Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0424700-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:13444520:13445604:1 gene:Os12g0424700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDKF-2 description:Serine/threonine protein kinase domain containing protein. (Os12t0424700-00)
Sequence	ATGGAGCGCTACGAGTGTCTCGGCAAGATCGGGGAGGGCGCCGCCGGCGTGGTGCACGTG GCGCGGGACCGGACGACAGGGGAGACCGTCGCCGTGAAGCGCCTCCACGGAGGGATCGGC TGCGGCGAGGAGGAGTGGCTCCGGGAGGCGCGGTGCCTGCAGGCGTGCCGCGGCCACCCG CACCTCGTCGAGCTCCGCGCCGCGCACCGGGAGATGAGGAGGGGCGGCGGCGGCGCGTGC TGCTACGTCGTGATGGAGTACGTCGACGGGCCGAGCCTGTCGCGCGTGGTGCGGGAGGAG CGGCGCGGGAGGCCGTTCCCGGAGGCCGAGGCGCGGCGGCTGATGCGGCAGCTCCTCGAC GGCGTCGCGGCGATGCACGCGGCGGGGGTCATGCACCGGGACCTCAAGCCGGACAACGTC GTCGTCGGCCCCCGCGGCGACCTCAAGATCTGCGACTTCGGCATGTCGCGGGTCACCGCG GCCGGCGCGCCGCCGTACACGTCGCCCGTCGTCACGCTGTGGTACCGCGCGCCGGAGCTC ATTCTGGGGTCGCAGGAGTACGACTCCCTCGTCGACACGTGGTCGCTCGGATGCATCATG GCCGAGCTCCTCGCCGGCGCTCCGCTCTTCCCCGGGAGGTCGGAAATGGACCAGCTGAAC AGGGTGTTCGACACGGTCGGAATGCAGGACATGAAGTCGTGGCCGGGCTTCGCTCGCCTG CCGCGCGCCGAGTCCGCGCTCTGCAGCCGCGCCAGGCCGCCGAGCAGGCTCCGGGAGATG TTCCCCAAGCTGTCCGCCGCCGGGTTCGACGTGCTGAGCGGGCTGCTCGCTTGCCGGCCG GACAGGCGGCTCACCGCGGCGGACGCGCTCCGGTGCGCGTGGTTCACGGAGGCTGACACG CCGCCCGACGCCACGCCGGTCACCTGCGGCAGCGCTCGCTTCACTCCCTGCGTCTCCGGT GTTGCTGACGCAATTGTTGTATAA

Peptide Sequence

PEP ID	Os12t0424700-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:13444520:13445604:1 gene:Os12g0424700 transcript:Os12t0424700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDKF-2 description:Serine/threonine protein kinase domain containing protein. (Os12t0424700-00)
Sequence	MERYECLGKIGEGAAGVVHVARDRTTGETVAVKRLHGGIGCGEEEWLREARCLQACRGHP HLVELRAAHREMRRGGGGACCYVVMEYVDGPSLSRVVREERRGRPFPEAEARRLMRQLLD GVAAMHAAGVMHRDLKPDNVVVGPRGDLKICDFGMSRVTAAGAPPYTSPVVTLWYRAPEL ILGSQEYDSLVDTWSLGCIMAELLAGAPLFPGRSEMDQLNRVFDTVGMQDMKSWPGFARL PRAESALCSRARPPSRLREMFPKLSAAGFDVLSGLLACRPDRRLTAADALRCAWFTEADT PPDATPVTCGSARFTPCVSGVADAIVV

Transcript Sequence

Transcript ID	Os12t0424700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:13444520:13445604:1 gene:Os12g0424700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDKF-2 description:Serine/threonine protein kinase domain containing protein. (Os12t0424700-00)
Sequence	CACACGACTCCACCACCAACCACAAGCCGCCTCTCCCACACCCCCGGACCCCGTCGCCGC CGCCGTGGCCTCGCACGCGCACGCACACGCCATGGAGCGCTACGAGTGTCTCGGCAAGAT CGGGGAGGGCGCCGCCGGCGTGGTGCACGTGGCGCGGGACCGGACGACAGGGGAGACCGT CGCCGTGAAGCGCCTCCACGGAGGGATCGGCTGCGGCGAGGAGGAGTGGCTCCGGGAGGC GCGGTGCCTGCAGGCGTGCCGCGGCCACCCGCACCTCGTCGAGCTCCGCGCCGCGCACCG GGAGATGAGGAGGGGCGGCGGCGGCGCGTGCTGCTACGTCGTGATGGAGTACGTCGACGG GCCGAGCCTGTCGCGCGTGGTGCGGGAGGAGCGGCGCGGGAGGCCGTTCCCGGAGGCCGA GGCGCGGCGGCTGATGCGGCAGCTCCTCGACGGCGTCGCGGCGATGCACGCGGCGGGGGT CATGCACCGGGACCTCAAGCCGGACAACGTCGTCGTCGGCCCCCGCGGCGACCTCAAGAT CTGCGACTTCGGCATGTCGCGGGTCACCGCGGCCGGCGCGCCGCCGTACACGTCGCCCGT CGTCACGCTGTGGTACCGCGCGCCGGAGCTCATTCTGGGGTCGCAGGAGTACGACTCCCT CGTCGACACGTGGTCGCTCGGATGCATCATGGCCGAGCTCCTCGCCGGCGCTCCGCTCTT CCCCGGGAGGTCGGAAATGGACCAGCTGAACAGGGTGTTCGACACGGTCGGAATGCAGGA CATGAAGTCGTGGCCGGGCTTCGCTCGCCTGCCGCGCGCCGAGTCCGCGCTCTGCAGCCG CGCCAGGCCGCCGAGCAGGCTCCGGGAGATGTTCCCCAAGCTGTCCGCCGCCGGGTTCGA CGTGCTGAGCGGGCTGCTCGCTTGCCGGCCGGACAGGCGGCTCACCGCGGCGGACGCGCT CCGGTGCGCGTGGTTCACGGAGGCTGACACGCCGCCCGACGCCACGCCGGTCACCTGCGG CAGCGCTCGCTTCACTCCCTGCGTCTCCGGTGTTGCTGACGCAATTGTTGTATAAACAAG TTAGA