Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0283100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:10711964:10717815:-1 gene:Os12g0283100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotidyltransferase domain containing protein. (Os12t0283100-01)
Sequence

ATGGCGTACTGCGAAGCCGGTGGCCCCGTCGGGAGATCACCGCCGTCGGGGAGCGGCGGC
GGCGGGAGGAGGAAGACTCTCGCGGAGGTGATGGCCACGAGGACGCCGCGGCCGGCGTCG
ATCCGCCCGGAGGCGACGCGGGCCGCCGAGGCCGCCGCGCGCGAGGTGCTGCTGCGGGTG
GCGCCCACGGAGGAGGCGGAGCGGCGCCGGCAGGACGTCGTCGGCTACCTCAGGCGGCTC
CTCGGCACGGCGCTCGGCTGCGAGGTCATTGCATTTGGGTCAGTTCCACTGAAGAGCTAT
CTCCCAGATGGTGATGTTGATATAACCGTACTTGGGAACACCGCTCTGGACGGCGCTTGC
ATTAGCGATGTTCACAGTATACTCGAGTCAGAGGAGCAGGATAGTGGTGCAGAACTTGAA
ATAAAGGGTTTACATTTCATCGATGCTGAGGTAAAGCTAATTAAATGTGTTATTGAGAAT
ATTGTTGTTGACATCTCGTTCAACCAAATTGGTGGGGTGTCCACACTCTGTTTTCTTGAG
CTGGCTGACCGTAAAGTTGGGAAAAATCATCTGTTCAAGAGGAGCATTATGCTAATCAAG
GCTTGGTGTTATCATGAAAGCCGCATACTGGGAGCTCATCATGGACTATTATCTACTTAT
GCCTTGGAAACACTTGTTCTTTACATATTCAATATATTTCACAAATCTCTGCATGGCCCC
TTGGAGGCCTTGTATAAGTTTTTGGAATATTTTAGCAAGTTTGACTGGGACAAGTATTGC
ATAAGTTTAAATGGTCCTGTTCTTTTGTCATCCTTACCCAGTCCTGCTGTTGAACCTTCA
AGCATACAAGATGAACTACTGTTTGGCAAGAAGACTCTTCCGGAAGTTTCTGATGGATCA
AACATAAATTTTTGCCTGAAGCATCTAAACATAATCGATCCATTGAAGTGGAGTAATAAT
CTTGGTAGAAGCGTCAGCAGAGGAAGCTTTTATCGCATAAGAGGTGCTTTATCGTTTGGT
GCGCAAAAGCTTGGTCAAATTCTCATGTTACATTCTGACCTTATTCCTACTGAGATCTTT
GGATTTTTTGCAAACACCTTGAAGAGACATGGAAGAGGAGAAAGATCAGACGTCGGTAAT
AATGATTCAATCGAATCGTTGCTTGATCCTGAATATGCACTTGGGAAAGATGCACCAGAC
TTCACAAATTCCGACAGGAATCAAGATGAAAACAGGAATCCAAATCTGCAGACAACTTCA
TATAGATATTTTCATGGTGATGCTAAAGATCATCCTTGGAATAAAATCTGGTTAACAAAT
TTTGATATTCAGTATTACAACATGGTTTCAGGAGCTAGTTTAATGAGCCACTCAACATCT
TCCACAGAGAATGGCAACCACAACATTAAACAGCGCTGTAGTAGATCACTTATGGAGCAA
CAGATTTATGCAAGCAACCAACCACATATATTGACTCCATCTACTCATAAAAATACTTTG
GACGTTATCAACTCTTGCAGAGCTGAGTTAAATAGGAGTGACCTCCATGAAGAAAAAGTA
ATACTTTCTCCTTTCTCACCATCAAATTTGTTGGATCTATCAGGGGATCTGGATTTGCAC
TTGAGATGCCTTCAGAAAATTCAGTACCACCTGGAGTCCATGTTTGATGGGTTGGTGCAG
CTGATTCAGGAAGCATTTTTGTCTGGGCTGCTAGATGAGGACTCCTTCAAGATTCCAACC
AGAAGCTTCTCAAATAGTACTGATGAACGGCCTACAGGGCTATTGCCAGTTGCATCTGTT
GATACCGGGACAAGGAACTTATGTCCAGTTTCCTACTTTCCTAGCACAGGAGATGTTTCT
CATAAATCACACACTGAGGATCAAGTCAATGCAGTTTGTCAGAAGAATGTGGTGTTGTCC
TCGGGAACATGTATTATATCCAACGGGTTTGCATCTTCTCCTTCTCCTCCTGCTGATTTA
GAGAGTTATCCTGTTTCTTGGTTTCATAACACACAGGAAATTATGGCTCACGGAACTGGC
ATGCAAACTCTCAAAAATGTGTCATTGCTTCCTGGAACAGATGTACTATCAAATGTAGTC
GGACAACTTCCATTTCTTGCAGCTGATTCAGAGAACTATAGCTTTTCTCGGTCTCATAAC
ACAAGAGAAAAACGTGTGATGCGTGGAACTGGCACATTCCTTCCCAGAATGAGTTATTAT
ACATACAAGGAACGCATATTATCTGAAAAAGGAAGAAGGGAAAGAGAAAGATTACCAGAT
CGACCATGGAAGATTAAAACCAACCCAACTGGCTACCTTCACCAGCACACCTCTCCTGAA
GTGGGATGTTCTGGTGCAAGCACTGGGGGTATTACGATTGACCAAAACAGTTCACAACAG
GATTACTCAAGAAGTTCAGTTCCAGCTGAAGGAGGGGTTTTTCAGAAGAGAGCATTAATA
AATCATGTAAGCGAACAAATTCAGACCAGCCTGCCATGGGATGTTCATAACAATCAACAT
GGGTATGTTTACTCGGACATGAACATGGTTGACAACCAAAATCCTGGTACTACTAGTGAA
GGCCTTGTCGGACATAACAGTGAATCAAGAGAGCTACCGATACACCATCCACCAGAAGTT
CAATTCAGCGAAACAATGGCATCATCACCTTGTATATTGCTGCCTCATTGCATCGGCAAT
GGTCAAGGAAATTTACTCCAAGAATCCAATACTTGTCAGCCCTTCCCACCAGCAACAGAT
GTTTTTCACTCAATCAAAACAAAACAAGATGAAAATCTTGAGGTTGAATCTTTCAGACCT
ATCCCATTTAGTTCCCCCTGTGCAAAGTTCGGAGAAGCATTCCCTCTGCCTACTAGCAAG
GGGCCTGCTGAAACCGAAAGCAGACCAGATGGACTCTACCAGCTGAGAGATGAAGCTGAC
TTCCCTCCACTCCAGACTCGTTCTTGCTGA

Peptide Sequence

PEP ID

Os12t0283100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:10711964:10717815:-1 gene:Os12g0283100 transcript:Os12t0283100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotidyltransferase domain containing protein. (Os12t0283100-01)
Sequence

MAYCEAGGPVGRSPPSGSGGGGRRKTLAEVMATRTPRPASIRPEATRAAEAAAREVLLRV
APTEEAERRRQDVVGYLRRLLGTALGCEVIAFGSVPLKSYLPDGDVDITVLGNTALDGAC
ISDVHSILESEEQDSGAELEIKGLHFIDAEVKLIKCVIENIVVDISFNQIGGVSTLCFLE
LADRKVGKNHLFKRSIMLIKAWCYHESRILGAHHGLLSTYALETLVLYIFNIFHKSLHGP
LEALYKFLEYFSKFDWDKYCISLNGPVLLSSLPSPAVEPSSIQDELLFGKKTLPEVSDGS
NINFCLKHLNIIDPLKWSNNLGRSVSRGSFYRIRGALSFGAQKLGQILMLHSDLIPTEIF
GFFANTLKRHGRGERSDVGNNDSIESLLDPEYALGKDAPDFTNSDRNQDENRNPNLQTTS
YRYFHGDAKDHPWNKIWLTNFDIQYYNMVSGASLMSHSTSSTENGNHNIKQRCSRSLMEQ
QIYASNQPHILTPSTHKNTLDVINSCRAELNRSDLHEEKVILSPFSPSNLLDLSGDLDLH
LRCLQKIQYHLESMFDGLVQLIQEAFLSGLLDEDSFKIPTRSFSNSTDERPTGLLPVASV
DTGTRNLCPVSYFPSTGDVSHKSHTEDQVNAVCQKNVVLSSGTCIISNGFASSPSPPADL
ESYPVSWFHNTQEIMAHGTGMQTLKNVSLLPGTDVLSNVVGQLPFLAADSENYSFSRSHN
TREKRVMRGTGTFLPRMSYYTYKERILSEKGRRERERLPDRPWKIKTNPTGYLHQHTSPE
VGCSGASTGGITIDQNSSQQDYSRSSVPAEGGVFQKRALINHVSEQIQTSLPWDVHNNQH
GYVYSDMNMVDNQNPGTTSEGLVGHNSESRELPIHHPPEVQFSETMASSPCILLPHCIGN
GQGNLLQESNTCQPFPPATDVFHSIKTKQDENLEVESFRPIPFSSPCAKFGEAFPLPTSK
GPAETESRPDGLYQLRDEADFPPLQTRSC

Transcript Sequence

Transcript ID

Os12t0283100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:10711964:10717815:-1 gene:Os12g0283100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotidyltransferase domain containing protein. (Os12t0283100-01)
Sequence

CCTCCACACCACATGGCAGCGTAAGCGAGTAGCTCCCTCCCCCATGGCGTACTGCGAAGC
CGGTGGCCCCGTCGGGAGATCACCGCCGTCGGGGAGCGGCGGCGGCGGGAGGAGGAAGAC
TCTCGCGGAGGTGATGGCCACGAGGACGCCGCGGCCGGCGTCGATCCGCCCGGAGGCGAC
GCGGGCCGCCGAGGCCGCCGCGCGCGAGGTGCTGCTGCGGGTGGCGCCCACGGAGGAGGC
GGAGCGGCGCCGGCAGGACGTCGTCGGCTACCTCAGGCGGCTCCTCGGCACGGCGCTCGG
CTGCGAGGTCATTGCATTTGGGTCAGTTCCACTGAAGAGCTATCTCCCAGATGGTGATGT
TGATATAACCGTACTTGGGAACACCGCTCTGGACGGCGCTTGCATTAGCGATGTTCACAG
TATACTCGAGTCAGAGGAGCAGGATAGTGGTGCAGAACTTGAAATAAAGGGTTTACATTT
CATCGATGCTGAGGTAAAGCTAATTAAATGTGTTATTGAGAATATTGTTGTTGACATCTC
GTTCAACCAAATTGGTGGGGTGTCCACACTCTGTTTTCTTGAGCTGGCTGACCGTAAAGT
TGGGAAAAATCATCTGTTCAAGAGGAGCATTATGCTAATCAAGGCTTGGTGTTATCATGA
AAGCCGCATACTGGGAGCTCATCATGGACTATTATCTACTTATGCCTTGGAAACACTTGT
TCTTTACATATTCAATATATTTCACAAATCTCTGCATGGCCCCTTGGAGGCCTTGTATAA
GTTTTTGGAATATTTTAGCAAGTTTGACTGGGACAAGTATTGCATAAGTTTAAATGGTCC
TGTTCTTTTGTCATCCTTACCCAGTCCTGCTGTTGAACCTTCAAGCATACAAGATGAACT
ACTGTTTGGCAAGAAGACTCTTCCGGAAGTTTCTGATGGATCAAACATAAATTTTTGCCT
GAAGCATCTAAACATAATCGATCCATTGAAGTGGAGTAATAATCTTGGTAGAAGCGTCAG
CAGAGGAAGCTTTTATCGCATAAGAGGTGCTTTATCGTTTGGTGCGCAAAAGCTTGGTCA
AATTCTCATGTTACATTCTGACCTTATTCCTACTGAGATCTTTGGATTTTTTGCAAACAC
CTTGAAGAGACATGGAAGAGGAGAAAGATCAGACGTCGGTAATAATGATTCAATCGAATC
GTTGCTTGATCCTGAATATGCACTTGGGAAAGATGCACCAGACTTCACAAATTCCGACAG
GAATCAAGATGAAAACAGGAATCCAAATCTGCAGACAACTTCATATAGATATTTTCATGG
TGATGCTAAAGATCATCCTTGGAATAAAATCTGGTTAACAAATTTTGATATTCAGTATTA
CAACATGGTTTCAGGAGCTAGTTTAATGAGCCACTCAACATCTTCCACAGAGAATGGCAA
CCACAACATTAAACAGCGCTGTAGTAGATCACTTATGGAGCAACAGATTTATGCAAGCAA
CCAACCACATATATTGACTCCATCTACTCATAAAAATACTTTGGACGTTATCAACTCTTG
CAGAGCTGAGTTAAATAGGAGTGACCTCCATGAAGAAAAAGTAATACTTTCTCCTTTCTC
ACCATCAAATTTGTTGGATCTATCAGGGGATCTGGATTTGCACTTGAGATGCCTTCAGAA
AATTCAGTACCACCTGGAGTCCATGTTTGATGGGTTGGTGCAGCTGATTCAGGAAGCATT
TTTGTCTGGGCTGCTAGATGAGGACTCCTTCAAGATTCCAACCAGAAGCTTCTCAAATAG
TACTGATGAACGGCCTACAGGGCTATTGCCAGTTGCATCTGTTGATACCGGGACAAGGAA
CTTATGTCCAGTTTCCTACTTTCCTAGCACAGGAGATGTTTCTCATAAATCACACACTGA
GGATCAAGTCAATGCAGTTTGTCAGAAGAATGTGGTGTTGTCCTCGGGAACATGTATTAT
ATCCAACGGGTTTGCATCTTCTCCTTCTCCTCCTGCTGATTTAGAGAGTTATCCTGTTTC
TTGGTTTCATAACACACAGGAAATTATGGCTCACGGAACTGGCATGCAAACTCTCAAAAA
TGTGTCATTGCTTCCTGGAACAGATGTACTATCAAATGTAGTCGGACAACTTCCATTTCT
TGCAGCTGATTCAGAGAACTATAGCTTTTCTCGGTCTCATAACACAAGAGAAAAACGTGT
GATGCGTGGAACTGGCACATTCCTTCCCAGAATGAGTTATTATACATACAAGGAACGCAT
ATTATCTGAAAAAGGAAGAAGGGAAAGAGAAAGATTACCAGATCGACCATGGAAGATTAA
AACCAACCCAACTGGCTACCTTCACCAGCACACCTCTCCTGAAGTGGGATGTTCTGGTGC
AAGCACTGGGGGTATTACGATTGACCAAAACAGTTCACAACAGGATTACTCAAGAAGTTC
AGTTCCAGCTGAAGGAGGGGTTTTTCAGAAGAGAGCATTAATAAATCATGTAAGCGAACA
AATTCAGACCAGCCTGCCATGGGATGTTCATAACAATCAACATGGGTATGTTTACTCGGA
CATGAACATGGTTGACAACCAAAATCCTGGTACTACTAGTGAAGGCCTTGTCGGACATAA
CAGTGAATCAAGAGAGCTACCGATACACCATCCACCAGAAGTTCAATTCAGCGAAACAAT
GGCATCATCACCTTGTATATTGCTGCCTCATTGCATCGGCAATGGTCAAGGAAATTTACT
CCAAGAATCCAATACTTGTCAGCCCTTCCCACCAGCAACAGATGTTTTTCACTCAATCAA
AACAAAACAAGATGAAAATCTTGAGGTTGAATCTTTCAGACCTATCCCATTTAGTTCCCC
CTGTGCAAAGTTCGGAGAAGCATTCCCTCTGCCTACTAGCAAGGGGCCTGCTGAAACCGA
AAGCAGACCAGATGGACTCTACCAGCTGAGAGATGAAGCTGACTTCCCTCCACTCCAGAC
TCGTTCTTGCTGAGACTTGCAATGGATTTAATCCTAGAGTTGGAAGATAGAGGAAGCTTA
CTGGCTGAGAAATAGGTGCTTCAGGAGGAACCTGATATCATATGAAGTTTGGATGTTACC
GCCCTCAGTTTGGAGTACTTCTTTAGGTGTGTTCACTCCCGGTAGAATCTTTAGTAAAAA
AGAACTAGTTCACCTGCAGCTTATATAACCCAAAAAAAGGAAAGAAAAACAAAAATGCTA
AATAAAAAGAGGATTCCATGGACCCTATCAAATTTTAATAGAAGACAAAAGAAGCAGTGT
ATAGGTGCAACACCCTTTTGCTGTGCTTTATGTTGATGCACCCTTTGCAGTTTGCATGGT
GAATTTGTTTAAAGTAAAGTTTTTTCCTGT