Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0406200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12270569:12274367:-1 gene:Os12g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S3a (CYC07 protein). (Os12t0406200-01)
Sequence	ATGGCCGTCGGCAAGAACAAGCGGATCTCGAAGGGGAAGAAGGGATCCAAGAAGAAGACC GTCGATCCTTTTGCGAAGAAGGATTGGTATGATATCAAGGCCCCGTCGGTGTTCAACGTG AGAAACGTCGGGAAGACGCTCGTGTCCAGGACACAGGGCACAAAGATTGCTTCAGAGGGC CTCAAGCACCGTGTGTTTGAGGTCTCCTTGGCTGATCTTCAGAACGATGAGGATCAGGCG TACCGTAAGATCAGACTACGTGCCGAGGATGTGCAGGGGAAAAATGTTCTTACAAACTTC TGGGGCATGAGTTTCACGACCGACAAGCTCAGATCATTGGTCAAGAAATGGCAGACGCTA ATAGAGGCTCATGTGGATGTAAAGACCACTGATAACTACATGCTGCGTCTCTTCTGCATT GGCTTCACCAAGAGGAGGCCAAATCAAGTCAAACGGACATGCTATGCTCAAGCAAGCCAG ATTCGACAGATCCGTCGCAAGATGGTGGAGATCATGGTGAACCAGGCATCATCCTGTGAT CTCAAGGAGCTGGTGTCAAAATTCATTCCTGAGGTGATTGGGAAGGAAATCGAGAAGGCC ACATCAAGCATCTTCCCGCTTCAGAATGTGTTTGTGCGCAAAGTCAAGATCCTCAAGGCC CCAAAATTTGACCTGGGCAAGCTTATGGAGGTTCATGGAGATTACAAGGAGGACGTTGGG ACGAAGCTCGAGAGGCCTGCAGAAGATGAGGTCGTGGTAGGACAGGAGGTCACTGCCGAG TAG

Peptide Sequence

PEP ID	Os12t0406200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12270569:12274367:-1 gene:Os12g0406200 transcript:Os12t0406200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S3a (CYC07 protein). (Os12t0406200-01)
Sequence	MAVGKNKRISKGKKGSKKKTVDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEG LKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTL IEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQASSCD LKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYKEDVG TKLERPAEDEVVVGQEVTAE

Transcript Sequence

Transcript ID	Os12t0406200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12270569:12274367:-1 gene:Os12g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S3a (CYC07 protein). (Os12t0406200-01)
Sequence	ACCCGCGCCGCGCCCCACCCAAGACGAGAGCGAGCGAGGCAGTGCCGCCGCCGCCGCCAC TGACGCCGCCCGAGCACCACCGGAGCAGGAGCAGCGTCAGCCATGGCCGTCGGCAAGAAC AAGCGGATCTCGAAGGGGAAGAAGGGATCCAAGAAGAAGACCGTCGATCCTTTTGCGAAG AAGGATTGGTATGATATCAAGGCCCCGTCGGTGTTCAACGTGAGAAACGTCGGGAAGACG CTCGTGTCCAGGACACAGGGCACAAAGATTGCTTCAGAGGGCCTCAAGCACCGTGTGTTT GAGGTCTCCTTGGCTGATCTTCAGAACGATGAGGATCAGGCGTACCGTAAGATCAGACTA CGTGCCGAGGATGTGCAGGGGAAAAATGTTCTTACAAACTTCTGGGGCATGAGTTTCACG ACCGACAAGCTCAGATCATTGGTCAAGAAATGGCAGACGCTAATAGAGGCTCATGTGGAT GTAAAGACCACTGATAACTACATGCTGCGTCTCTTCTGCATTGGCTTCACCAAGAGGAGG CCAAATCAAGTCAAACGGACATGCTATGCTCAAGCAAGCCAGATTCGACAGATCCGTCGC AAGATGGTGGAGATCATGGTGAACCAGGCATCATCCTGTGATCTCAAGGAGCTGGTGTCA AAATTCATTCCTGAGGTGATTGGGAAGGAAATCGAGAAGGCCACATCAAGCATCTTCCCG CTTCAGAATGTGTTTGTGCGCAAAGTCAAGATCCTCAAGGCCCCAAAATTTGACCTGGGC AAGCTTATGGAGGTTCATGGAGATTACAAGGAGGACGTTGGGACGAAGCTCGAGAGGCCT GCAGAAGATGAGGTCGTGGTAGGACAGGAGGTCACTGCCGAGTAGATTTTCACTTATTTT ACTGCTATTTTATTCAGACAATATATATATGTATCGCCTATCAAGGTTTTGATCACGAGC AGCAGGCTCGGTTTTTGTGGCTAATTTCCTGAATACTTTCTTGAGATTACTAGCCAGCAT CGTTTTTGTTTTCTGGATGGAAGTTTATTTGTCTAAAGTTTGTGCTTTCTTTTTTTTGCA ACCTGACAAGTCAAGACTGATAAAGAAGAAAGTTCTTT