Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0288400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:11045896:11057114:-1 gene:Os12g0288400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb protein). (Os12t0288400-01)
Sequence	ATGAGCGGGTTCTTGGCGGTGGTGGGGAAGGTCGGGACCTTCCTGCTGTGGCTGCTCTTC CTCGTGCTGCAGACGGCCACCAAGATCGTCGGCAGCCTCCTCGCCGCGGGGCCACCACCG GCTGACGCCCAGGAAGCCGCGGCGGCGGCGGCTGCGCGGCGCAGGTCGCCGCCGGCGTCG CCGCACAGCGGTGGCGGTGCCACGGACCCGTACCAGCCTCCGCAGCTGTGGGACCCGCCG CCGCCGTCGTCTCCGTACTCGGCTGGCCACGCGGCGGACGAATACTCCTCGTCCTCCAGC TACCGGCGGCGCGGGGCGAGCGCGCCGCCGGCCGAGGACGTGGTGGTTTCCTCCAGCTAC TCGCGCCCCGCCGCGGCGGTGGCGTCGGCTCCCCAGGCTTGTACCGTGTCGTCGGCGCCT CCGCTGAGGGCGGTCGAGACCCGGTCGCCGGCACCGTCCAGGGCGGCGGCGGCGGTTGGG GGTAAGCGGCCGAAGCTGGAGAGGAAGTATTCCAAGATTGTGGATCAGTACCGCTCATTG GATGAGGTTATTGAAGCACTAGCGCAAGCTGGTCTTGAGTCTTCTAATTTAATAATTGGA ATTGATTTCACAAAGAGTAATGAATGGACAGGGAAGCGTTCCTTCAATGGTATGAGCCTA CATCATATTGGTGATTCCCCAAATCCTTATGAGCAGGCAATCACAATTATTGGGCAAACC TTGTCAGCTTTTGATGAGGATAATTTAATTCCTTGCTATGGTTTTGGAGATGCATCTACG CACGATCAAGATGTGTTCGCTTTCTATCCTGACGAAAGACCATGCAACGGTTTTCAGGAG GCTTTGGCCCGATATAGAGAAATTGTTCCTCATCTTCGTCTTTCCGGTCCTACATCATTC TCTCCAATAATTGAAATGGCCACAACCATTGTTGAACAAAGTGGTGGCCAGTACCATGTA TTAGTAATAATCGCTGATGGACAGGTTACACGAAGTGTAGATACTGAATTTGGCCAGTTA AGTACTCAGGAGCAGATGACTGTTGATGCTATTGTACAAGCGAGTGAATTTCCCTTGTCT ATAATTTTGGTTGGAGTTGGAGATGGTCCATGGGATATGATGAAGGAATTTGACGACAAC ATACCTGCTAGGTCTTTTGACAATTTCCAGTTTGTCAACTTCACTTCAATAATGTCAAAG AAAATCAGTCAGAGCAAGAAGGAAACAGAATTTGCCCTTTCGGCACTCATGGAAATTCCT TTGCAGTACAAGGCAACATTAGAGCTTGGAATTTTAGGGCGTCGGTTCGCGAAGTCACCT GAGCGAGTTCCACTGCCCCCTCCCTTTGCAAGCTATAATACAATCTCGAGAGCAGCACCA TCTCGAGCAAATAGCTTCCGCAGTATGCCTTCTCATCCTAGGGATGAGGCACCTGTAGAT TCAGCAATCACAGCATCAGTTACATCCCCACCAAGCGTGGATGCTAGAGCAGCAGAACCT CAACTCTGCCCAGTTTGCCTCTCCAAACCCCGGGACATGGCTTTTGGTTGCGGACACCAG ACATGTGCTGAATGTGGACCGCAAGTCGAACATTGCCCTATCTGTCGAAGGCCAATTGAT ACAAGAGTAAAACTGTACTAA

Peptide Sequence

PEP ID	Os12t0288400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:11045896:11057114:-1 gene:Os12g0288400 transcript:Os12t0288400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb protein). (Os12t0288400-01)
Sequence	MSGFLAVVGKVGTFLLWLLFLVLQTATKIVGSLLAAGPPPADAQEAAAAAAARRRSPPAS PHSGGGATDPYQPPQLWDPPPPSSPYSAGHAADEYSSSSSYRRRGASAPPAEDVVVSSSY SRPAAAVASAPQACTVSSAPPLRAVETRSPAPSRAAAAVGGKRPKLERKYSKIVDQYRSL DEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLHHIGDSPNPYEQAITIIGQT LSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEALARYREIVPHLRLSGPTSF SPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASEFPLS IILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTSIMSKKISQSKKETEFALSALMEIP LQYKATLELGILGRRFAKSPERVPLPPPFASYNTISRAAPSRANSFRSMPSHPRDEAPVD SAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFGCGHQTCAECGPQVEHCPICRRPID TRVKLY

Transcript Sequence

Transcript ID	Os12t0288400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:11045896:11057114:-1 gene:Os12g0288400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb protein). (Os12t0288400-01)
Sequence	AGCCAACCCAAGCGTCAGCTCTGGAAAGCAACCCACCCTACTCACCCTCCTCCTCTCCCT CACTCACTCCGTGGTCGTCGTCCTCCTCGGTCTCCTCGCCCCGGTCCACCCCCACTGACA AGTGGGCCCACCCCACCATCCCCCCCGGCTGCGTCCGCGGCGAGCAGCGGAGGCCTCCAC CTCGCCGGCGGCGGCATGAGCGGGTTCTTGGCGGTGGTGGGGAAGGTCGGGACCTTCCTG CTGTGGCTGCTCTTCCTCGTGCTGCAGACGGCCACCAAGATCGTCGGCAGCCTCCTCGCC GCGGGGCCACCACCGGCTGACGCCCAGGAAGCCGCGGCGGCGGCGGCTGCGCGGCGCAGG TCGCCGCCGGCGTCGCCGCACAGCGGTGGCGGTGCCACGGACCCGTACCAGCCTCCGCAG CTGTGGGACCCGCCGCCGCCGTCGTCTCCGTACTCGGCTGGCCACGCGGCGGACGAATAC TCCTCGTCCTCCAGCTACCGGCGGCGCGGGGCGAGCGCGCCGCCGGCCGAGGACGTGGTG GTTTCCTCCAGCTACTCGCGCCCCGCCGCGGCGGTGGCGTCGGCTCCCCAGGCTTGTACC GTGTCGTCGGCGCCTCCGCTGAGGGCGGTCGAGACCCGGTCGCCGGCACCGTCCAGGGCG GCGGCGGCGGTTGGGGGTAAGCGGCCGAAGCTGGAGAGGAAGTATTCCAAGATTGTGGAT CAGTACCGCTCATTGGATGAGGTTATTGAAGCACTAGCGCAAGCTGGTCTTGAGTCTTCT AATTTAATAATTGGAATTGATTTCACAAAGAGTAATGAATGGACAGGGAAGCGTTCCTTC AATGGTATGAGCCTACATCATATTGGTGATTCCCCAAATCCTTATGAGCAGGCAATCACA ATTATTGGGCAAACCTTGTCAGCTTTTGATGAGGATAATTTAATTCCTTGCTATGGTTTT GGAGATGCATCTACGCACGATCAAGATGTGTTCGCTTTCTATCCTGACGAAAGACCATGC AACGGTTTTCAGGAGGCTTTGGCCCGATATAGAGAAATTGTTCCTCATCTTCGTCTTTCC GGTCCTACATCATTCTCTCCAATAATTGAAATGGCCACAACCATTGTTGAACAAAGTGGT GGCCAGTACCATGTATTAGTAATAATCGCTGATGGACAGGTTACACGAAGTGTAGATACT GAATTTGGCCAGTTAAGTACTCAGGAGCAGATGACTGTTGATGCTATTGTACAAGCGAGT GAATTTCCCTTGTCTATAATTTTGGTTGGAGTTGGAGATGGTCCATGGGATATGATGAAG GAATTTGACGACAACATACCTGCTAGGTCTTTTGACAATTTCCAGTTTGTCAACTTCACT TCAATAATGTCAAAGAAAATCAGTCAGAGCAAGAAGGAAACAGAATTTGCCCTTTCGGCA CTCATGGAAATTCCTTTGCAGTACAAGGCAACATTAGAGCTTGGAATTTTAGGGCGTCGG TTCGCGAAGTCACCTGAGCGAGTTCCACTGCCCCCTCCCTTTGCAAGCTATAATACAATC TCGAGAGCAGCACCATCTCGAGCAAATAGCTTCCGCAGTATGCCTTCTCATCCTAGGGAT GAGGCACCTGTAGATTCAGCAATCACAGCATCAGTTACATCCCCACCAAGCGTGGATGCT AGAGCAGCAGAACCTCAACTCTGCCCAGTTTGCCTCTCCAAACCCCGGGACATGGCTTTT GGTTGCGGACACCAGACATGTGCTGAATGTGGACCGCAAGTCGAACATTGCCCTATCTGT CGAAGGCCAATTGATACAAGAGTAAAACTGTACTAATTTCACCATCTGTGATGCATAAAA GGTTTTCGTCGAAGGCCGCATCCATGGAGGACTCTAATAGGCTGTTATAGGAGTGCAGTA TGTACTAATGTTGATAAAAGATAGCGGTCAAATAATCACAATAAAACTTGTATCCTCTTC TGATGTAGGTGTGGTGAGTTAATTGTTATATTTGTCATTACAAGGAGTAACGGAATAATG TGGGACAGGGAGAAGTCACTTTGACTCCTTCCAGCTCTTCCAAATGGTTTACCCAGGAGG TATTCGAACGCT