACAAGTCTGACTCCAAGAAGGTGCATCTCAAGCAAGTAGATCTTATCGGATTT GGCTCCGGCCAAGAGATGGGCAGGAAACTTCAGTACGCCAACCATGTTTCCTCAGCCGTG ATCTTCGCCAAAGAGCTTGTGAACTCACCTGCAAATGTCCTTACCCCTGCTGTTCTCGCG GAGGAGGCATCGAACATTGCTTCTAGTTACAGTGACGTGTTGACGGCGACGATATTAGAC GAGGAGAAATGCAGGGAGCTGAAGATGGGTTCGTACTTGGCAGTTGCTGCAGCCTCTGCA AATCCTCCACACTTTATACACTTGTGCTACAAACCCCCTGGAGGAAATGTCAAGAGAAAG CTAGCAATTGTTGGGAAGGGCCTCACATTCGACAGTGGGGGCTACAACATTAAGATTGGA GCAGTCACCACTATTGAGCTGATGAAGAAAGATATGGGTGGCTCTGCAGCATTGTTTGGT GCAGCAAAAGCTTTGGGCCAAATCAAGCCTCCTGGAGTAGAGGTTCATTTTATTTCTGCT GCATGCGAAAATATGATAAGTGGCACAGGCATGAGGCCTGGTGACATTGTGACTGCTTCT AATGGAAAAACTATTGAGGTGGACAACACTGATGCAGAAGGAAGGCTTACACTTGCTGAT GCTTTGGTATATGCCTGTAAACTGGGTGTTGACAAGATTATTGATCTGGCAACACTTACT GGTTACTGCAGAATTGCACTTGGTCCTAGCATTGCTGGGATTTTGACTCCAAGTGATGAA CTGGACAAGGAAGTCGCTGCCGCATATGAGGCATCAGGAGAGAAGTTCTGGAGACTGCCA CTAGAAGAAAGCTATTGGGAGCAAATGAAGTCTAGCGTTGCTGATATGCTTAACACCGGT AGTCCGCTGGGTGGTGCAATTACGGCTGGACTATTTCTGAAGCAGTTTGTTGATGAGAAA GTGAAGTGGATGCACGTTGACATGGCTGGGCCGGTTTGGAACTACAAAAAGCAAGAAGCC ACCGGATTCGGCGTGTCCACATTGGTGGAGTGGGTCCTCATCAACTCGTCTTAG

Peptide Sequence

PEP ID	Os12t0434400-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:14109246:14114260:1 gene:Os12g0434400 transcript:Os12t0434400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0434400-00)
Sequence	MEGHTAPTLGLTMPNVVDPPQISFAAKDMDLTEWEGDILAVLVTETDVSKATSSSSRFTN AAAALAKLDGELGGLLSEASAEEEFAGRAGQSVALRLPTAPGLHGFKRVCLVGVGNNMPS SAAACRSTGETIAAVAKSAQARSAAVALASPPPGWVQGEDLRLNAAAAVASGVVLGLHED RRYKSDSKKVHLKQVDLIGFGSGQEMGRKLQYANHVSSAVIFAKELVNSPANVLTPAVLA EEASNIASSYSDVLTATILDEEKCRELKMGSYLAVAAASANPPHFIHLCYKPPGGNVKRK LAIVGKGLTFDSGGYNIKIGAVTTIELMKKDMGGSAALFGAAKALGQIKPPGVEVHFISA ACENMISGTGMRPGDIVTASNGKTIEVDNTDAEGRLTLADALVYACKLGVDKIIDLATLT GYCRIALGPSIAGILTPSDELDKEVAAAYEASGEKFWRLPLEESYWEQMKSSVADMLNTG SPLGGAITAGLFLKQFVDEKVKWMHVDMAGPVWNYKKQEATGFGVSTLVEWVLINSS

Transcript Sequence

Transcript ID	Os12t0434400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:14109246:14114260:1 gene:Os12g0434400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0434400-00)
Sequence	GCTCGAATGGAAGGACACACCGCCCCCACTCTCGGCCTCACCATGCCCAACGTCGTCGAT CCTCCTCAGATCAGTTTTGCCGCCAAGGACATGGACCTCACCGAGTGGGAGGGAGACATC CTAGCCGTCCTTGTGACCGAGACCGACGTGTCCAAGGCGACATCATCAAGCTCCAGGTTC ACGAACGCCGCCGCAGCGCTGGCGAAGCTCGACGGCGAGCTCGGCGGCCTCCTGTCGGAG GCGTCGGCGGAGGAGGAGTTCGCCGGGAGAGCCGGGCAGTCGGTGGCTCTCCGGCTCCCC ACGGCGCCGGGGCTCCACGGTTTCAAGAGGGTGTGCCTCGTCGGCGTTGGCAACAACATG CCGTCCTCAGCTGCGGCTTGCCGGAGCACCGGCGAGACCATCGCGGCGGTCGCCAAGTCC GCGCAGGCTCGCAGCGCCGCCGTTGCTCTCGCCTCGCCGCCGCCGGGTTGGGTTCAGGGA GAGGATCTTAGGCTGAATGCTGCTGCGGCAGTGGCTTCTGGAGTTGTGCTTGGGTTGCAC GAGGACAGGAGATACAAGTCTGACTCCAAGAAGGTGCATCTCAAGCAAGTAGATCTTATC GGATTTGGCTCCGGCCAAGAGATGGGCAGGAAACTTCAGTACGCCAACCATGTTTCCTCA GCCGTGATCTTCGCCAAAGAGCTTGTGAACTCACCTGCAAATGTCCTTACCCCTGCTGTT CTCGCGGAGGAGGCATCGAACATTGCTTCTAGTTACAGTGACGTGTTGACGGCGACGATA TTAGACGAGGAGAAATGCAGGGAGCTGAAGATGGGTTCGTACTTGGCAGTTGCTGCAGCC TCTGCAAATCCTCCACACTTTATACACTTGTGCTACAAACCCCCTGGAGGAAATGTCAAG AGAAAGCTAGCAATTGTTGGGAAGGGCCTCACATTCGACAGTGGGGGCTACAACATTAAG ATTGGAGCAGTCACCACTATTGAGCTGATGAAGAAAGATATGGGTGGCTCTGCAGCATTG TTTGGTGCAGCAAAAGCTTTGGGCCAAATCAAGCCTCCTGGAGTAGAGGTTCATTTTATT TCTGCTGCATGCGAAAATATGATAAGTGGCACAGGCATGAGGCCTGGTGACATTGTGACT GCTTCTAATGGAAAAACTATTGAGGTGGACAACACTGATGCAGAAGGAAGGCTTACACTT GCTGATGCTTTGGTATATGCCTGTAAACTGGGTGTTGACAAGATTATTGATCTGGCAACA CTTACTGGTTACTGCAGAATTGCACTTGGTCCTAGCATTGCTGGGATTTTGACTCCAAGT GATGAACTGGACAAGGAAGTCGCTGCCGCATATGAGGCATCAGGAGAGAAGTTCTGGAGA CTGCCACTAGAAGAAAGCTATTGGGAGCAAATGAAGTCTAGCGTTGCTGATATGCTTAAC ACCGGTAGTCCGCTGGGTGGTGCAATTACGGCTGGACTATTTCTGAAGCAGTTTGTTGAT GAGAAAGTGAAGTGGATGCACGTTGACATGGCTGGGCCGGTTTGGAACTACAAAAAGCAA GAAGCCACCGGATTCGGCGTGTCCACATTGGTGGAGTGGGTCCTCATCAACTCGTCTTAG AACAAA