Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0407300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12315850:12318391:-1 gene:Os12g0407300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to intron maturase, type II family protein. (Os12t0407300-01)
Sequence	ATGACGGCACGCGGGGCGCTCCGCCGCCTCATCCCTAGCCACCTCCAACCCGTCAGCCGC CGCGCCCCGCCGCCGCCGCCATCGGCGGCCGACGAGGGGCCCTTCCCGGACCCCTACGCT CTCCTTGTCCACGACCCCATCGATCTCCTTTCCTCTCTGTGGCGCCGCGCCTTCGCTCAC CCGCTCCCGGCGCCCTTCCCCAACCTCTCCGGGTACGCCTCCCGCCTCGATCTCTGGCTC CTCTCTTACCAGCGAGCCTGCGCCCACGCCACGGGCTCCTTCCCGCCACGCCACGCCGTC CAGCTCCCCACCCTCCACTCCCTCCTCCGCCTCCGCGCCGCCGCCCTCCGCCGCCACCCC GCCTTCCCCTGGGGCGCCTCCACGCACCTCCTCATCCGCTCCCCGGCCGACCCCCCTTCC ACCGTCACCATCTCCCGCCGCAAGCTCGAAGCCCGCCTCGCCAACGCGCCGCCCCCGTTC CAGGACCGCGTCGTCCAGGAGCTCCTCCTCCTGCTCCTCGAGCCCGTCTTCGAGCCCCGT TTCTCTCCGAAGTCCCACGCCTTCCGCCCCGGCCGCGGGCCCCACACCGCCATCCGCTCC GTCCGCTCCCACTTCGCCGCCTACCTCTGGTTCATCTCCGCGGACCTCACCGGGGTGGTC GACGCACTCTCGCCTTATACCATACTCTCCTGCGTCCAGAAGGCCGTCTCTGACCGCAAG GTCTTATCTTTGCTGAAGTCGGCGCTCAATGCCCCTGTCCGGCCTGGGTCTGTGCCACCA CGGGAGAAGGAGCTTGATGGCCTAGCTAAGAAGAGGCTGAAGAGGAAGGTTCTCAGGAAA AGCAGGAAGAAGAAGGTGCTCAATGAGAACGAGCCCAAGCCTGATCCGTATTGGTTGAGG TTATTCTTCGGGTTTGCCCCAGAACAGGCGTGCCATGCACCGAATTATGGGCATTGTGGG ATACTTAGCCCTTTGCTTGCCAATGTGTGCCTTAACGAACTGGATTGGTGGCTCGAGGAG AGAATTCATGAGTACTTCCGCCCGTCAAGCCATGATTCGATTTGGAAGGAGGCGGGTGAT GAAGGATGCCATAATCCTGCCTGGCCTGAGTTTGTCCCATCAAGTGGGAAGGAGAAGACA AGGAAGATGGATTACCTTAGATTTGGCTCCCATGTTCTTATTGGGATCAGGGGACCAAGG GAGGACGCAGTTGAGATAAGGAGACAACTGATGGAGTTCTGCGAGAGCACGTTTGGTTTG AGGCCTGAGAATTCGATGGTAGAGATTGAGCACATCACAAGAGGGATTGAGTTCTTGGAT CATGTGATCACCCGCCGGGTCATCTACCCAACCTTAAGATATACCGCTAGTGGAGGGAAC ATTGTGAGTGAGAAAGGTATTGGGACATTATTATCAGTAACAGCAAGCCTTCAGAGGTGC ATAAGGCATTTCAGGAAGCTTGAACTTGTAAAGGGGGATCGGGATCCTGAGCCATTGCCA TGTTCACCAATGCTGTACTCTGGGCAGGCGCACACTAACTCTCAGATGAACAAATTTCTT GAGACCATGGCTGATTGGTACAGATATGCAGACAACCGGAAGAAGATTGTAGGGTTCTGT GCATATGTCATTAGGAGTTCCTTGGCAAAGCTTTATGCGGCAAGGTATAGACTCAAGTCT CGAGCTAAAGTTTACAAGATTGCCTCACGTGACCTTAGCCGCCCATTGAGAGAGAGCACA AGGAATGATGCACCAGAATACTCTGATCTCTTGAGAATGGGACTAGTTGATATTATTGAG GGTGTACAATTTGCACGCATGTCATCAATTCCATCGTGTGACTACACACCTTTCCCTAGA AACTGGGTGCCTCACCACGAGCTTGTATTGCGTGAGTATATTAAACTGCAAGATCCAAAA TTCTTCTGTGAACTTCATAAGACAATCAAAAGGAAGGAGATAAATTCACCGCAGGATGAT GTATCAAGGATGGTGTGGTATTATAAAGTTTATGGTGTTTATGATGCTAAAAGGTCCCTA CAAAAACTAAATGATTGGAAGAATACTGATGAAGCTGCCAATAAGGAGAATCAGATTCTG TTGGGCAGTGTATCAATGGTACATTAG

Peptide Sequence

PEP ID	Os12t0407300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12315850:12318391:-1 gene:Os12g0407300 transcript:Os12t0407300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to intron maturase, type II family protein. (Os12t0407300-01)
Sequence	MTARGALRRLIPSHLQPVSRRAPPPPPSAADEGPFPDPYALLVHDPIDLLSSLWRRAFAH PLPAPFPNLSGYASRLDLWLLSYQRACAHATGSFPPRHAVQLPTLHSLLRLRAAALRRHP AFPWGASTHLLIRSPADPPSTVTISRRKLEARLANAPPPFQDRVVQELLLLLLEPVFEPR FSPKSHAFRPGRGPHTAIRSVRSHFAAYLWFISADLTGVVDALSPYTILSCVQKAVSDRK VLSLLKSALNAPVRPGSVPPREKELDGLAKKRLKRKVLRKSRKKKVLNENEPKPDPYWLR LFFGFAPEQACHAPNYGHCGILSPLLANVCLNELDWWLEERIHEYFRPSSHDSIWKEAGD EGCHNPAWPEFVPSSGKEKTRKMDYLRFGSHVLIGIRGPREDAVEIRRQLMEFCESTFGL RPENSMVEIEHITRGIEFLDHVITRRVIYPTLRYTASGGNIVSEKGIGTLLSVTASLQRC IRHFRKLELVKGDRDPEPLPCSPMLYSGQAHTNSQMNKFLETMADWYRYADNRKKIVGFC AYVIRSSLAKLYAARYRLKSRAKVYKIASRDLSRPLRESTRNDAPEYSDLLRMGLVDIIE GVQFARMSSIPSCDYTPFPRNWVPHHELVLREYIKLQDPKFFCELHKTIKRKEINSPQDD VSRMVWYYKVYGVYDAKRSLQKLNDWKNTDEAANKENQILLGSVSMVH

Transcript Sequence

Transcript ID	Os12t0407300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12315850:12318391:-1 gene:Os12g0407300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to intron maturase, type II family protein. (Os12t0407300-01)
Sequence	GCTAAGCGCCCACCACCTGTTCGACGGAAACCCCAGCCGCGAGCCCGCGATGACGGCACG CGGGGCGCTCCGCCGCCTCATCCCTAGCCACCTCCAACCCGTCAGCCGCCGCGCCCCGCC GCCGCCGCCATCGGCGGCCGACGAGGGGCCCTTCCCGGACCCCTACGCTCTCCTTGTCCA CGACCCCATCGATCTCCTTTCCTCTCTGTGGCGCCGCGCCTTCGCTCACCCGCTCCCGGC GCCCTTCCCCAACCTCTCCGGGTACGCCTCCCGCCTCGATCTCTGGCTCCTCTCTTACCA GCGAGCCTGCGCCCACGCCACGGGCTCCTTCCCGCCACGCCACGCCGTCCAGCTCCCCAC CCTCCACTCCCTCCTCCGCCTCCGCGCCGCCGCCCTCCGCCGCCACCCCGCCTTCCCCTG GGGCGCCTCCACGCACCTCCTCATCCGCTCCCCGGCCGACCCCCCTTCCACCGTCACCAT CTCCCGCCGCAAGCTCGAAGCCCGCCTCGCCAACGCGCCGCCCCCGTTCCAGGACCGCGT CGTCCAGGAGCTCCTCCTCCTGCTCCTCGAGCCCGTCTTCGAGCCCCGTTTCTCTCCGAA GTCCCACGCCTTCCGCCCCGGCCGCGGGCCCCACACCGCCATCCGCTCCGTCCGCTCCCA CTTCGCCGCCTACCTCTGGTTCATCTCCGCGGACCTCACCGGGGTGGTCGACGCACTCTC GCCTTATACCATACTCTCCTGCGTCCAGAAGGCCGTCTCTGACCGCAAGGTCTTATCTTT GCTGAAGTCGGCGCTCAATGCCCCTGTCCGGCCTGGGTCTGTGCCACCACGGGAGAAGGA GCTTGATGGCCTAGCTAAGAAGAGGCTGAAGAGGAAGGTTCTCAGGAAAAGCAGGAAGAA GAAGGTGCTCAATGAGAACGAGCCCAAGCCTGATCCGTATTGGTTGAGGTTATTCTTCGG GTTTGCCCCAGAACAGGCGTGCCATGCACCGAATTATGGGCATTGTGGGATACTTAGCCC TTTGCTTGCCAATGTGTGCCTTAACGAACTGGATTGGTGGCTCGAGGAGAGAATTCATGA GTACTTCCGCCCGTCAAGCCATGATTCGATTTGGAAGGAGGCGGGTGATGAAGGATGCCA TAATCCTGCCTGGCCTGAGTTTGTCCCATCAAGTGGGAAGGAGAAGACAAGGAAGATGGA TTACCTTAGATTTGGCTCCCATGTTCTTATTGGGATCAGGGGACCAAGGGAGGACGCAGT TGAGATAAGGAGACAACTGATGGAGTTCTGCGAGAGCACGTTTGGTTTGAGGCCTGAGAA TTCGATGGTAGAGATTGAGCACATCACAAGAGGGATTGAGTTCTTGGATCATGTGATCAC CCGCCGGGTCATCTACCCAACCTTAAGATATACCGCTAGTGGAGGGAACATTGTGAGTGA GAAAGGTATTGGGACATTATTATCAGTAACAGCAAGCCTTCAGAGGTGCATAAGGCATTT CAGGAAGCTTGAACTTGTAAAGGGGGATCGGGATCCTGAGCCATTGCCATGTTCACCAAT GCTGTACTCTGGGCAGGCGCACACTAACTCTCAGATGAACAAATTTCTTGAGACCATGGC TGATTGGTACAGATATGCAGACAACCGGAAGAAGATTGTAGGGTTCTGTGCATATGTCAT TAGGAGTTCCTTGGCAAAGCTTTATGCGGCAAGGTATAGACTCAAGTCTCGAGCTAAAGT TTACAAGATTGCCTCACGTGACCTTAGCCGCCCATTGAGAGAGAGCACAAGGAATGATGC ACCAGAATACTCTGATCTCTTGAGAATGGGACTAGTTGATATTATTGAGGGTGTACAATT TGCACGCATGTCATCAATTCCATCGTGTGACTACACACCTTTCCCTAGAAACTGGGTGCC TCACCACGAGCTTGTATTGCGTGAGTATATTAAACTGCAAGATCCAAAATTCTTCTGTGA ACTTCATAAGACAATCAAAAGGAAGGAGATAAATTCACCGCAGGATGATGTATCAAGGAT GGTGTGGTATTATAAAGTTTATGGTGTTTATGATGCTAAAAGGTCCCTACAAAAACTAAA TGATTGGAAGAATACTGATGAAGCTGCCAATAAGGAGAATCAGATTCTGTTGGGCAGTGT ATCAATGGTACATTAGGCTTATGTTTTGTGAAGAAAGTTTTATTGGATAAACCGTCTTAG ACAGCCTTTTTTTCAATAGAGAATACTCATGGATGGTATATCAACAACACATAGCTAAAG ATATCTATCGTCTAGGAGATATTCTATTGTGCAAGGGTATACTTTTAATTGTATACAATG AATAATGACCATATCTCACTGTAAATTCATCCTTTTCAATTTTGTTTTACTCTTAGAAGC ATGACACACTAATTTGCTTTTTTTTTTTGTTTTAGTTGACAAATCAGGTGTTGCACGTTA GTAAATAGCGTAGAAACTGAAGTGTGCACTCATATTCTCTGTAACCAGGAGTTATTGCAA TTAGGCACAAATTAATCTTTTT