Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0420400-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:13115368:13117325:1 gene:Os12g0420400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM I SUBUNIT description:Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-01);Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-02);Similar to Photosystem I reaction center subunit XI, chloroplastic. (Os12t0420400-03)
Sequence	ATGGCCACTGCTTATGCTCCCATGGCGAGCCAGCTGATGAAGAGCAGCTTGGTGTGCTCC AAGCCGAGGGGGCTGTCTGGTGCTTCGCTGACAAGGAGGCCCCGCTTCACAGTCAAGGCC ATCCAGTCTGAGAAGCCAACGTACCAGGTGGTGCAGCCCATCAATGGCGACCCCTTCATC GGCAGCCTGGAGACGCCGGTGACCTCCAGCCCGCTGGTCGCCTGGTACCTCTCCAACCTC CCGGCGTACCGCACCGCCGTCAGCCCGCTGCTCCGCGGCATCGAGGTCGGCCTCGCCCAC GGCTACCTCCTCGTCGGGCCCTTCGCGCTCACCGGCCCGCTCCGCAACACGCCGGTGCAC GGCCAGGCCGGCGCCCTCGGCGCCGCAGGCCTCGTCGCCATCCTCAGCGTCTGCCTCACC ATGTACGGCGTCGCCTCCTTCGGCGAGGGCGAGCCGTCCACGGCGCCGACGCTGACGCTC ACCGGCCGCAAGAAGGAGGCCGACAAGCTGCAGACCGCCGACGGCTGGGCCAAGTTCACC GGCGGCTTCTTCTTCGGCGGCATCTCCGGCGTCCTCTGGGCCTACTTCCTCCTCTACGTG CTCGACCTCCCGTACTTCTTCAAGTAG

Peptide Sequence

PEP ID	Os12t0420400-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:13115368:13117325:1 gene:Os12g0420400 transcript:Os12t0420400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM I SUBUNIT description:Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-01);Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-02);Similar to Photosystem I reaction center subunit XI, chloroplastic. (Os12t0420400-03)
Sequence	MATAYAPMASQLMKSSLVCSKPRGLSGASLTRRPRFTVKAIQSEKPTYQVVQPINGDPFI GSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVH GQAGALGAAGLVAILSVCLTMYGVASFGEGEPSTAPTLTLTGRKKEADKLQTADGWAKFT GGFFFGGISGVLWAYFLLYVLDLPYFFK

Transcript Sequence

Transcript ID	Os12t0420400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:13115368:13117325:1 gene:Os12g0420400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOTOSYSTEM I SUBUNIT description:Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-01);Similar to Photosystem I reaction center subunit XI, chloroplast precursor (PSI- L) (PSI subunit V). (Os12t0420400-02);Similar to Photosystem I reaction center subunit XI, chloroplastic. (Os12t0420400-03)
Sequence	AGTTGCCAAGAAGGCTGTTTCACATCCATTTTTTTTGGCCGGGAGAGAGAGCATCTAGCT AGGGAGAGAAAGGAAGAGACGAGAGGAGAGAGATGGCCACTGCTTATGCTCCCATGGCGA GCCAGCTGATGAAGAGCAGCTTGGTGTGCTCCAAGCCGAGGGGGCTGTCTGGTGCTTCGC TGACAAGGAGGCCCCGCTTCACAGTCAAGGCCATCCAGTCTGAGAAGCCAACGTACCAGG TGGTGCAGCCCATCAATGGCGACCCCTTCATCGGCAGCCTGGAGACGCCGGTGACCTCCA GCCCGCTGGTCGCCTGGTACCTCTCCAACCTCCCGGCGTACCGCACCGCCGTCAGCCCGC TGCTCCGCGGCATCGAGGTCGGCCTCGCCCACGGCTACCTCCTCGTCGGGCCCTTCGCGC TCACCGGCCCGCTCCGCAACACGCCGGTGCACGGCCAGGCCGGCGCCCTCGGCGCCGCAG GCCTCGTCGCCATCCTCAGCGTCTGCCTCACCATGTACGGCGTCGCCTCCTTCGGCGAGG GCGAGCCGTCCACGGCGCCGACGCTGACGCTCACCGGCCGCAAGAAGGAGGCCGACAAGC TGCAGACCGCCGACGGCTGGGCCAAGTTCACCGGCGGCTTCTTCTTCGGCGGCATCTCCG GCGTCCTCTGGGCCTACTTCCTCCTCTACGTGCTCGACCTCCCGTACTTCTTCAAGTAGA TCTTTTGTTTGTAAGTGCATGACCGGGTGATGCATGTGTAGATCGATCGATGATGGAACA TGTGTGTGTTCATGTGGTGGCTGATTTGAGTGCCTTCTACTTGTATAAATGAAATGCATC TGCACAAGGGCACAAACAGGCTGCCTGCATGGATATATGGATGGTGTGCTGTTGTAACTT GGGAGTGTTACTTTCTTACTTTGCAGATAATTTAAAATGGAAAGAAAAAGTTTTAACAAT GATAATTAATCAGTTTGTTGTAATT