Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0421000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:13177329:13178929:1 gene:Os12g0421000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barley stem rust resistance protein. (Os12t0421000-01)
Sequence	ATGTCGAAGAAAATTGTGGTGAAGCTGGACCTGCATGACAACAAGGACAAGCAGAAGGCC ATGAAGGCCGTCTCCTCGGTTATCGGAATCGACGCCATTTCGATGGACATGGCGTCGCGG AAGATGACGGTGATCGGCACGGTGGATCCGGTGGACGTGGTGAGCAAGCTCCGCAAGGCG TCGTGGGCGGCCTACATCGAGTCGGTCGGACCGGCCAAGGAGCCGGAGAAGAAGGAGGAG AAGAAGGAGGAGGCCAAGAAGGACGCCGGCGGCGGCGGCGGCGACGGCAAGAAGGAAGGA GGTGACGGCAAGAAGGAGGAGGGCGGCGACGGCAAGAAGGAGGGGGAAGGCAAGAAGGAA GGCGACGGCGGCGGCGACAAGAAGGAGGGCGAAGGCAAGAAGGAAGGCGACGGCGGCGGC GACAAGAAGGACGGCAACGGCGACGGCAAGAAGGAGGGCGACGCGAAGGCCGCCAAGAAG GAGGAAGGCGGCGGCGGCGGCGGCGACGGCGGAGGGAAGAAACCAGCCGCGGTGGCGCCG ATGCCGATGCCGATGCCGCTGCACCACCTCCCACCGCAGTACTTCAACATGGAGTACATG AACCAGTATCACCGGCCGCCGCCGCCGCCGCCGGCCTACCCGTACGTGCCGCCGCCGCAG TACTACTACGTCCGCAACATGAGCATGGAGGAGAACCCCAACTCGTGCGCCATTTGCTGA

Peptide Sequence

PEP ID	Os12t0421000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:13177329:13178929:1 gene:Os12g0421000 transcript:Os12t0421000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barley stem rust resistance protein. (Os12t0421000-01)
Sequence	MSKKIVVKLDLHDNKDKQKAMKAVSSVIGIDAISMDMASRKMTVIGTVDPVDVVSKLRKA SWAAYIESVGPAKEPEKKEEKKEEAKKDAGGGGGDGKKEGGDGKKEEGGDGKKEGEGKKE GDGGGDKKEGEGKKEGDGGGDKKDGNGDGKKEGDAKAAKKEEGGGGGGDGGGKKPAAVAP MPMPMPLHHLPPQYFNMEYMNQYHRPPPPPPAYPYVPPPQYYYVRNMSMEENPNSCAIC

Transcript Sequence

Transcript ID	Os12t0421000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:13177329:13178929:1 gene:Os12g0421000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Barley stem rust resistance protein. (Os12t0421000-01)
Sequence	ACGATGATCTCTACTGGTAGTATCACGGACGGCACAATCAACGGCGGGCGCTTCAAAAAC GTGAAGGGAAGTGGGAGTATTTAGGACCCTTCCCAGCAATCTCACCCATCCCTCCCCTTC CCCTGCTTCGGCAGCTGCTGGTGTGGTGATACACTCGCCTAGCTTTGGCCACCACTAATC TCTGCTCTGCTTTTTCTCCTCTGCTCCACTGATCATCCAATTCTTCTCTTCCTGATTGGC CATTCTGATTGGCTGGTGACATGTCGAAGAAAATTGTGGTGAAGCTGGACCTGCATGACA ACAAGGACAAGCAGAAGGCCATGAAGGCCGTCTCCTCGGTTATCGGAATCGACGCCATTT CGATGGACATGGCGTCGCGGAAGATGACGGTGATCGGCACGGTGGATCCGGTGGACGTGG TGAGCAAGCTCCGCAAGGCGTCGTGGGCGGCCTACATCGAGTCGGTCGGACCGGCCAAGG AGCCGGAGAAGAAGGAGGAGAAGAAGGAGGAGGCCAAGAAGGACGCCGGCGGCGGCGGCG GCGACGGCAAGAAGGAAGGAGGTGACGGCAAGAAGGAGGAGGGCGGCGACGGCAAGAAGG AGGGGGAAGGCAAGAAGGAAGGCGACGGCGGCGGCGACAAGAAGGAGGGCGAAGGCAAGA AGGAAGGCGACGGCGGCGGCGACAAGAAGGACGGCAACGGCGACGGCAAGAAGGAGGGCG ACGCGAAGGCCGCCAAGAAGGAGGAAGGCGGCGGCGGCGGCGGCGACGGCGGAGGGAAGA AACCAGCCGCGGTGGCGCCGATGCCGATGCCGATGCCGCTGCACCACCTCCCACCGCAGT ACTTCAACATGGAGTACATGAACCAGTATCACCGGCCGCCGCCGCCGCCGCCGGCCTACC CGTACGTGCCGCCGCCGCAGTACTACTACGTCCGCAACATGAGCATGGAGGAGAACCCCA ACTCGTGCGCCATTTGCTGATCGAAAAAAAAAAACGCCATGGCAAATGAGCACCATGAAT GCTTTGCATCTCAATGCATGATCTGTGTGCACTTCTGCAGCAGGTAGGCGACGCGTGCGT GCGTACACGCTTGTGTTCTTGATCGATCGGCCGTGATGTGTATAGTATAAGATCTCAGTG TTTATGATGAGAAGAACAAATTAAGTTTGCGTGATCGAACCAGTACGTACATAGTAGTAA GTTCGTTTTTTTTTTCTTTTCGACAAATTCAACCAACCTCTTCATCGGTGGATATATCCG GTTAATGAAATATATGATGAGACCAAC