Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0414500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12762896:12765776:-1 gene:Os12g0414500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoacyl-tRNA synthetase, class II (D, K and N)-like domain containing protein. (Os12t0414500-01)
Sequence	ATGGCGGCCTCCTCCTCCTCCACGTCGTTCTCTTCGTCTTCGTCCCACGAAGGAGACGCG GGCTCGTCGTACATAGAGTGCTTCAAGTACTCGAGGCGCGCCACGCTCCGCTCCGTCGTT GGCCGCCCCGACGGCGGCGCCGGGCTGGTCGGGGAGCGCGCGGTGGTCGGCGGATGGGTG AGGTCGTCCGCCGTCGTCAGGGCGAGGCGCGCTGCTGCTGGCCCCGCGTCGCCGTCGAGG AAGCCCGAGGTGGAGGCCACCGGGCTGACGTGCACGGAGGTGCTCATGTCCAGGGTGCCA CTCATCCGCTGCATCGCCAGGCTCATGGCCGGTGGGATCACCGCCGCCGCCTCGGCGGGC GGATCCGCTCGCCGGCCGGCCGTCGGCACGGCGCTGGTGCGCATCAACGACGGCTCCTGC GTGGCTGATCTCCAGATAGTTGTGGACTCTGCACTGTTGCCTCTTGATCAAATCACCGCT ACTGGAGCTTGTGTTCTTGTGGAAGGCAAGATAGAGCAGGTGGAAGGGACATTGCCGCAG TATGTTGTGCAGATGAAGGTGGAGAAGATTCTGCACATTGGTCCTGTGGATTCAGAGAAG TACCCTAGGTCGAATGCTCATTCATCTCCGGATCTTGTCAGGGGCTACCCGCATCTCGCT GCTCGTACAGCGACGGTTGCATCAACTGCTCGTGTACGGAGTGAATTGGTCCATGCTGTC CACGCATTTTTCCAATCCAACGGATTCTTCCATGTGAATACACCCACGATAACAACAACA ACAGCAACCAGTGCAGGAAACCGCGGCAAAATGTTACGATTAACCCGCCTTTTCAGCAAA TCAGACAATGGCAATAGGATCACACCTGAAGCTGTCAGGGCTGCCATCAAGGAGAAGACG AAACAAGTTGAAGCACTAAAGAGAAGCGAAAGCAACAAAGAAGCCCTCGAAGCTGCAGAG CAGGATCTTCAGAGGGCAAATGCTCTTTCAAGGCAGCTCGAGCAAGGAGCAAGTGCAGAG TCCTCCCAAGATGAGTTCTTTCACCGCCCAGCCTACCTGACACCTTGCCATACACTTCAT CTCGAGACATACGCCTGTGCACTCAGCAGCGTCTACACATTCAGCCCGGTGTTCCAGGCT GAGAGTGAGAGCTTGGATTCAGACAGGTCTCTGGCTGAGAGGTGGACAGTCGATGTCGAG CTCGCTTTCGCCGAGCTTGAGGATGCAATCTCCTGCGCCGAGGATTGTGTGAAGTCACTC TGCAGCACGGTGTCGAAAGATTGTTCAGATGAGCTGAAGTTTCTGTCGTCCAATCAGGCA GGTGATGCCACTAGTAGCGTTATTGAAGCTGCAGTGTCAAGCCCCTGGCAAAAGATTAAG TACACTGAAGCTGTCAATACTCTTCTTCAGGTCACGGATAAAACTTTTGAATCGAAACTT GAGTTGGGCATGCCACTGTCTCGTGTGCATCTGAGTTATCTGGCTGATGATTTATACAAG AAGCCAGTAATCATATATGATTACCCGAAACAGCTAAAGCCATTTTATGCACGCCTGAAG GAAGACCTGAAGACAGTCTCTGCCTTTGACTTAGTTGTGCCAAAGGTTGGCATCGTAGCA TGTGGAGCTCAGAAGGAGGAAAGGATGGATAATTTAACCTCAAGGATTGAGGAGTCAGGG CTGCAGGTTGAGCAGCTGGAATGGTATTTGGACACACGCAGACATGGCACTGTAAAGCAC TCTGGTTTCAGCATAGACTTGGAGAGCCTCATCTTATTTGTCACCGGCCTCAAGGATGTC CGAGACGCCATCCCCTTCCATCGAACCAAAGGTCATGCAAAATGTTAG

Peptide Sequence

PEP ID	Os12t0414500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12762896:12765776:-1 gene:Os12g0414500 transcript:Os12t0414500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoacyl-tRNA synthetase, class II (D, K and N)-like domain containing protein. (Os12t0414500-01)
Sequence	MAASSSSTSFSSSSSHEGDAGSSYIECFKYSRRATLRSVVGRPDGGAGLVGERAVVGGWV RSSAVVRARRAAAGPASPSRKPEVEATGLTCTEVLMSRVPLIRCIARLMAGGITAAASAG GSARRPAVGTALVRINDGSCVADLQIVVDSALLPLDQITATGACVLVEGKIEQVEGTLPQ YVVQMKVEKILHIGPVDSEKYPRSNAHSSPDLVRGYPHLAARTATVASTARVRSELVHAV HAFFQSNGFFHVNTPTITTTTATSAGNRGKMLRLTRLFSKSDNGNRITPEAVRAAIKEKT KQVEALKRSESNKEALEAAEQDLQRANALSRQLEQGASAESSQDEFFHRPAYLTPCHTLH LETYACALSSVYTFSPVFQAESESLDSDRSLAERWTVDVELAFAELEDAISCAEDCVKSL CSTVSKDCSDELKFLSSNQAGDATSSVIEAAVSSPWQKIKYTEAVNTLLQVTDKTFESKL ELGMPLSRVHLSYLADDLYKKPVIIYDYPKQLKPFYARLKEDLKTVSAFDLVVPKVGIVA CGAQKEERMDNLTSRIEESGLQVEQLEWYLDTRRHGTVKHSGFSIDLESLILFVTGLKDV RDAIPFHRTKGHAKC

Transcript Sequence

Transcript ID	Os12t0414500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12762896:12765776:-1 gene:Os12g0414500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aminoacyl-tRNA synthetase, class II (D, K and N)-like domain containing protein. (Os12t0414500-01)
Sequence	AATCCCAATCAAACCAGCAAACCAACCAAGAATTTCAGTTTCAACCAGCCACTGTACTTC AGCCAGCCATGGCGGCCTCCTCCTCCTCCACGTCGTTCTCTTCGTCTTCGTCCCACGAAG GAGACGCGGGCTCGTCGTACATAGAGTGCTTCAAGTACTCGAGGCGCGCCACGCTCCGCT CCGTCGTTGGCCGCCCCGACGGCGGCGCCGGGCTGGTCGGGGAGCGCGCGGTGGTCGGCG GATGGGTGAGGTCGTCCGCCGTCGTCAGGGCGAGGCGCGCTGCTGCTGGCCCCGCGTCGC CGTCGAGGAAGCCCGAGGTGGAGGCCACCGGGCTGACGTGCACGGAGGTGCTCATGTCCA GGGTGCCACTCATCCGCTGCATCGCCAGGCTCATGGCCGGTGGGATCACCGCCGCCGCCT CGGCGGGCGGATCCGCTCGCCGGCCGGCCGTCGGCACGGCGCTGGTGCGCATCAACGACG GCTCCTGCGTGGCTGATCTCCAGATAGTTGTGGACTCTGCACTGTTGCCTCTTGATCAAA TCACCGCTACTGGAGCTTGTGTTCTTGTGGAAGGCAAGATAGAGCAGGTGGAAGGGACAT TGCCGCAGTATGTTGTGCAGATGAAGGTGGAGAAGATTCTGCACATTGGTCCTGTGGATT CAGAGAAGTACCCTAGGTCGAATGCTCATTCATCTCCGGATCTTGTCAGGGGCTACCCGC ATCTCGCTGCTCGTACAGCGACGGTTGCATCAACTGCTCGTGTACGGAGTGAATTGGTCC ATGCTGTCCACGCATTTTTCCAATCCAACGGATTCTTCCATGTGAATACACCCACGATAA CAACAACAACAGCAACCAGTGCAGGAAACCGCGGCAAAATGTTACGATTAACCCGCCTTT TCAGCAAATCAGACAATGGCAATAGGATCACACCTGAAGCTGTCAGGGCTGCCATCAAGG AGAAGACGAAACAAGTTGAAGCACTAAAGAGAAGCGAAAGCAACAAAGAAGCCCTCGAAG CTGCAGAGCAGGATCTTCAGAGGGCAAATGCTCTTTCAAGGCAGCTCGAGCAAGGAGCAA GTGCAGAGTCCTCCCAAGATGAGTTCTTTCACCGCCCAGCCTACCTGACACCTTGCCATA CACTTCATCTCGAGACATACGCCTGTGCACTCAGCAGCGTCTACACATTCAGCCCGGTGT TCCAGGCTGAGAGTGAGAGCTTGGATTCAGACAGGTCTCTGGCTGAGAGGTGGACAGTCG ATGTCGAGCTCGCTTTCGCCGAGCTTGAGGATGCAATCTCCTGCGCCGAGGATTGTGTGA AGTCACTCTGCAGCACGGTGTCGAAAGATTGTTCAGATGAGCTGAAGTTTCTGTCGTCCA ATCAGGCAGGTGATGCCACTAGTAGCGTTATTGAAGCTGCAGTGTCAAGCCCCTGGCAAA AGATTAAGTACACTGAAGCTGTCAATACTCTTCTTCAGGTCACGGATAAAACTTTTGAAT CGAAACTTGAGTTGGGCATGCCACTGTCTCGTGTGCATCTGAGTTATCTGGCTGATGATT TATACAAGAAGCCAGTAATCATATATGATTACCCGAAACAGCTAAAGCCATTTTATGCAC GCCTGAAGGAAGACCTGAAGACAGTCTCTGCCTTTGACTTAGTTGTGCCAAAGGTTGGCA TCGTAGCATGTGGAGCTCAGAAGGAGGAAAGGATGGATAATTTAACCTCAAGGATTGAGG AGTCAGGGCTGCAGGTTGAGCAGCTGGAATGGTATTTGGACACACGCAGACATGGCACTG TAAAGCACTCTGGTTTCAGCATAGACTTGGAGAGCCTCATCTTATTTGTCACCGGCCTCA AGGATGTCCGAGACGCCATCCCCTTCCATCGAACCAAAGGTCATGCAAAATGTTAGGCAG CAGATCGGTCATATGGAATCCAAGTTAGTAGAAGTTTGCCAGCTTCTGCTAATCGCTGTA AATATATCCGGCACGGTCATGTGGTATTCTACAAAGAAGAAAAATGATCTGTACTGAAAG TAAGAAATATATATAAACAAAATTGATC