Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0417000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12873432:12876080:1 gene:Os12g0417000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os12t0417000-01)
Sequence	TTGTTGAAGCAAACAAACCTAAGACGAAAAACAATGGAAAAGGCAAGAGGAAGGTCTAAA GAAAAGGTTATCAATGGAATGGCAGTTGGAAAGAATAAGGAAAACACTCTTACTGATTAT GAAATACGTCGCAAAGGTGTCATAGCAGCAAACAATGAGATGTTACAATCTCTAAACCTC CCGCCCATGGGCAGCAATACGCATGTTCAACAACGACCCAAGAAAATACCTAAGGTAACT GATGGTAGAAACATGGTGCCATGTGGAGATCATAACTTGCGGTCTAGGTCAAGAAATAAC CTAGAGGAAAATGTAGATGAAAATGTTGGCGATGATCCTGAATACCAACTAGAAGAAGAT GCCATGGATGACAATGAAGTAGATGTAGAAGAAACTCTTGAACTTGAAAAAGTTCAGCAG AAAAAGAAGGAAGGAAGGGGTATCACTCAAAAGCTCAACATAATTTCAAGGGTGGGTGAA GCTAAAATCAAAATTACTCTCAACGAATTTGGTCAGCCGGTGGGGCTTGATTCTGAGGAA TTTGCCACTACTTTTGGGACATTTGTGAGAAAGAAAATACCTGTTGCATGTGGTGATTGG AGAGATGTTGACGTCAAAGACAAGCTGAAAGTATGGGAAGATGTACAGAAACATTATGAG ATCAATGAATATGGTTTACATTTTGTGTTGGAGACATCACATATGATATGGAAGGATTAT AAGGCTGATTTGAAGAAGAAACATTTTGATGCAAATCTGACTGATGAGGAACTTATGGAC AGACGTGACTTAAGAGTCAACGAGGCACAATGGAAGTGGCTTATTAACCATTGGAGATCT CCAGAAGCTGTGGCCCGCTCCATAAGAGGCAAGGCAAATCGCGGAATGTTGCGCATGTTA CATACAGCTGGTAGCAAGAGCCACGCTCGTGTTGGCCATGACATGGGTGTGAAAACTGGG CGTCCTCCTAGAAGGGATGAAGTCTTTGTTGAAACGCACAAACGAAAAAATGGAGAAATT ATTCCAGAGGCTGCAGAAACAGTTGAAATGCTAAAAGAGGCTGCAGAAGTTAACCCAGAG TTGAAGAACAAAACAATCCAGGAGGGCGATTTGTATTCACGTGTTTGTGGAACCAAGGAA CCAAGAGGCCGTGTTCGTGTTTTAGGAAAGGGACCAACTCCTCAGGATGTGGGCACACCA GGAACACGTAGCAGAATGCCAACAAGACTTCAGCTAGAAATAGAATCTCATCGACAGACC AAACAAGAAGTTGTATGTCTGAATAAACGCATGGACGACATGCAACAACGTTTTAACATA ATGGAGCATATGGTTATGTCTCAAGGTGTGCAGAATATAGAAACAAGTTCCCATCATGCT TCTAATTCTCGACATGCTGAGAGCCCAAGGAGTCCAGTACTTGAAGAGCTGCATCCTAAT GAGCCTACCAATAGGCACTTGCTGGAGGAGCCTCATGCTGAGCCTACCAGTAGGCACTTG GATAATATCCTATCGGGTGATGACTTTATTATCCGCAAAAAAGCTATAACGCCAAGGGTG CCCTCAAGAAACACAGCCACAGGAAGCCATGAAGCCACCATTGCTGAAGGAGAAAATCTT GTTGGTAAAGATGTTATCTTATATGCTGTCTTGAGATCTGACACCCCTGTGGCTAAAGCA ACAATTGTATCAATTCATCCAAGTTCCTTGGTGGGAGGTCAACCTCTAGGTGTTGAATTC TATGAAGTTGTTGTCAATGTCGTGCTTAAAAGAGATGCATTGCTTCCTCGTCCATATGAT GATATGCAAACTATG

Peptide Sequence

PEP ID	Os12t0417000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12873432:12876080:1 gene:Os12g0417000 transcript:Os12t0417000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os12t0417000-01)
Sequence	LLKQTNLRRKTMEKARGRSKEKVINGMAVGKNKENTLTDYEIRRKGVIAANNEMLQSLNL PPMGSNTHVQQRPKKIPKVTDGRNMVPCGDHNLRSRSRNNLEENVDENVGDDPEYQLEED AMDDNEVDVEETLELEKVQQKKKEGRGITQKLNIISRVGEAKIKITLNEFGQPVGLDSEE FATTFGTFVRKKIPVACGDWRDVDVKDKLKVWEDVQKHYEINEYGLHFVLETSHMIWKDY KADLKKKHFDANLTDEELMDRRDLRVNEAQWKWLINHWRSPEAVARSIRGKANRGMLRML HTAGSKSHARVGHDMGVKTGRPPRRDEVFVETHKRKNGEIIPEAAETVEMLKEAAEVNPE LKNKTIQEGDLYSRVCGTKEPRGRVRVLGKGPTPQDVGTPGTRSRMPTRLQLEIESHRQT KQEVVCLNKRMDDMQQRFNIMEHMVMSQGVQNIETSSHHASNSRHAESPRSPVLEELHPN EPTNRHLLEEPHAEPTSRHLDNILSGDDFIIRKKAITPRVPSRNTATGSHEATIAEGENL VGKDVILYAVLRSDTPVAKATIVSIHPSSLVGGQPLGVEFYEVVVNVVLKRDALLPRPYD DMQTM

Transcript Sequence

Transcript ID	Os12t0417000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12873432:12876080:1 gene:Os12g0417000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposase, Ptta/En/Spm, plant domain containing protein. (Os12t0417000-01)
Sequence	CATAGATGGAATAATTGTTGAAGCAAACAAACCTAAGACGAAAAACAATGGAAAAGGCAA GAGGAAGGTCTAAAGAAAAGGTTATCAATGGAATGGCAGTTGGAAAGAATAAGGAAAACA CTCTTACTGATTATGAAATACGTCGCAAAGGTGTCATAGCAGCAAACAATGAGATGTTAC AATCTCTAAACCTCCCGCCCATGGGCAGCAATACGCATGTTCAACAACGACCCAAGAAAA TACCTAAGGTAACTGATGGTAGAAACATGGTGCCATGTGGAGATCATAACTTGCGGTCTA GGTCAAGAAATAACCTAGAGGAAAATGTAGATGAAAATGTTGGCGATGATCCTGAATACC AACTAGAAGAAGATGCCATGGATGACAATGAAGTAGATGTAGAAGAAACTCTTGAACTTG AAAAAGTTCAGCAGAAAAAGAAGGAAGGAAGGGGTATCACTCAAAAGCTCAACATAATTT CAAGGGTGGGTGAAGCTAAAATCAAAATTACTCTCAACGAATTTGGTCAGCCGGTGGGGC TTGATTCTGAGGAATTTGCCACTACTTTTGGGACATTTGTGAGAAAGAAAATACCTGTTG CATGTGGTGATTGGAGAGATGTTGACGTCAAAGACAAGCTGAAAGTATGGGAAGATGTAC AGAAACATTATGAGATCAATGAATATGGTTTACATTTTGTGTTGGAGACATCACATATGA TATGGAAGGATTATAAGGCTGATTTGAAGAAGAAACATTTTGATGCAAATCTGACTGATG AGGAACTTATGGACAGACGTGACTTAAGAGTCAACGAGGCACAATGGAAGTGGCTTATTA ACCATTGGAGATCTCCAGAAGCTGTGGCCCGCTCCATAAGAGGCAAGGCAAATCGCGGAA TGTTGCGCATGTTACATACAGCTGGTAGCAAGAGCCACGCTCGTGTTGGCCATGACATGG GTGTGAAAACTGGGCGTCCTCCTAGAAGGGATGAAGTCTTTGTTGAAACGCACAAACGAA AAAATGGAGAAATTATTCCAGAGGCTGCAGAAACAGTTGAAATGCTAAAAGAGGCTGCAG AAGTTAACCCAGAGTTGAAGAACAAAACAATCCAGGAGGGCGATTTGTATTCACGTGTTT GTGGAACCAAGGAACCAAGAGGCCGTGTTCGTGTTTTAGGAAAGGGACCAACTCCTCAGG ATGTGGGCACACCAGGAACACGTAGCAGAATGCCAACAAGACTTCAGCTAGAAATAGAAT CTCATCGACAGACCAAACAAGAAGTTGTATGTCTGAATAAACGCATGGACGACATGCAAC AACGTTTTAACATAATGGAGCATATGGTTATGTCTCAAGGTGTGCAGAATATAGAAACAA GTTCCCATCATGCTTCTAATTCTCGACATGCTGAGAGCCCAAGGAGTCCAGTACTTGAAG AGCTGCATCCTAATGAGCCTACCAATAGGCACTTGCTGGAGGAGCCTCATGCTGAGCCTA CCAGTAGGCACTTGGATAATATCCTATCGGGTGATGACTTTATTATCCGCAAAAAAGCTA TAACGCCAAGGGTGCCCTCAAGAAACACAGCCACAGGAAGCCATGAAGCCACCATTGCTG AAGGAGAAAATCTTGTTGGTAAAGATGTTATCTTATATGCTGTCTTGAGATCTGACACCC CTGTGGCTAAAGCAACAATTGTATCAATTCATCCAAGTTCCTTGGTGGGAGGTCAACCTC TAGGTGTTGAATTCTATGAAGTTGTTGTCAATGTCGTGCTTAAAAGAGATGCATTGCTTC CTCGTCCATATGATGATATGCAAACTATG