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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0407000-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:12303450:12304062:-1 gene:Os12g0407000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 73 description:Similar to SRF-type transcription factor family protein, expressed. (Os12t0407000-00)
Sequence

ATGGTGCATCCGCTGGGGAGGACGAGTATGGGGCGGCAGCGCATCGAGATCCGCCGCATC
GACAACAAGGAAAGGCGGCAGGTCACCTTCACCAAGCGGAGGGGCGGGCTGTTCAAGAAG
GCGTCGGAGCTCGCCCTGCTCACCGGCGCGAGCGTCGCCGTCGTTGTCTTCTCCCCTGCC
AAGCACGTCTACGCCTTCGGCCACCCGTCCGTCGACGCCGTTCTCCGCTCATACGCCTCC
GTCCCCGGGGAGGCCGCCGCGGTCGCACCCGTCCCCGTCCACGGCGGCAGCGGCGGCGAG
GACGTCGACCTCCTCGGGCTGAGGCTGGCGGCAGATGATACCGGGGCGCAGGTCGCGGCG
GAGCATGCGCGGATGCGCGACGTCGCGGCGAGGATCGTGCAGGCGAAGGCCGGGAGGCGG
TTCTGGTGGGAGGCCGACGTGGACGCGCTCGGGGAGGCCGAGTTGCTGGAGTTCTTCACG
GCGCTCAAGAAGCTCAGGGACAACGTCGGCCGCCACGCCAACGCCCTGCTCGCCCCCCAG
CCGCCGCCGCTTCCGCTGCAGCAGAAGCAGCGGCGCCGGCGGTAG

Peptide Sequence

PEP ID

Os12t0407000-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:12303450:12304062:-1 gene:Os12g0407000 transcript:Os12t0407000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 73 description:Similar to SRF-type transcription factor family protein, expressed. (Os12t0407000-00)
Sequence

MVHPLGRTSMGRQRIEIRRIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPA
KHVYAFGHPSVDAVLRSYASVPGEAAAVAPVPVHGGSGGEDVDLLGLRLAADDTGAQVAA
EHARMRDVAARIVQAKAGRRFWWEADVDALGEAELLEFFTALKKLRDNVGRHANALLAPQ
PPPLPLQQKQRRRR

Transcript Sequence

Transcript ID

Os12t0407000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:12303450:12304062:-1 gene:Os12g0407000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 73 description:Similar to SRF-type transcription factor family protein, expressed. (Os12t0407000-00)
Sequence

ATGGTGCATCCGCTGGGGAGGACGAGTATGGGGCGGCAGCGCATCGAGATCCGCCGCATC
GACAACAAGGAAAGGCGGCAGGTCACCTTCACCAAGCGGAGGGGCGGGCTGTTCAAGAAG
GCGTCGGAGCTCGCCCTGCTCACCGGCGCGAGCGTCGCCGTCGTTGTCTTCTCCCCTGCC
AAGCACGTCTACGCCTTCGGCCACCCGTCCGTCGACGCCGTTCTCCGCTCATACGCCTCC
GTCCCCGGGGAGGCCGCCGCGGTCGCACCCGTCCCCGTCCACGGCGGCAGCGGCGGCGAG
GACGTCGACCTCCTCGGGCTGAGGCTGGCGGCAGATGATACCGGGGCGCAGGTCGCGGCG
GAGCATGCGCGGATGCGCGACGTCGCGGCGAGGATCGTGCAGGCGAAGGCCGGGAGGCGG
TTCTGGTGGGAGGCCGACGTGGACGCGCTCGGGGAGGCCGAGTTGCTGGAGTTCTTCACG
GCGCTCAAGAAGCTCAGGGACAACGTCGGCCGCCACGCCAACGCCCTGCTCGCCCCCCAG
CCGCCGCCGCTTCCGCTGCAGCAGAAGCAGCGGCGCCGGCGGTAGGAGGGCCGCTCGCCG
CCTCGCGGCGTCG