Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0291100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:11262587:11263593:1 gene:Os12g0291100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3 description:Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment). (Os12t0291100-01);Similar to Ribulose bisphosphate carboxylase small chain. (Os12t0291100-02);Non-protein coding transcript. (Os12t0291100-03)
Sequence	ATGGCCCCCACCGTGATGGCCTCCTCGGCCACCTCCGTGGCTCCATTCCAAGGGCTCAAG TCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCACCAACTCGGGCTTCGGCAACGTCAGC AATGGCGGAAGGATCAAGTGCATGCAGGTGTGGCCAATTGAGGGCATCAAGAAGTTCGAG ACCCTATCGTACCTGCCACCACTCACCGTGGAGGATCTTTTGAAGCAGATCGAGTACCTG CTTCGATCCAAGTGGGTGCCTTGCCTCGAGTTCAGCAAGGTTGGATTCGTCTACCGTGAG AACCACAGGTCTCCCGGGTACTACGATGGCAGGTATTGGACCATGTGGAAGCTGCCCATG TTCGGCTGCACCGATGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCCTAC CCCGATGCCTTTGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGTTGATTAGC TTCATCGCCTACAAGCCCCCAGGTTGCGAGGAGTCTGGTGGCAACTAA

Peptide Sequence

PEP ID	Os12t0291100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:11262587:11263593:1 gene:Os12g0291100 transcript:Os12t0291100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3 description:Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment). (Os12t0291100-01);Similar to Ribulose bisphosphate carboxylase small chain. (Os12t0291100-02);Non-protein coding transcript. (Os12t0291100-03)
Sequence	MAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFE TLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPM FGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESGGN

Transcript Sequence

Transcript ID	Os12t0291100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:11262587:11263593:1 gene:Os12g0291100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RuBisCO small subunit 3, Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase Small Subunit 3 description:Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment). (Os12t0291100-01);Similar to Ribulose bisphosphate carboxylase small chain. (Os12t0291100-02);Non-protein coding transcript. (Os12t0291100-03)
Sequence	AACAGCACTGCTACTGGACATACTCTACTACTACTAGCCAGTAAGCTAGCTAACTAACTA CGTGGCTATGGCCCCCACCGTGATGGCCTCCTCGGCCACCTCCGTGGCTCCATTCCAAGG GCTCAAGTCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCACCAACTCGGGCTTCGGCAA CGTCAGCAATGGCGGAAGGATCAAGTGCATGCAGGTGTGGCCAATTGAGGGCATCAAGAA GTTCGAGACCCTATCGTACCTGCCACCACTCACCGTGGAGGATCTTTTGAAGCAGATCGA GTACCTGCTTCGATCCAAGTGGGTGCCTTGCCTCGAGTTCAGCAAGGTTGGATTCGTCTA CCGTGAGAACCACAGGTCTCCCGGGTACTACGATGGCAGGTATTGGACCATGTGGAAGCT GCCCATGTTCGGCTGCACCGATGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAA GGCCTACCCCGATGCCTTTGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGTT GATTAGCTTCATCGCCTACAAGCCCCCAGGTTGCGAGGAGTCTGGTGGCAACTAAGCTAA GATCAAGCATCGCGCTGGTGGATTGCTGCCTATAATAATAGTATGCAGCTTTGTTTTGGG CTATGTTGATGATATATCAATATATAATATGCTATATATTTTTATTTTACAGTTTGGTTA TGTACCATCTCAATGGCCTCTGCTCTTAACACATATGTAATAATCTCTTCCCTCCCTCTC CGGCCGGTTTTATTGTAAGAGTACTACAATTATCGTTGGGTGAGGATATGTGAAAACAAA GCTCCGGCTATATACACACAAGATATGTATCTAGAGCATATCTGATAAATTCGTCG