Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0405100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:12195260:12202939:1 gene:Os12g0405100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 description:Similar to Floral homeotic protein HUA1. (Os12t0405100-01)
Sequence	ATGGCGGCGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGC ACCTCCCCGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTT GCCGCCGCGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCC ACTCCATACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTA TGTAGGTTTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCT GCTGCAAGGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTAC TTGAAAACTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAG GCTGCACTTGCAAACCGTGTACAGTTAAATGTTCTAGGCTACCCGATGCGTCCGAATGAG AAGGAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTT CATCATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGA CAGTCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTG TCAAGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAA GTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATG GGCTCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCA CGTCAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGC TCTGTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGAT CAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAG TTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGT CTTCCACTACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAG TTTGGTCCTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACA TCACCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCA GGAATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAG CAAATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAA

Peptide Sequence

PEP ID	Os12t0405100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:12195260:12202939:1 gene:Os12g0405100 transcript:Os12t0405100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 description:Similar to Floral homeotic protein HUA1. (Os12t0405100-01)
Sequence	MAAGAGAGGGGGEGDSNGGGTSPGGVSAAAPAIGPHHLGVAAAEEAMWQMTLGGGESMES TPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGEYPYRVGQPECQYY LKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKF HHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQ VIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGG SVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLG LPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMHYQLSPSPGHP GILLDGGSGRSHRVPQSDSQQIPSGDGNAEREAS

Transcript Sequence

Transcript ID	Os12t0405100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:12195260:12202939:1 gene:Os12g0405100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 description:Similar to Floral homeotic protein HUA1. (Os12t0405100-01)
Sequence	GTCCGTTCGGCCCAGGGGATGGACGCTTGTCTCCTCCTCTCTCCTCCTCGCCGCCTCCTC TCCTCGCGTGCCTAGCTTCCCTTCCCTTCCCTTCCCTTCTTCCCTACTCCTCCCACTCCA CTCCACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATG GCGGCGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGCACC TCCCCGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTTGCC GCCGCGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCCACT CCATACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTATGT AGGTTTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCTGCT GCAAGGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTACTTG AAAACTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAGGCT GCACTTGCAAACCGTGTACAGTTAAATGTTCTAGGCTACCCGATGCGTCCGAATGAGAAG GAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCAT CATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAG TCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCA AGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTA ATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGC TCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGT CAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCT GTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAA CCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTT CATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTT CCACTACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAGTTT GGTCCTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACATCA CCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGA ATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAA ATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCCTCCTCGGCCTTTCC TCATGCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGA AGCTGTACAGGTCCTTGTCCATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCT TCATCATGTATCACATTCAGGCAGGAAAATGTTCTTGCTTGCCCCTCCCCGCCCCAATTC CTGCATGCCCCGTGAAAATAAATGGGGCAACCATTCTTATTTATCCCTACCATATATACA CACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTC TGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGG ATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTAGGCATTGGGGAGTAAGCGCAGGACTTGC TGCTTGTGCAAGTGTGCATGTTGAAAACAACGGAAATAATGCTCTGCCTTAATTGTAATA ATTGTAATTTATGTTCTACCAACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTG CGCGATCTGGGTCATTGTTCTCG