Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0407500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12321685:12330180:-1 gene:Os12g0407500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 130 description:Tensin phosphatase, C2 domain domain containing protein. (Os12t0407500-01);Similar to PTEN-like protein. (Os12t0407500-02)
Sequence	ATGGAAGAACAGCAAGTAAAGCCCTCTGATTCACATCCACCACCTGCTACTCCGGTGGAC AGCCAGGATTCAACTGCACCTCCTGTCAGAACTCCTGACCCTGTTTCTCAGGCTACTTCA AATGATTCTGCCACCCAGTTTGCCAGTACAGTCCATGTAGCCCCTTCACCTGCACCTGTT CCAAATGCTGTTCCAATACAAGATGCTGCAGGACGCGAGGCACAATCCTCCATATTTTCA ACATCTGGCTTATCCTCCTGGGCAAAAAACCTGAAAATACCACAGCCTTCTTCAGGTCAA GAATCACCAACGGGGAAGAACACATTTTCTCGCCTCACGAGTGGCCTTGGGTTGCGCTTG TCTCCAAAAGGTCCTCAGCAAGATGAGAGTGCTGAAGGCAGCACAACCCCAACAACAGCA CAATCTGGCGTTTTTGGCTCTTTTACTAAAGGCATCGTGGATTCCTCTAAGAATGCTGTT AAGGCAGTGCAAGTCAAGGCTCGCCACATGGTCTCACAGAATAAAAGACGATATCAGGAA GGCGGCTTTGATTTAGATATGACATATATTACAGAGAACATCATTGCTATGGGTTTCCCT GCTGGAGATTTGAGCTCAGGGCTTTTTGGATATTTTGAGGGCTTCTACCGCAACCACATG GAGGAAGTCATCAGGTTCTTTGAAATGCACCACAAGGGAAAGTATAAGGTGTACAACCTT TGCTCGGAAAGGCTATATGATGCATCTCTTTTTGAGGGAAAGGTTGCATGCTTCCCTTTT GATGATCACAATTGCCCTCCGATACAACTTGTCATATCGTTCTGCCATAGTGCTTACTCT TGGTTGAAGGAAGATATAGAAAATGTAGTGGTTGTTCATTGCAAAGCTGGAAAGGCGAGG ACAGGATTGATGATCTCCAGTCTGCTACTATACCTGAAGTTCTTTCCAACTGCGGAAGAG TCCATTGAATACTACAATCAGAAAAGATGTGTAGATGGAAAAGGGCTTATTCTCCCAAGT CAGATTAGATATGTGAAATATTTTGAGCGCATCTTAACTTACTTCAATGGTGAAAATCAG CCTCCACGCAGGTGCATGCTCAGGGGATTTCGCCTTCATAGATGCCCTTATTGGATTAGA CCATCAATCACTGTGTCTAATCACAATGGTGTTCTTTTCACAACTAAGAAGCACCCTAGA ACAAAGGAGCTGATGCCAGAAGATTTCTGGTTTAGTGCACCAAAGAAAGGGATCATGGTT TTTGCGTTGCCTGGAGAGCCTGGATTAACAGAGGTAGCTGGTGACTTCAAGATTCAGTTT CATGATCGACAGGGGGATTTCTACTGCTGGTTAAATACAACAATGATGGAGAACAGGGTG ACTTTGAATCCAACTGATCTTGATGATTTTGACAAGAGGAAATTACCATCACCTGGATTC CAGGTTGAGGTTGTCCTGGTAGACTATGATGGTTCACAACCACCAAAACCAAAACCAGCT GCCGCATCTACTGATCAGAAGTCTGAAGCTGATTCCTCGACTGGAACTGTTGCAAAAGGA AATAATGCTTCATCTGCAGAAGTGTCCAACAAGGAATCTGCAAGGAATGATAAGGATGAC GTCTTCTCTGACAGTGAAGCAGAAGATGGATCATCCAAGGGCAGAAGGGAGAAGGTCTCT AGGAACGTTGAGGGTACTACTAATGCTGCAAAAGCGTCTGAAACAAGCTCTGTGCAAAAG GAGGCGTCTGCTGCTGCTTCCAGAATTGAAAAAGTATCAATAACCAGCGAACAAGGAAGT GCAAGGACACCTGATGCTGCACCTCTCAAAAGTGGAGTTAGCAGCAAGAGCAGCTCCACC ACAGCACCACCACCACCCCCAGCGGCTGCTGACTCCAGCATGAGCGAGTTCAAGGCAATT GCTGCAGACGCTTCGGTCTTCTCGTTCGGAGATGAAGACGACTATGAAAGCGAATAA

Peptide Sequence

PEP ID	Os12t0407500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12321685:12330180:-1 gene:Os12g0407500 transcript:Os12t0407500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 130 description:Tensin phosphatase, C2 domain domain containing protein. (Os12t0407500-01);Similar to PTEN-like protein. (Os12t0407500-02)
Sequence	MEEQQVKPSDSHPPPATPVDSQDSTAPPVRTPDPVSQATSNDSATQFASTVHVAPSPAPV PNAVPIQDAAGREAQSSIFSTSGLSSWAKNLKIPQPSSGQESPTGKNTFSRLTSGLGLRL SPKGPQQDESAEGSTTPTTAQSGVFGSFTKGIVDSSKNAVKAVQVKARHMVSQNKRRYQE GGFDLDMTYITENIIAMGFPAGDLSSGLFGYFEGFYRNHMEEVIRFFEMHHKGKYKVYNL CSERLYDASLFEGKVACFPFDDHNCPPIQLVISFCHSAYSWLKEDIENVVVVHCKAGKAR TGLMISSLLLYLKFFPTAEESIEYYNQKRCVDGKGLILPSQIRYVKYFERILTYFNGENQ PPRRCMLRGFRLHRCPYWIRPSITVSNHNGVLFTTKKHPRTKELMPEDFWFSAPKKGIMV FALPGEPGLTEVAGDFKIQFHDRQGDFYCWLNTTMMENRVTLNPTDLDDFDKRKLPSPGF QVEVVLVDYDGSQPPKPKPAAASTDQKSEADSSTGTVAKGNNASSAEVSNKESARNDKDD VFSDSEAEDGSSKGRREKVSRNVEGTTNAAKASETSSVQKEASAAASRIEKVSITSEQGS ARTPDAAPLKSGVSSKSSSTTAPPPPPAAADSSMSEFKAIAADASVFSFGDEDDYESE

Transcript Sequence

Transcript ID	Os12t0407500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12321685:12330180:-1 gene:Os12g0407500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 130 description:Tensin phosphatase, C2 domain domain containing protein. (Os12t0407500-01);Similar to PTEN-like protein. (Os12t0407500-02)
Sequence	AGGCCCCAACCCCAACACCCCCAACCCGCCCGAAAGAAAATCTCCCGTATCGTCTCCTCC GCTCCTTGCGCCATCTCGCGGCAGATCAGGGGAGGAGGCGCCGATCTCCATCTGGCGAGC AGAGCGGGGAGGGGGCGCCGTCGTCCTGCTGCATCCTGATGTTACTCGCGCTTCAAAACT CTGAGGTTTGTTAAATCTGTTGGCTAATCATGGAAGAACAGCAAGTAAAGCCCTCTGATT CACATCCACCACCTGCTACTCCGGTGGACAGCCAGGATTCAACTGCACCTCCTGTCAGAA CTCCTGACCCTGTTTCTCAGGCTACTTCAAATGATTCTGCCACCCAGTTTGCCAGTACAG TCCATGTAGCCCCTTCACCTGCACCTGTTCCAAATGCTGTTCCAATACAAGATGCTGCAG GACGCGAGGCACAATCCTCCATATTTTCAACATCTGGCTTATCCTCCTGGGCAAAAAACC TGAAAATACCACAGCCTTCTTCAGGTCAAGAATCACCAACGGGGAAGAACACATTTTCTC GCCTCACGAGTGGCCTTGGGTTGCGCTTGTCTCCAAAAGGTCCTCAGCAAGATGAGAGTG CTGAAGGCAGCACAACCCCAACAACAGCACAATCTGGCGTTTTTGGCTCTTTTACTAAAG GCATCGTGGATTCCTCTAAGAATGCTGTTAAGGCAGTGCAAGTCAAGGCTCGCCACATGG TCTCACAGAATAAAAGACGATATCAGGAAGGCGGCTTTGATTTAGATATGACATATATTA CAGAGAACATCATTGCTATGGGTTTCCCTGCTGGAGATTTGAGCTCAGGGCTTTTTGGAT ATTTTGAGGGCTTCTACCGCAACCACATGGAGGAAGTCATCAGGTTCTTTGAAATGCACC ACAAGGGAAAGTATAAGGTGTACAACCTTTGCTCGGAAAGGCTATATGATGCATCTCTTT TTGAGGGAAAGGTTGCATGCTTCCCTTTTGATGATCACAATTGCCCTCCGATACAACTTG TCATATCGTTCTGCCATAGTGCTTACTCTTGGTTGAAGGAAGATATAGAAAATGTAGTGG TTGTTCATTGCAAAGCTGGAAAGGCGAGGACAGGATTGATGATCTCCAGTCTGCTACTAT ACCTGAAGTTCTTTCCAACTGCGGAAGAGTCCATTGAATACTACAATCAGAAAAGATGTG TAGATGGAAAAGGGCTTATTCTCCCAAGTCAGATTAGATATGTGAAATATTTTGAGCGCA TCTTAACTTACTTCAATGGTGAAAATCAGCCTCCACGCAGGTGCATGCTCAGGGGATTTC GCCTTCATAGATGCCCTTATTGGATTAGACCATCAATCACTGTGTCTAATCACAATGGTG TTCTTTTCACAACTAAGAAGCACCCTAGAACAAAGGAGCTGATGCCAGAAGATTTCTGGT TTAGTGCACCAAAGAAAGGGATCATGGTTTTTGCGTTGCCTGGAGAGCCTGGATTAACAG AGGTAGCTGGTGACTTCAAGATTCAGTTTCATGATCGACAGGGGGATTTCTACTGCTGGT TAAATACAACAATGATGGAGAACAGGGTGACTTTGAATCCAACTGATCTTGATGATTTTG ACAAGAGGAAATTACCATCACCTGGATTCCAGGTTGAGGTTGTCCTGGTAGACTATGATG GTTCACAACCACCAAAACCAAAACCAGCTGCCGCATCTACTGATCAGAAGTCTGAAGCTG ATTCCTCGACTGGAACTGTTGCAAAAGGAAATAATGCTTCATCTGCAGAAGTGTCCAACA AGGAATCTGCAAGGAATGATAAGGATGACGTCTTCTCTGACAGTGAAGCAGAAGATGGAT CATCCAAGGGCAGAAGGGAGAAGGTCTCTAGGAACGTTGAGGGTACTACTAATGCTGCAA AAGCGTCTGAAACAAGCTCTGTGCAAAAGGAGGCGTCTGCTGCTGCTTCCAGAATTGAAA AAGTATCAATAACCAGCGAACAAGGAAGTGCAAGGACACCTGATGCTGCACCTCTCAAAA GTGGAGTTAGCAGCAAGAGCAGCTCCACCACAGCACCACCACCACCCCCAGCGGCTGCTG ACTCCAGCATGAGCGAGTTCAAGGCAATTGCTGCAGACGCTTCGGTCTTCTCGTTCGGAG ATGAAGACGACTATGAAAGCGAATAATTCACACCCTTTTGTGGGCGCCTGGTTCGCCATT GTATAGTTTGGTGCTTTCCAGATCATGATAGGATACCACCTGGAAGCAACAGGTAGAAAA GATGAAAAGAATTGCTTTGTTCTACCGTTTTATGTTTCATTGTAGCCCTTTTTCAAGCTG TAATGTTGTACAATGGTGAACTTTGTAACTCCAAAAATGTCAGAACTTTGTTGATACTTC GCTTATTTGTTTACAGAGATTCTATACATGGATTCTT