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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0432600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:13982073:13982902:1 gene:Os12g0432600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0432600-01)
Sequence

ATGGACGCACCTCGCCGGCGGAGCAACGGCGCGTGGGAGATCAACCTGGTGCGGCGGAGC
CCGGCCACGGCGCGGACCGACCGCTGCTCGAGGCTGCTGCTGCTGTGGAGCGGGTTCGTC
GGCGTCGTCGTCGTGCTCTACCTGTTCGTCGGCCACGTCTGGGCGTCCGTCGCCACGGCG
GTGCTCCTCGCCGCCGCGGGCTGGTTCACCTGGTACTACTTCGGCGCGGCGCCGGCGCCG
CCGGTGCTCCCCGATCATCATCAGCCGGCGGCGCCGGTGGAGGCCCGCGGGCTCAGCCAG
GAGGACATCGAGGCCATCCCGGCGTTCGAGTACAGGAGGGGATCATCGGGCAGCGGGGTG
GCGCAGTGCGCGGTGTGCATCGCCGCCGTGAAGGACGGGGACACGGTGCGGCGGCTGCCG
GCGTGCGGCCACGCGTTCCACGCGCCGTGCGTGGACGGGTGGCTGCGCGACCACGCGACG
TGCCCCATGTGCCGCGCCGACGTCGTCAAGGTCGCCGGAGAGACGACGCCGGCGACGGAG
GAGGAGCCGCCCGTGTAG

Peptide Sequence

PEP ID

Os12t0432600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:13982073:13982902:1 gene:Os12g0432600 transcript:Os12t0432600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0432600-01)
Sequence

MDAPRRRSNGAWEINLVRRSPATARTDRCSRLLLLWSGFVGVVVVLYLFVGHVWASVATA
VLLAAAGWFTWYYFGAAPAPPVLPDHHQPAAPVEARGLSQEDIEAIPAFEYRRGSSGSGV
AQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLRDHATCPMCRADVVKVAGETTPATE
EEPPV

Transcript Sequence

Transcript ID

Os12t0432600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:13982073:13982902:1 gene:Os12g0432600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0432600-01)
Sequence

AACCACGGTTAGCCACATAGTAGTAATTAATCAGCTAGTCAGCTTACACTTGTCTACACG
CGGCGAGCGGCCATGGACGCACCTCGCCGGCGGAGCAACGGCGCGTGGGAGATCAACCTG
GTGCGGCGGAGCCCGGCCACGGCGCGGACCGACCGCTGCTCGAGGCTGCTGCTGCTGTGG
AGCGGGTTCGTCGGCGTCGTCGTCGTGCTCTACCTGTTCGTCGGCCACGTCTGGGCGTCC
GTCGCCACGGCGGTGCTCCTCGCCGCCGCGGGCTGGTTCACCTGGTACTACTTCGGCGCG
GCGCCGGCGCCGCCGGTGCTCCCCGATCATCATCAGCCGGCGGCGCCGGTGGAGGCCCGC
GGGCTCAGCCAGGAGGACATCGAGGCCATCCCGGCGTTCGAGTACAGGAGGGGATCATCG
GGCAGCGGGGTGGCGCAGTGCGCGGTGTGCATCGCCGCCGTGAAGGACGGGGACACGGTG
CGGCGGCTGCCGGCGTGCGGCCACGCGTTCCACGCGCCGTGCGTGGACGGGTGGCTGCGC
GACCACGCGACGTGCCCCATGTGCCGCGCCGACGTCGTCAAGGTCGCCGGAGAGACGACG
CCGGCGACGGAGGAGGAGCCGCCCGTGTAGCCGAGCCCGCGCAAGTTGAGGCATACGACA
AGTCAACAAAACATGCGCCGGAATGGAAACGTGTGCTTCCATCCCTGCTTGTTTCTTTTT
TTTCCACTTCGTTTGACTTTCTGTTTTAAGTGTCAGCTTGGTATAGTATGGATCTGATAT
AGTGTTTACTAGCAAGGTGTATATGCGATACAATTAACAAAAAAGTTGTG