Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0283900-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:10766624:10768939:1 gene:Os12g0283900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-01);Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-02)
Sequence	ATGGCTTCCCCCCTCGCCGTCTTCCACCCCGCCTCCGCCACCGCCGCCGCCGCCGCTCGC CGTCACCACCCCCCGCGCCCGCCGCACCTGCACCTCCACCTCCCGCTCCACCACCAGCCT TCGTCGCCCCGCCGCAGGTTCGCTGCCGAGTTCGCGGTCGGCGGTGCTGACGGTGGCACC GGCGGCGGCGGCGGGAGGAGGGCGAGGGGAGGCGGTGACGTCGATGTCGCCGCGGTCGGC GCGGCGCTGCGGGACGCCAGGACGGCCGACGAAGTGGAGACCCTGGTGAAGGGCTTCCTG GACGACGGTGGCGGCGGCGAGGAGCACCTGCCGCTCCAGGTGTATACCTCGGTGATCCGG GGGCTGGGCAAGGAGAGGCGCCTCGACGCCGCGTTCGCCGTCGTGGAGCACCTCAAGAGG GGAAGCGGGAGTGGCGGCGGCGGCGGCGGCGTCAACCAGTTCGTCTACAACTGCCTGCTG GGCGCGGTCAAGAACAGTGGGGAATTTGGGAGGATCCACGATGTGCTTGCAGACATGGAG GCACAGGGGGTTCCCCCAAACATTGTGACATTCAACACTCTGATGTCAATCTATGTCGAA CAAGGCAAGATTGATGAGGTCTTCAGGGTGTTTGACACCATCGAGGGCAGTGGCCTGGTG CCCACCGCGGCGACATACTCGACAGTGATGTCGGCCTACAAGAAGGCTGGCGATGCATTC GCGGCACTCAAGTTCATCACCAAGCTAAGGGAGATGTACAACAAGGGTGAATTGGCGGTG AATCATGAAGATTGGGACCGAGAATTTGTCAAGTTTGAGAAGCTGACTGTCCGTGTCTGC TATATGGCGATGCGGCGGTCTCTTGTGGGTGGTGAGAATCCAGTAGGTGAGGTGCTGAAA GTTCTTCTTGGCATGGATGAAGCTGGGGTGAAGCCAGACAGGAGAGATTACGAGCGGCTT GTGTGGGCATGTACAGGTGAGGAGCATTACACCATTGCCAAGGAGCTGTACCAAAGGATC CGTGAGCGTGGTGATGGCGTGATCAGCTTATCTGTGTGCAATCATCTGATTTGGCTGATG GGCAAGGCTAAGAAGTGGTGGGCAGCTCTTGAGATTTATGAGGATTTGTTGGACAAAGGC CCCAAACCGAATAACTTGTCGTATGAGCTCATCATGTCACATTTCAATATTCTACTCAAT GCTGCAAAGAGAAGGGGCATTTGGAGGTGGGGTGTAAGGCTGCTTGATAAGATGCAACAG AAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAATGCCGTCCTTCTTGCGTGTTCTAGAGCA GCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATAGATCAAGGGTTGACACCG GATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTGAGAAGGGAAAGCTGTATGATGAG GCACTCCGAGTTTGGGAACACATGTGCAAGGTAGGCGTTAAGCCGAACCTACATGCATAT ACAATCTTAGTATCAATTTACATTGGCAAGGGGAACCATGCTATGGTAGATTCTGTTCTT CGTGGTATGCTGTCAGCAAAGATAGAACCAACTGTTGTTACGTTCAATGCGATAATCAGC GCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGGTTCCATAGGATGAAAGTG CAGAACATTGAGCCAAATGAAATTACATATCAGATGTTGATTGAAGCTCTTGTACAAGAT GGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGCAACCAAGGGCTTGAGCTT CCTGCAAAATCATACGACACTGTAATGGAGGCATGCCAAGATTATGGTTCCCTCATAGAT CTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCCATCAGGATAGAGAACAAG TTTTCGAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACAAAACATTTTGGTAGCACT GGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATCATGTAG

Peptide Sequence

PEP ID	Os12t0283900-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:10766624:10768939:1 gene:Os12g0283900 transcript:Os12t0283900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-01);Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-02)
Sequence	MASPLAVFHPASATAAAAARRHHPPRPPHLHLHLPLHHQPSSPRRRFAAEFAVGGADGGT GGGGGRRARGGGDVDVAAVGAALRDARTADEVETLVKGFLDDGGGGEEHLPLQVYTSVIR GLGKERRLDAAFAVVEHLKRGSGSGGGGGGVNQFVYNCLLGAVKNSGEFGRIHDVLADME AQGVPPNIVTFNTLMSIYVEQGKIDEVFRVFDTIEGSGLVPTAATYSTVMSAYKKAGDAF AALKFITKLREMYNKGELAVNHEDWDREFVKFEKLTVRVCYMAMRRSLVGGENPVGEVLK VLLGMDEAGVKPDRRDYERLVWACTGEEHYTIAKELYQRIRERGDGVISLSVCNHLIWLM GKAKKWWAALEIYEDLLDKGPKPNNLSYELIMSHFNILLNAAKRRGIWRWGVRLLDKMQQ KGLKPGSREWNAVLLACSRAAETSAAVDIFKRMIDQGLTPDVVSYGALLSALEKGKLYDE ALRVWEHMCKVGVKPNLHAYTILVSIYIGKGNHAMVDSVLRGMLSAKIEPTVVTFNAIIS ACVRNNKGGSAFEWFHRMKVQNIEPNEITYQMLIEALVQDGKPRLAYEMYMRACNQGLEL PAKSYDTVMEACQDYGSLIDLNSLGPRPVKKVEPIRIENKFSSSYYVGDLPSSTKHFGST GTSSLYRYRTERWIM

Transcript Sequence

Transcript ID	Os12t0283900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10766624:10768939:1 gene:Os12g0283900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-01);Heat shock protein DnaJ, conserved site domain containing protein. (Os12t0283900-02)
Sequence	GGCCACACCAGCGCCCCAATGGCTTCCCCCCTCGCCGTCTTCCACCCCGCCTCCGCCACC GCCGCCGCCGCCGCTCGCCGTCACCACCCCCCGCGCCCGCCGCACCTGCACCTCCACCTC CCGCTCCACCACCAGCCTTCGTCGCCCCGCCGCAGGTTCGCTGCCGAGTTCGCGGTCGGC GGTGCTGACGGTGGCACCGGCGGCGGCGGCGGGAGGAGGGCGAGGGGAGGCGGTGACGTC GATGTCGCCGCGGTCGGCGCGGCGCTGCGGGACGCCAGGACGGCCGACGAAGTGGAGACC CTGGTGAAGGGCTTCCTGGACGACGGTGGCGGCGGCGAGGAGCACCTGCCGCTCCAGGTG TATACCTCGGTGATCCGGGGGCTGGGCAAGGAGAGGCGCCTCGACGCCGCGTTCGCCGTC GTGGAGCACCTCAAGAGGGGAAGCGGGAGTGGCGGCGGCGGCGGCGGCGTCAACCAGTTC GTCTACAACTGCCTGCTGGGCGCGGTCAAGAACAGTGGGGAATTTGGGAGGATCCACGAT GTGCTTGCAGACATGGAGGCACAGGGGGTTCCCCCAAACATTGTGACATTCAACACTCTG ATGTCAATCTATGTCGAACAAGGCAAGATTGATGAGGTCTTCAGGGTGTTTGACACCATC GAGGGCAGTGGCCTGGTGCCCACCGCGGCGACATACTCGACAGTGATGTCGGCCTACAAG AAGGCTGGCGATGCATTCGCGGCACTCAAGTTCATCACCAAGCTAAGGGAGATGTACAAC AAGGGTGAATTGGCGGTGAATCATGAAGATTGGGACCGAGAATTTGTCAAGTTTGAGAAG CTGACTGTCCGTGTCTGCTATATGGCGATGCGGCGGTCTCTTGTGGGTGGTGAGAATCCA GTAGGTGAGGTGCTGAAAGTTCTTCTTGGCATGGATGAAGCTGGGGTGAAGCCAGACAGG AGAGATTACGAGCGGCTTGTGTGGGCATGTACAGGTGAGGAGCATTACACCATTGCCAAG GAGCTGTACCAAAGGATCCGTGAGCGTGGTGATGGCGTGATCAGCTTATCTGTGTGCAAT CATCTGATTTGGCTGATGGGCAAGGCTAAGAAGTGGTGGGCAGCTCTTGAGATTTATGAG GATTTGTTGGACAAAGGCCCCAAACCGAATAACTTGTCGTATGAGCTCATCATGTCACAT TTCAATATTCTACTCAATGCTGCAAAGAGAAGGGGCATTTGGAGGTGGGGTGTAAGGCTG CTTGATAAGATGCAACAGAAGGGCTTGAAGCCTGGAAGCAGAGAGTGGAATGCCGTCCTT CTTGCGTGTTCTAGAGCAGCTGAAACATCTGCTGCAGTGGATATATTTAAGAGAATGATA GATCAAGGGTTGACACCGGATGTAGTTTCTTACGGAGCGCTGCTGAGTGCGCTTGAGAAG GGAAAGCTGTATGATGAGGCACTCCGAGTTTGGGAACACATGTGCAAGGTAGGCGTTAAG CCGAACCTACATGCATATACAATCTTAGTATCAATTTACATTGGCAAGGGGAACCATGCT ATGGTAGATTCTGTTCTTCGTGGTATGCTGTCAGCAAAGATAGAACCAACTGTTGTTACG TTCAATGCGATAATCAGCGCATGCGTGAGAAACAATAAGGGTGGCTCTGCTTTTGAATGG TTCCATAGGATGAAAGTGCAGAACATTGAGCCAAATGAAATTACATATCAGATGTTGATT GAAGCTCTTGTACAAGATGGTAAACCCAGGCTTGCCTATGAGATGTACATGAGGGCTTGC AACCAAGGGCTTGAGCTTCCTGCAAAATCATACGACACTGTAATGGAGGCATGCCAAGAT TATGGTTCCCTCATAGATCTAAATTCTTTGGGTCCTCGGCCTGTTAAGAAAGTGGAACCC ATCAGGATAGAGAACAAGTTTTCGAGTAGTTATTATGTTGGGGATCTTCCCAGCAGCACA AAACATTTTGGTAGCACTGGAACATCTAGTTTATATAGATACAGAACGGAAAGGTGGATC ATGTAGCATTCGGCCCCCTCTTTTTTCTGAACACTTCAAACTCACTCCAAGTCTCCAACA TTGAGAACACACTGATATTTGTTTGTAAGTTGCCTAACTTGTAATTTGTAAACATTCAAT CATTATACAGTAGTGAATTTGTTATTTGCTTTATACGGAGTAGAAAGTAGAAGGAGATTG CC