Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0288000-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:10999138:11001938:-1 gene:Os12g0288000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA278 description:Similar to cDNA clone:J023146F15, full insert sequence. (Os12t0288000-01);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-02);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-03)
Sequence	ATGATGGCAGAGACGATGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTC CCATTGAGCATGGTACTGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTA TCATTCAATAGTGGGATGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACC GTCACCATGTTACCCTTCGCCTTCTGGTTCGAGAGGCAAATGATGAAAAAGGTTAACTAC AAGGTACTGGGCTGGATATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTA CACTACTACGGCCTACGCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTC CCCGTCGTTACCTTCATCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACG CGGTCTGGCATGATAAAGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTG AGCCTGTACAGGGGCAAGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAG CTGCGGGCGATCGGCGGCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATC GGGACGCTCTTCCTTTGCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCC AAAGTGAACAAGGAGTTCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGG ACAATCCAGGCGGTGGTGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTC CACTGGGATCTGCAGCTGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACC TTCTGCTTGATCACGTGGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAAC TCGCTTGCGCTGATCATCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCT GTCGGGAGGTGA

Peptide Sequence

PEP ID	Os12t0288000-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:10999138:11001938:-1 gene:Os12g0288000 transcript:Os12t0288000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA278 description:Similar to cDNA clone:J023146F15, full insert sequence. (Os12t0288000-01);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-02);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-03)
Sequence	MMAETMTTKTKPGMAERLLLPLSMVLVQLFTIGALLLAKLSFNSGMAPFVLLAYRNLIGT VTMLPFAFWFERQMMKKVNYKVLGWIFFNALFGIVLAMGLHYYGLRATNAGYTVNFLNLV PVVTFIIAAIFRLEKLKLKTRSGMIKVIGTVICVVGTMVVSLYRGKLLHLWPTHLLKPAQ LRAIGGSDDSTFPTHHNMLIGTLFLCGSCLSYAFWFIVQAKVNKEFPSKYFSTMLACLMG TIQAVVIGIAVDRDRSAWALHWDLQLITIIYSGVFNTAATFCLITWAVSRRGPTYPSMFN SLALIITVVLDSMLLGSDISVGR

Transcript Sequence

Transcript ID	Os12t0288000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10999138:11001938:-1 gene:Os12g0288000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA278 description:Similar to cDNA clone:J023146F15, full insert sequence. (Os12t0288000-01);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-02);Similar to Integral membrane protein DUF6 containing protein, expressed. (Os12t0288000-03)
Sequence	AGAACACTTATCTTCTCTCTTGAAAAAGCTCTAAGGGTACCAACATGATGGCAGAGACGA TGACCACGAAGACGAAGCCAGGGATGGCGGAGCGGTTACTGCTCCCATTGAGCATGGTAC TGGTCCAGCTATTCACCATAGGTGCCCTCCTCCTCGCGAAGCTATCATTCAATAGTGGGA TGGCACCTTTCGTCCTCCTCGCATACCGCAACCTCATTGGCACCGTCACCATGTTACCCT TCGCCTTCTGGTTCGAGAGGCAAATGATGAAAAAGGTTAACTACAAGGTACTGGGCTGGA TATTTTTCAACGCTTTGTTCGGAATTGTTTTGGCTATGGGGCTACACTACTACGGCCTAC GCGCTACCAATGCTGGATACACCGTCAATTTCCTAAATTTGGTCCCCGTCGTTACCTTCA TCATTGCAGCGATCTTCCGATTGGAGAAGCTGAAGCTGAAGACGCGGTCTGGCATGATAA AGGTGATTGGCACGGTGATCTGTGTTGTGGGCACCATGGTGGTGAGCCTGTACAGGGGCA AGCTGCTGCATTTGTGGCCTACCCACCTGCTGAAGCCGGCGCAGCTGCGGGCGATCGGCG GCAGCGACGACTCCACCTTCCCTACCCACCACAACATGCTCATCGGGACGCTCTTCCTTT GCGGCAGTTGCCTCAGCTACGCCTTCTGGTTCATCGTTCAGGCCAAAGTGAACAAGGAGT TCCCATCTAAGTACTTCTCGACGATGCTCGCATGCTTGATGGGGACAATCCAGGCGGTGG TGATCGGGATCGCCGTCGACCGGGACCGGTCGGCATGGGCACTCCACTGGGATCTGCAGC TGATCACCATCATCTATTCGGGGGTTTTCAACACGGCTGCCACCTTCTGCTTGATCACGT GGGCGGTGTCACGGCGAGGGCCAACCTACCCCTCCATGTTCAACTCGCTTGCGCTGATCA TCACCGTCGTCCTTGACTCGATGCTGCTTGGAAGCGACATCTCTGTCGGGAGGTGAGAAT TAATACTGCGACAGCATGTCTGTATATTCAGTCTTAGGGTCGTACTGTTTTATATATGTA CGGTATCAAGTCCGGCAAAAGCATGGACTAGCTACCACATGAGAGGCACTATATATACTA CTCCATCCGTTTCATATTATAAGACTTTATAACATTGCCCACATTTATATAGATGTTAAT GAATCTATACACATATATGTCTAGATTCATTTACATCTATATGAATATGGATAATACTAT AGAAAGTCTTATAATATATAACATGCTTTGCTTGCAGCTTGCTAGGGGCATTTATGATAA TCATTGGCCTCTATTCCTTCCTCTGGGGAAAAGGGAAGGAGATAAAAGAGCAGCAGCAGC AAGTTCCCACGAATACAGAGGCAGATCAGAGCAAAATCACTTATCCTAAAAGTAATGGTG AGGTGCGAATTATGTTGGATACATAGACAATGTAGATTGTAGAGATCGCTAGATATAACA AAGGATTGTATTTGGATTACTATAGACTAGAATTAAGTCGCTTGTTTATTGATGAGGTAT ATGTTGATTCTTCTATCGTCAATAGAGAAAGATAGGAAGGTGAGTGTAGTTT