Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0420100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:13099651:13102786:1 gene:Os12g0420100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 38 description:Similar to Beta-glucosidase. (Os12t0420100-01)
Sequence

ATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCATGGCAAC
GGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCG
TCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTATGGCCGAGGGCCCTGCATCTGG
GACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTC
GACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCG
TATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAA
GACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCA
TATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGG
CTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATAT
GGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGC
TACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCC
GCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGG
ACATATCGTGACAAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTT
GTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGG
GAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATATGGTCATTACCCAGAAACTATG
CAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAA
GGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTC
AACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAAC
GGTGTGCCAATTGGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATC
TACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAA
AATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGG
ATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGG
GTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTCGGGTTCACT
TCAAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCA
ACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGA

Peptide Sequence

PEP ID

Os12t0420100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:13099651:13102786:1 gene:Os12g0420100 transcript:Os12t0420100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 38 description:Similar to Beta-glucosidase. (Os12t0420100-01)
Sequence

MNMPLLLLIAIVVVSLSHGNGEQTDLTRETFPAGFVFGTASSAYQVEGNALQYGRGPCIW
DTFLMQPGVTPDNSTANVTVDEYHRYMDDVDNMVRVGFDAYRFSISWSRIFPSGLGKINK
DGVDYYHRLIDYMLANNIIPYVVLYHYDLPQVLHDQYKGWLHPRIVRDFVRFADFCFKTY
GHKVKNWFTINEPRMMANHGYGDGFFPPGRCTGCQPGGNSATEPYIAAHNLLLSHAAAVR
TYRDKYQAIQKGKIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWYLHPITYGHYPETM
QNAVKERLPNFTREQSEMIKGSADYIAINHYTTYYVSHHVNKTSISYLNDWDVKISYERN
GVPIGKQAYSNWLYVVPWGIYKAVMHVKEKYKDPIIIIGENGIDQPGNETLPGALYDFFR
IQYFDQYLHELKRAIKDGARVTGYFAWSLLDNFEWRLGFTSKFGIVYVDRSTFTRYPKDS
TRWFRKMIKSEV

Transcript Sequence

Transcript ID

Os12t0420100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:13099651:13102786:1 gene:Os12g0420100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GLUCOSIDASE 38 description:Similar to Beta-glucosidase. (Os12t0420100-01)
Sequence

CTCACCGCCGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCA
TCGTCGTCGTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGT
TCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCC
TCCAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTC
CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGG
ACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTT
TCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTG
ATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCAC
AGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGA
GATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTA
ACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGAT
GCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACC
TTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGACAAGTACCAGGCTATTCAGA
AGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAG
AGGATCACGCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGA
TTACATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATT
TCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATT
ACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATT
GGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATTGGGAAACAGGCGTACTCGA
ACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGT
ACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCC
TACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGC
TTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTG
ACAACTTCGAGTGGCGGCTCGGGTTCACTTCAAAATTCGGAATCGTCTATGTAGACCGGA
GCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTG
AGGTTTGAGTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTA
GTTTTGGTTGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGT
ACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAA
TAGATTCAGGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTG
AATTGCCCATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTTTAAACTTTGG