Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0416800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:12864424:12866177:1 gene:Os12g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0416800-01)
Sequence

ATGGAGAAGGGGAGGAGGCGGCACATCCCGGCATTCGGTGAGTGGAACCAGCAATGCGAG
GAGCTGCCAATCACGCAGTACTTCGATTCGGCGATGGAACAAGGCCTCGTCGTCACGGCC
GGACACTACTACCACGCCACTGCCGGCGAGTTGCTCTTCAAGGTCGCCGGCTCACCGCCT
CCCCAGAAGCCACCCAAGAAAGTGAGGAGCACAAAGAATGGGATGGAGAACCAGGCGGCG
AGGAGGAGGGATGGGCCATCTGTTGTTGTTGATGGTGGGGTAGTTGTCCATGGATCGAGG
AGGCCTAGGGTTGTTAGGGCAGTTGACGAGGACTTGTACAAAGTCCCCTCTGAACTCCTC
CGCAAGAAGGCAAAAGGGAGGAAGCATGTGAGAAGCTTGTGGATGGGCTGTGTAGGACTC
AATTGCGTCGCCTGA

Peptide Sequence

PEP ID

Os12t0416800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:12864424:12866177:1 gene:Os12g0416800 transcript:Os12t0416800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0416800-01)
Sequence

MEKGRRRHIPAFGEWNQQCEELPITQYFDSAMEQGLVVTAGHYYHATAGELLFKVAGSPP
PQKPPKKVRSTKNGMENQAARRRDGPSVVVDGGVVVHGSRRPRVVRAVDEDLYKVPSELL
RKKAKGRKHVRSLWMGCVGLNCVA

Transcript Sequence

Transcript ID

Os12t0416800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:12864424:12866177:1 gene:Os12g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0416800-01)
Sequence

ATGTTTTTTCCATCTGATTATCAGAAGCATCTTCTTCCTCGCCCACATCCTCATACACCC
TTTTCGGTTACTGACCATCAAATCTCAATCTAGCTCATCTACAGGTCAAAAATGGAGAAG
GGGAGGAGGCGGCACATCCCGGCATTCGGTGAGTGGAACCAGCAATGCGAGGAGCTGCCA
ATCACGCAGTACTTCGATTCGGCGATGGAACAAGGCCTCGTCGTCACGGCCGGACACTAC
TACCACGCCACTGCCGGCGAGTTGCTCTTCAAGGTCGCCGGCTCACCGCCTCCCCAGAAG
CCACCCAAGAAAGTGAGGAGCACAAAGAATGGGATGGAGAACCAGGCGGCGAGGAGGAGG
GATGGGCCATCTGTTGTTGTTGATGGTGGGGTAGTTGTCCATGGATCGAGGAGGCCTAGG
GTTGTTAGGGCAGTTGACGAGGACTTGTACAAAGTCCCCTCTGAACTCCTCCGCAAGAAG
GCAAAAGGGAGGAAGCATGTGAGAAGCTTGTGGATGGGCTGTGTAGGACTCAATTGCGTC
GCCTGAATCATAAAGAAGATGCAATCTACAAGGCTACGCATGGCAACATTGTTCAACTGT
ACCGAGAAAGCCTCACAATATATATGTGGACCGATTGGCCTTTATTTTGTGGTTGAAGAC
GTTTGTCCAGACTGCAGTCTGGGGTGCAAGCAACTGTTGCTTGCACCTAGTGAAAATTTG
TTACTGCCATATATGTAAATTATCTAGGAAAACGAATGGTAGATGATCTGAAGCTAGCTA
GCTAATCTAATTTGCAGAGCCTTGCTGCTTGCCGTGGCTCTTCATCAGCCGTGGTAGAAC
GCTCTCGAGCTTTGTGCGACACTAGCTAGTGCCCCTTCATCGTTCTACGTGGGGAGCTTT
TGTTTTTTTACTTGGTCCGTCTTGGCAATTTGGCATGCATGTAGGACGGACACTGTGATG
CCGTCTAGACCTCTTGGAGGGGGGGACAAGTTGTCAGAGATGCGACTTCACTTACATAAT
AAGATCATAGTGGAGAGAACTTTC