Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0285600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:10862295:10872221:-1 gene:Os12g0285600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os12t0285600-01)
Sequence	ATGAACCCGCTCTGCTGCATCGCGCCGGTCTCGCTCGACAGCGCCGTCGAGCACCACCAC CAGCCGCCGCGCATCCTCGCGGCGGCGGCCGCGGCGCCGACGTCGCCCACTCCGCCAGCG GCGGCGGTGGCTGCGCAGGTGGTGCTGGATGCGGCGCAGGCGGCGGTTGCGGGGGTGCTG CACAAGTGGGTGAACTACGGGAAGGGGTGGCGGCTGAGGTGGTTCGTGCTCGAGGGCGGG GTGCTGTCCTACTACAAGCTCCGGGTTGGAGGGGGCGGTGATTCCGCGGCGTCGCCGGCG GTGGCGGCGAGGGTGATCGGGGAGGGTGGCGCGCTGCGGCGGGCGCGGGAGGAGGCCGCG GCGGCGGGGAAGCAGTGGAAGCCGTTCGGGGAGATACACCTCAAGGTTTCGTCAATCCGT GCAAGCAAGTCGGATGATAAGAGGTTGTATATATTCAGTGGAACAAAGACGTTACACTTG AGGTGTGAAACTGAGGAAGATAGGAATGCCTGGATACAGGCTCTGCAAGCGGCAAAGGAT CGCTTCCCACGTTCACTAACGAGCAATGATTTTAGTCCCATGTCTGATGTTTTGTTGTCC ACGGAGAAGCTGAGGGTGCGGCTGCTGCAGGAGGGGCTGAATGAAACAGTGGTCAAGGAA TGTGAGTCTATTATGATGACTGAGCTTTTGGAACTGCACAACCAGATGAAGTCACAGCAG CAGCAGTATTCTATTTTGATAGATCGGCTCCGACAACTAGAGACAGAGAAAGTTGAGCTG GAGAGAACTGTTGTGCATGAAACTAAGGAGAGGGAAGCACATGGATATGCTAATGGCAGA TATAGTGATTTTTATTCAGTTTTATCAGGAGGAAGTGCAAGCGAGTCTGATCCAGATACT GCAAGTCAAGTGGCAGATGTTGAAACTGATGAAGATGAAGTGATGTACTTTGATACAAGA GACTTCTTGTCTGCAGAGTCTCTTCGAAGTGCTTCATGTCGAAGGAGAGAACTTTTGACA AATGGTTGCAATGGATTAGAACATACAGACCCTGCTGCAAATGTCGTCAAAACTACTCAG TATCCCTCTGTTAAACGTCGAGATAAGTTACCTGAGCCAAAAGAAAAAGAAAACCCAGTA GGGTTGTGGTCAATAATTAAAGAAAATATTGGAAAAGATCTCTCGGGTGTTTGTCTGCCT GTTTATTTCAATGAGCCACTGTCTTCTTTGCAAAAATGTTTTGAAGATCTCGAGTACTCT TACTTGGTTGACCATGCACTACAGTGGGGAAAACAGGGCGATAGCTTGATGAGGACACTT CATGTTGCGGCATTTGCAGTATCAGGCTATGCTTCAACTGAAGGTCGGCAATGCAAACCG TTCAATCCTTTACTGGGTGAAACATATGAAGCTGATTATCCAGATAAAGGACTTCGATTT TTCTCTGAAAAGGTCAGTCATCACCCAATGGTTGTTGCATGTCACTGTGAAGGAAGAGGT TGGAAGTTTTGGGGGGATTCAAATCTGAAAGGGAAGTTCTGGGGTCGATCAATTCAACTT GATCCTATTGGTGTTCTAACTCTCCAGTTTGATGATGGGGAAACGTTTCAATGGAGTAAA GTAACTACTTCCATATACAATATCATAATAGGCAAAATTTATTGTGACCACTATGGTACA ATGCGCATCAAAGGAAGTGGCGACTACTCTTGCAAGCTTAAATTCAAAGAGCAGTCAATA ATTGATCGAAACCCACACCAGGTGCATGGATTTGTGCAAGATAATAGAACAGGGCAGAAA GTTGCTATGTTAATCGGAAAATGGGATGAAGCTATGTATTATGTTCTTGGGGATCCAAGT GCAAAACCCAAGGGGTATGACCCAATGTCAGAAGCAGTTCTTTTGTGGGAGAGAGACAAG TCTCTGAACCAAACACGATACAACCTTTCCCCTTTTGCAATTTCACTAAATGAATTGACA GCTAACCTGGCGAAGAAGTTGCCTCCTACTGATTCTCGTCTGAGGCCTGATCAAAGGCAT CTTGAAAATGGTGAATATGAGATGGCTAATGCAGAGAAACTTAGGCTTGAACAACTGCAG CGACAGGCCCGAAGGTTACAAGAGAAAGGATGGCAACCCAGGTGGTTTAGCAAGGATGAC GACGACAGCTACCGCTACATTGGCGGTTACTGGGAAGCAAGGGAGAAGGGGAACTGGGAT GGGATTCCAGACATCTTCGGTCAGCGCAGCGCTTCACCTGGGTGGTCATAG

Peptide Sequence

PEP ID	Os12t0285600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:10862295:10872221:-1 gene:Os12g0285600 transcript:Os12t0285600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os12t0285600-01)
Sequence	MNPLCCIAPVSLDSAVEHHHQPPRILAAAAAAPTSPTPPAAAVAAQVVLDAAQAAVAGVL HKWVNYGKGWRLRWFVLEGGVLSYYKLRVGGGGDSAASPAVAARVIGEGGALRRAREEAA AAGKQWKPFGEIHLKVSSIRASKSDDKRLYIFSGTKTLHLRCETEEDRNAWIQALQAAKD RFPRSLTSNDFSPMSDVLLSTEKLRVRLLQEGLNETVVKECESIMMTELLELHNQMKSQQ QQYSILIDRLRQLETEKVELERTVVHETKEREAHGYANGRYSDFYSVLSGGSASESDPDT ASQVADVETDEDEVMYFDTRDFLSAESLRSASCRRRELLTNGCNGLEHTDPAANVVKTTQ YPSVKRRDKLPEPKEKENPVGLWSIIKENIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYS YLVDHALQWGKQGDSLMRTLHVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRF FSEKVSHHPMVVACHCEGRGWKFWGDSNLKGKFWGRSIQLDPIGVLTLQFDDGETFQWSK VTTSIYNIIIGKIYCDHYGTMRIKGSGDYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGQK VAMLIGKWDEAMYYVLGDPSAKPKGYDPMSEAVLLWERDKSLNQTRYNLSPFAISLNELT ANLAKKLPPTDSRLRPDQRHLENGEYEMANAEKLRLEQLQRQARRLQEKGWQPRWFSKDD DDSYRYIGGYWEAREKGNWDGIPDIFGQRSASPGWS

Transcript Sequence

Transcript ID	Os12t0285600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10862295:10872221:-1 gene:Os12g0285600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pleckstrin homology-type domain containing protein. (Os12t0285600-01)
Sequence	ATTACTCCGCCACACCCAAGCCACGGTACGGCCTCCTCCGCCGCGGCGATCTCCATGGCC TCGCAAACCCTAGCCACCGGCGGCGGCGGCGGCGGTGGAGGCGGCGCGGCATTCTTCTGA GAGGCTCCGATCCGGGGGCGGAGGGTGGTGGTGGGGGGTTTCGTCGATGAACCCGCTCTG CTGCATCGCGCCGGTCTCGCTCGACAGCGCCGTCGAGCACCACCACCAGCCGCCGCGCAT CCTCGCGGCGGCGGCCGCGGCGCCGACGTCGCCCACTCCGCCAGCGGCGGCGGTGGCTGC GCAGGTGGTGCTGGATGCGGCGCAGGCGGCGGTTGCGGGGGTGCTGCACAAGTGGGTGAA CTACGGGAAGGGGTGGCGGCTGAGGTGGTTCGTGCTCGAGGGCGGGGTGCTGTCCTACTA CAAGCTCCGGGTTGGAGGGGGCGGTGATTCCGCGGCGTCGCCGGCGGTGGCGGCGAGGGT GATCGGGGAGGGTGGCGCGCTGCGGCGGGCGCGGGAGGAGGCCGCGGCGGCGGGGAAGCA GTGGAAGCCGTTCGGGGAGATACACCTCAAGGTTTCGTCAATCCGTGCAAGCAAGTCGGA TGATAAGAGGTTGTATATATTCAGTGGAACAAAGACGTTACACTTGAGGTGTGAAACTGA GGAAGATAGGAATGCCTGGATACAGGCTCTGCAAGCGGCAAAGGATCGCTTCCCACGTTC ACTAACGAGCAATGATTTTAGTCCCATGTCTGATGTTTTGTTGTCCACGGAGAAGCTGAG GGTGCGGCTGCTGCAGGAGGGGCTGAATGAAACAGTGGTCAAGGAATGTGAGTCTATTAT GATGACTGAGCTTTTGGAACTGCACAACCAGATGAAGTCACAGCAGCAGCAGTATTCTAT TTTGATAGATCGGCTCCGACAACTAGAGACAGAGAAAGTTGAGCTGGAGAGAACTGTTGT GCATGAAACTAAGGAGAGGGAAGCACATGGATATGCTAATGGCAGATATAGTGATTTTTA TTCAGTTTTATCAGGAGGAAGTGCAAGCGAGTCTGATCCAGATACTGCAAGTCAAGTGGC AGATGTTGAAACTGATGAAGATGAAGTGATGTACTTTGATACAAGAGACTTCTTGTCTGC AGAGTCTCTTCGAAGTGCTTCATGTCGAAGGAGAGAACTTTTGACAAATGGTTGCAATGG ATTAGAACATACAGACCCTGCTGCAAATGTCGTCAAAACTACTCAGTATCCCTCTGTTAA ACGTCGAGATAAGTTACCTGAGCCAAAAGAAAAAGAAAACCCAGTAGGGTTGTGGTCAAT AATTAAAGAAAATATTGGAAAAGATCTCTCGGGTGTTTGTCTGCCTGTTTATTTCAATGA GCCACTGTCTTCTTTGCAAAAATGTTTTGAAGATCTCGAGTACTCTTACTTGGTTGACCA TGCACTACAGTGGGGAAAACAGGGCGATAGCTTGATGAGGACACTTCATGTTGCGGCATT TGCAGTATCAGGCTATGCTTCAACTGAAGGTCGGCAATGCAAACCGTTCAATCCTTTACT GGGTGAAACATATGAAGCTGATTATCCAGATAAAGGACTTCGATTTTTCTCTGAAAAGGT CAGTCATCACCCAATGGTTGTTGCATGTCACTGTGAAGGAAGAGGTTGGAAGTTTTGGGG GGATTCAAATCTGAAAGGGAAGTTCTGGGGTCGATCAATTCAACTTGATCCTATTGGTGT TCTAACTCTCCAGTTTGATGATGGGGAAACGTTTCAATGGAGTAAAGTAACTACTTCCAT ATACAATATCATAATAGGCAAAATTTATTGTGACCACTATGGTACAATGCGCATCAAAGG AAGTGGCGACTACTCTTGCAAGCTTAAATTCAAAGAGCAGTCAATAATTGATCGAAACCC ACACCAGGTGCATGGATTTGTGCAAGATAATAGAACAGGGCAGAAAGTTGCTATGTTAAT CGGAAAATGGGATGAAGCTATGTATTATGTTCTTGGGGATCCAAGTGCAAAACCCAAGGG GTATGACCCAATGTCAGAAGCAGTTCTTTTGTGGGAGAGAGACAAGTCTCTGAACCAAAC ACGATACAACCTTTCCCCTTTTGCAATTTCACTAAATGAATTGACAGCTAACCTGGCGAA GAAGTTGCCTCCTACTGATTCTCGTCTGAGGCCTGATCAAAGGCATCTTGAAAATGGTGA ATATGAGATGGCTAATGCAGAGAAACTTAGGCTTGAACAACTGCAGCGACAGGCCCGAAG GTTACAAGAGAAAGGATGGCAACCCAGGTGGTTTAGCAAGGATGACGACGACAGCTACCG CTACATTGGCGGTTACTGGGAAGCAAGGGAGAAGGGGAACTGGGATGGGATTCCAGACAT CTTCGGTCAGCGCAGCGCTTCACCTGGGTGGTCATAGCTTACCTACCCCCTCTCCCTGTG TAGTGTAATCCCACATTTCTTTACAGAAAAAAAGTATGTTACCTTCTATATATACATATA TTGAAGCAATGTCCATATGTGTGCCGATGTACTGGATTCAGAGAGCCGAGATGTACTGGT AAAAACACGGCAAGATTACGTTAGTAGGAATTCGGACCCCAAGTAGGTTAGATTAATCCA AAGTTTGAGTATAATTTTATTGTCGGCCAGAAGATGTCCTGGTTTTGAGGCTACTCTTGT ACATTTAAATTTTCTCAACTCACGAGTACTTGAGAGCTGTTTCCTGCTAGAACCTCAAGT ACAAGGCAATATATTAGTTGTTTCCT