Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0406100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12264732:12267518:-1 gene:Os12g0406100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os12t0406100-01)
Sequence	ATGGGTTTGAGGAGCAAGCAGCCAAAAGCATTAGCTTTCCGCTGCTATGCGGCGAGCCAC CGATCTCTAACTCTTGCAGTGTGGAGCCTTGCAGCACTGGTAGTAGTTGTGAATTTCCAT CTTCTTATCATACATAAGGAGGATGAGAGCACCAGCATACATGAGATCAATCGGTCAATT GTAAGCGAGCTGGAGGAGGTTGAGGAGGAAAAGTTCCGGGTATCGCCTCCCCGGAGCCGG AGGAATCCCCGGGCTGTGCGGCGCAAGGGGGAGCAGAAGCCACCTTCTGTAGTGGATGAG TTCTTGGATGAGTCTTCTGCGGTGCACGACATGTTCTTTCCAGAACGCAACATGGCTATA GATCCAATCAATGGTGGGAATGACAGCATGTACTTCTACTACCCAGGGAGAGTTTGGCTT GACACTGATGGTAATCCAATCCAAGCTCATGGAGGAGGTGTACTGTACGATGAGAAAACC GAGACCTATTTCTGGTATGGGGAGAATAAGGATGGCAAAACATACAAAGCTCACAGCAAG GGAGCTGATCGGGTTGACATTGTGGGAGTAAGTTGCTATTCATCAAAGGACCTGTGGACG TGGAGAAATGAAGGAGTTGTTCTCCGAGGTGAGAAAAAGAATGTGACACATGATCTCCAT AAATCCAATGTCCTGGAGAGACCCAAAGTTATATATAATGATCGGACTGGCAAATATGTT ATGTGGATGCACATAGACGATACAAATTACACCAAAGCATCAGTTGGTGTGGCCATCAGT GACTCTCCCACAGGCCCATTCAGTTACCTGTACAGCAAGCAGCCACATGACTGTGAAAGT AGAGACATGACCATCTTCAAGGATGACAATGGGAAGGCCTACCTGATATATTCTTCTGAG GACAACAGCGAGCTCCACATTGGTCAGTTAACTGATGACTACCTTGATGTAACTGATAAT ATGCGAAGGCTTCTCATTGCACAACATCGAGAAGCTCCTGCGCTTTTCAAGTATGAGGGC ACCTACTACATGATAACCTCTGGTTGCACTGGCTGGGCACCAAACACTGCACTAGCTCAT GCGGCGACAGCAATAATGGGACCTTGGGAGACGCTGGGAAATCCTTGTGTGGGAGGGAAT GACATATTCAGATCAACAACATTCTTCTCCCAGAGTACATTTGTGTTGCCGATTCCAGGA CTGTCAGGTTCATTCATCTTCATGGCTGATCGGTGGAGCCCATCCGAGCTGAGAGATTCG CGATATGTATGGCTGCCTTTGACAGTAGGTGGACTACCTGATGAGGCTGCAGATTACAGC TTCATGTTCCCTCTTTGGTCCCGGGTGTCGATTTACTGGCACAGACGGTGGCGGCTCCCT GAGGGGTGGAGGGACTCCTGA

Peptide Sequence

PEP ID	Os12t0406100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12264732:12267518:-1 gene:Os12g0406100 transcript:Os12t0406100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os12t0406100-01)
Sequence	MGLRSKQPKALAFRCYAASHRSLTLAVWSLAALVVVVNFHLLIIHKEDESTSIHEINRSI VSELEEVEEEKFRVSPPRSRRNPRAVRRKGEQKPPSVVDEFLDESSAVHDMFFPERNMAI DPINGGNDSMYFYYPGRVWLDTDGNPIQAHGGGVLYDEKTETYFWYGENKDGKTYKAHSK GADRVDIVGVSCYSSKDLWTWRNEGVVLRGEKKNVTHDLHKSNVLERPKVIYNDRTGKYV MWMHIDDTNYTKASVGVAISDSPTGPFSYLYSKQPHDCESRDMTIFKDDNGKAYLIYSSE DNSELHIGQLTDDYLDVTDNMRRLLIAQHREAPALFKYEGTYYMITSGCTGWAPNTALAH AATAIMGPWETLGNPCVGGNDIFRSTTFFSQSTFVLPIPGLSGSFIFMADRWSPSELRDS RYVWLPLTVGGLPDEAADYSFMFPLWSRVSIYWHRRWRLPEGWRDS

Transcript Sequence

Transcript ID	Os12t0406100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12264732:12267518:-1 gene:Os12g0406100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 43 protein. (Os12t0406100-01)
Sequence	GGCGCATCACTAATTTTGGGAATGAAATCTGGGGACAGTGAATACCGGACTAATGTGGAG AATTTCCCTTCTTAATTGCCCCAACTGTTTGTTTCCTGATTTGATATAGAGATAAGTTTG TGCATTGATTCATTCTTTGTGCCCTTGAACTGTTCCTTCAATTTATTGCAGCGATTATCA GTTGGAGCAGAAAGGTGCCAGCATGGGTTTGAGGAGCAAGCAGCCAAAAGCATTAGCTTT CCGCTGCTATGCGGCGAGCCACCGATCTCTAACTCTTGCAGTGTGGAGCCTTGCAGCACT GGTAGTAGTTGTGAATTTCCATCTTCTTATCATACATAAGGAGGATGAGAGCACCAGCAT ACATGAGATCAATCGGTCAATTGTAAGCGAGCTGGAGGAGGTTGAGGAGGAAAAGTTCCG GGTATCGCCTCCCCGGAGCCGGAGGAATCCCCGGGCTGTGCGGCGCAAGGGGGAGCAGAA GCCACCTTCTGTAGTGGATGAGTTCTTGGATGAGTCTTCTGCGGTGCACGACATGTTCTT TCCAGAACGCAACATGGCTATAGATCCAATCAATGGTGGGAATGACAGCATGTACTTCTA CTACCCAGGGAGAGTTTGGCTTGACACTGATGGTAATCCAATCCAAGCTCATGGAGGAGG TGTACTGTACGATGAGAAAACCGAGACCTATTTCTGGTATGGGGAGAATAAGGATGGCAA AACATACAAAGCTCACAGCAAGGGAGCTGATCGGGTTGACATTGTGGGAGTAAGTTGCTA TTCATCAAAGGACCTGTGGACGTGGAGAAATGAAGGAGTTGTTCTCCGAGGTGAGAAAAA GAATGTGACACATGATCTCCATAAATCCAATGTCCTGGAGAGACCCAAAGTTATATATAA TGATCGGACTGGCAAATATGTTATGTGGATGCACATAGACGATACAAATTACACCAAAGC ATCAGTTGGTGTGGCCATCAGTGACTCTCCCACAGGCCCATTCAGTTACCTGTACAGCAA GCAGCCACATGACTGTGAAAGTAGAGACATGACCATCTTCAAGGATGACAATGGGAAGGC CTACCTGATATATTCTTCTGAGGACAACAGCGAGCTCCACATTGGTCAGTTAACTGATGA CTACCTTGATGTAACTGATAATATGCGAAGGCTTCTCATTGCACAACATCGAGAAGCTCC TGCGCTTTTCAAGTATGAGGGCACCTACTACATGATAACCTCTGGTTGCACTGGCTGGGC ACCAAACACTGCACTAGCTCATGCGGCGACAGCAATAATGGGACCTTGGGAGACGCTGGG AAATCCTTGTGTGGGAGGGAATGACATATTCAGATCAACAACATTCTTCTCCCAGAGTAC ATTTGTGTTGCCGATTCCAGGACTGTCAGGTTCATTCATCTTCATGGCTGATCGGTGGAG CCCATCCGAGCTGAGAGATTCGCGATATGTATGGCTGCCTTTGACAGTAGGTGGACTACC TGATGAGGCTGCAGATTACAGCTTCATGTTCCCTCTTTGGTCCCGGGTGTCGATTTACTG GCACAGACGGTGGCGGCTCCCTGAGGGGTGGAGGGACTCCTGAAATTTACTTGACTGAAA TTGGTATACAATTTATACATGGTGGTCATACTAGAGATACCATACCAAATTATTGACACG ACACATTGGAGTGCACTGTATAGATCAGGTTTAGATCAGGTAGAGTTGTAAATGTGCAGT TTTTTTGGTCTGTTCTTAAATCACATATATGGTTGTGGGCTTGTGGCCTGTTGGGCGAGG TGTGGTGTTGATTATTTTTTCCTTTTACTGAGAATAATAATGTAGATGCAGAAATATCAA ATATGGGTTTGTCTTGTGGTC