Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0279100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:10468382:10478397:-1 gene:Os12g0279100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 702 description:Transcription factor jumonji domain containing protein. (Os12t0279100-01)
Sequence	ATGTCGCTGCAGCCGCCGGCGGTGGAGCCGCCGGAGTGGCTGCGGACGCTGCCCGTGGCG CCGGAGTACCACCCGACGCTGGCGGAGTTCGCCGACCCCATCGCCTACATCCTCAGGATC GAGCCGGAGGCGTCCCGCTACGGCATCTGCAAGATCGTGCCCCCGCTCCCGCGGCCCCCC GAGGACGACACCTTCCGCCGCCTCCAGGCCGCCTTCGCCGCCGCGGCCTCCTCCAATGGC GACCCCTCCCCGACCTTCCCCACGCGGCTCCAGCAGGTCGGCCTCTCCGCCAGGAACCGC CGCGCCGCCAGCCGCCGGGTGTGGGAGAGCGGGGAGCGCTACACCCTGGAGGCGTTCCGC GCCAAGGCGGCCGAGTTCGAGCCCCCGAGGCACGCCGCGCCGCCCAGGAACCCCACCCAC CTCCAGCTCGAGGCCCTCTTCTGGGCCGCCTGCGCCTCCAGGCCCTTCAGCGTCGAGTAC GGCAACGACATGCCCGGCTCCGGCTTCGCCTCCCCCGACGAGCTCCCCGACGCCGCCAAT GCCACCGACGTCGGGGAGACGGAGTGGAACATGCGGGTGGCGCCCCGCGCCCGGGGGTCG CTGCTCCGCGCCATGGCCCGCGACGTGGCGGGCGTCACCACCCCGATGCTGTACGTGGCC ATGCTCTACAGCTGGTTCGCCTGGCACGTGGAGGACCACGAGCTCCACAGCCTCAACTTC CTCCACTTCGGCAAGGCCAAGACCTGGTACGGCGTCCCCCGCGACGCCATGCTCGCCTTC GAGGAGACGGTGCGCGTCCACGGCTACGCCGACGACCTCAACGCCATCATGGCCTTTCAA ACGTTAAATGAGAAGACAACTGTCTTATCTCCTGAGGTGCTTCTTTCTGCTGGTGTTCCC TGCTGCAGATTGGTTCAAAAAGCGGGAGAATTTGTTATCACATTCCCTGGAGCTTATCAT TCAGGCTTTAGCCATGGATTTAATTGTGGGGAAGCATCAAATATTGCAACTCCCCATTGG TTACAAGTGGCTAAAGAAGCTGCAATCCGGAGGGCTTCAACTAATTGTGGTCCGATGGTG TCTCATTATCAGCTGCTTTATGAGCTAGCACTCTCATTGCGTCCAAGGGAGCCTAAGAAT TTCTATTCTGTTCCAAGAAGCTCACGTTTAAGGGACAAGAATAAGAATGAAGGTGATATA ATGGTCAAAGAAAATTTTGTTGGAAGTGTAACCGAAAACAACAATTTGCTTAGCGCCCTT CTGGATAAGAATTCTTGTATAATTGTTCCAAACGCTGATTTCTTCGTTCCATCCTTTCCT GTTGCACTGGAATCTGAAGTTACTGTTAAACAAAGGTTTACAGCTGGTCCCTGCAGTATT AGCCAGCAAGGAGCAGAAAATATGGCTGCTGATCATGTGGCTGTAGACAAGGTTACAGAG ATTCAGGACATGAGTGGATCCTTATATCCTTGTGAAACCAGTCTTGTGGGCTGTAGCAAT AGAAAACTTTATGAAACAAAATATGGCCAACGGGATGCTGCTGCTTTGTGCTTATCTACT TCAGAGATTCAGAGCAGAGGAATTGATACAGCAAGATCACATCCAGCAGGCGGGATCTTA GATCAAGGACGGTTGCCATGTGTACAGTGCGGAATACTAAGCTTTGCATGTGTAGCCATC ATTCAACCTAGAGAAGCAGCAGTACAGTTTATCATGTCTAAAGAGTGCATCTCATCGAGT GCAAAACAAGGAGGAATTGGTGCATCTGATGATACCTCAAACTGGATTGACCAGAGTCAT GAGATTAGTCCTCCACCAGGTCCAGCATCTGGAACAGATGATAATGTAAAGCATGCCGTA AGTTTGGCCCATGTCTCTGATCGGTGTAGAGAACTATATGCCAGCAATACAGATGGATGC ACCTCTGCTCTTGGGCTTCTAGCTTCTGCATATGACTCATCAGACTCTGATGATGAAACA ACTGAGGATGTTTCAAAACATAGCAAGAAAAATGATTCAGTAAACCAAAGCACGGATCCT CAAATCTTGGAAACATCAGCTAGCTGTTCCAGTACAGTTCAGTGTCAAAAGACAAATTCA CACTTGCATGAAGAGGAATGTGAGGCAAGAGCCACATCATTGATGAAACCTGTAAGCCAT AATAGTAGGCCCATTAGTCAGTCTAACAGGGATACAGATATCGACCATTTTATAGAACTG GGAAAGTCAGGAACACAGTGTTCAGGTTATCTTGATTTGGTTGATGATCTAACTACATCA GTTTTAAAATCCTCTTCAGATACTTGTGTAAGTGCAGCTAAAGCCTCAATGGATCCAGAT GTTTTGACCATGCTCAGGTACAATAAAGACTCTTGCAGAATGCATGTGTTTTGTCTTGAA CATGCTTTGGAAACATGGACACAGCTTCAACAAATCGGTGGTGCTAATATTATGCTTTTG TGCCATCCAGAATACCCTAGAGCAGAGTCAGCAGCAAAAGTCATAGCAGAAGAACTTGGT ATCAAGCATGATTGGAAAGATATCACTTTCAAAGAAGCAACTGAAGAGGACGTTAAAAAG ATTCAGTTGGCTTTACAGGATGAAGATGCTGAACCCACTGGCAGTGACTGGGCAGTCAAA ATGGGTATCAACATATATTACAGTGCCAAACAGAGCAAATCACCACTTTACAGCAAGCAG ATACCATACAATTCCATCATTTATAAGGCATTTGGCCAAGAAAACCCAGACAGTTTGACA GATTATGGATGTCAAAAGTCAGGCTCAACAAAGAAAAAGGTGGCTGGGTGGTGGTGTGGG AAAGTTTGGATGTCAAATCAAGTTCATCCACTTCTAGCTCGTGAGCGTGAAGAACAGAAC AGTAGCGTAGTGTACGGCAAAGCAATGTTCACTACTATTTCCCATGGCAAAGTACAAGAT GAAGCGTCAACAAGATGCAATACAAGCAACCGAACCCCATCAAGAAGAACATCAAGAAGA AAAAAGGGGGTATCTGCTGAGAAATCTAAACCAAAAAACAAGAGATCCACTGCTTCTGAT GAAGCTAGTATGCTTTGCAGTGGCCTTGGAATGAACTCTGGAGTTATCCATGACCAAACT GAAAACTCTGATGATTATGACAAACATGGCAATGGAGATGAAATTGAGGAAGGAACAAAT CCTCAGAAATATCAACAACGTAAATTGCAAAACGTGACCAGGAAATCAAGTTCTAAGAAG CGGAAGGATGAGAAAAGAACAGATAGTTTTCATGAACTATATGACGAGGATAATGGTGTG GATTATTGGCTTAACATGGGTAGTGGAGATGATGCCACACTAGGTAACTCTCGACAACAA AGTCCTGATCCAGTGAAAGTGAAATCTGGAGGCAAATTGCAAGGTAAGAGAAAATCTAGC AAGTACAAGTCCAATGATGATTTGTTGAATGAAGAAAATAAGTTACAAAAGATGAACAAA AAATCAAGCTCTAAGAAGCAAAAGAATGATAAGATAAATAGACAACTTCAAGAAGATCAA ACCGAAGATGACCATATGGACCACTTAGTTGACGTAGCGGTTGCAGATGAAGTCACACTA GACAATGAGGATAAAATTACAGAAGACAAAATTGATGACGTGAAAGTGAAATCTAGAGGA AAATCGCAAAATGGTAAGAGAAAAGGCAGCAAACATCAGGCTACCGATGGTTTGCGCGCT GGAAATAAAGTGGCCAAATTTCCGTGTGATATAGAAGGATGTGACATGAGCTTCAGTACC CAGCAGGACTTGTTATTGCATAAGCGTGACATTTGTCCTGTCAAAGGATGCAAGAAGAAG TTCTTCTGCCACAAGTACTTGCTTCAGCACCGGAAGGTGCATATAGATGAAAGGCCACTT AAGTGTACATGGAAGGGGTGTAAGAAGGCATTCAAGTGGCCATGGGCGAGGACGGAGCAC ATGAGAGTCCATACGGGGGTAAGACCTTACGAGTGCCAGGAACCTGGCTGTGGTCAGACA TTCCGATTCGTTTCAGATTTCAGCCGCCACAAGAGAAAGACTGGCCATTCCTCTGATAAG AGAAGAAAGAACAGTACATAA

Peptide Sequence

PEP ID	Os12t0279100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:10468382:10478397:-1 gene:Os12g0279100 transcript:Os12t0279100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 702 description:Transcription factor jumonji domain containing protein. (Os12t0279100-01)
Sequence	MSLQPPAVEPPEWLRTLPVAPEYHPTLAEFADPIAYILRIEPEASRYGICKIVPPLPRPP EDDTFRRLQAAFAAAASSNGDPSPTFPTRLQQVGLSARNRRAASRRVWESGERYTLEAFR AKAAEFEPPRHAAPPRNPTHLQLEALFWAACASRPFSVEYGNDMPGSGFASPDELPDAAN ATDVGETEWNMRVAPRARGSLLRAMARDVAGVTTPMLYVAMLYSWFAWHVEDHELHSLNF LHFGKAKTWYGVPRDAMLAFEETVRVHGYADDLNAIMAFQTLNEKTTVLSPEVLLSAGVP CCRLVQKAGEFVITFPGAYHSGFSHGFNCGEASNIATPHWLQVAKEAAIRRASTNCGPMV SHYQLLYELALSLRPREPKNFYSVPRSSRLRDKNKNEGDIMVKENFVGSVTENNNLLSAL LDKNSCIIVPNADFFVPSFPVALESEVTVKQRFTAGPCSISQQGAENMAADHVAVDKVTE IQDMSGSLYPCETSLVGCSNRKLYETKYGQRDAAALCLSTSEIQSRGIDTARSHPAGGIL DQGRLPCVQCGILSFACVAIIQPREAAVQFIMSKECISSSAKQGGIGASDDTSNWIDQSH EISPPPGPASGTDDNVKHAVSLAHVSDRCRELYASNTDGCTSALGLLASAYDSSDSDDET TEDVSKHSKKNDSVNQSTDPQILETSASCSSTVQCQKTNSHLHEEECEARATSLMKPVSH NSRPISQSNRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKASMDPD VLTMLRYNKDSCRMHVFCLEHALETWTQLQQIGGANIMLLCHPEYPRAESAAKVIAEELG IKHDWKDITFKEATEEDVKKIQLALQDEDAEPTGSDWAVKMGINIYYSAKQSKSPLYSKQ IPYNSIIYKAFGQENPDSLTDYGCQKSGSTKKKVAGWWCGKVWMSNQVHPLLAREREEQN SSVVYGKAMFTTISHGKVQDEASTRCNTSNRTPSRRTSRRKKGVSAEKSKPKNKRSTASD EASMLCSGLGMNSGVIHDQTENSDDYDKHGNGDEIEEGTNPQKYQQRKLQNVTRKSSSKK RKDEKRTDSFHELYDEDNGVDYWLNMGSGDDATLGNSRQQSPDPVKVKSGGKLQGKRKSS KYKSNDDLLNEENKLQKMNKKSSSKKQKNDKINRQLQEDQTEDDHMDHLVDVAVADEVTL DNEDKITEDKIDDVKVKSRGKSQNGKRKGSKHQATDGLRAGNKVAKFPCDIEGCDMSFST QQDLLLHKRDICPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEH MRVHTGVRPYECQEPGCGQTFRFVSDFSRHKRKTGHSSDKRRKNST

Transcript Sequence

Transcript ID	Os12t0279100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10468382:10478397:-1 gene:Os12g0279100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 702 description:Transcription factor jumonji domain containing protein. (Os12t0279100-01)
Sequence	ACTACCCCCAAAGCAGCAGCAAGCGGCATCAGCAGCGAGCACCCAAGCTAAGCCAGCAGC AGCAGCAGCAGCAGCCAAGCCAATTCCCCCAAATCGCCTCCTCCCAAATGCGACTCCTCC TCCTCCCCTGACGAAACCCTCCCCCTCCGCCTCCGCCTCCGCCATGTCGCTGCAGCCGCC GGCGGTGGAGCCGCCGGAGTGGCTGCGGACGCTGCCCGTGGCGCCGGAGTACCACCCGAC GCTGGCGGAGTTCGCCGACCCCATCGCCTACATCCTCAGGATCGAGCCGGAGGCGTCCCG CTACGGCATCTGCAAGATCGTGCCCCCGCTCCCGCGGCCCCCCGAGGACGACACCTTCCG CCGCCTCCAGGCCGCCTTCGCCGCCGCGGCCTCCTCCAATGGCGACCCCTCCCCGACCTT CCCCACGCGGCTCCAGCAGGTCGGCCTCTCCGCCAGGAACCGCCGCGCCGCCAGCCGCCG GGTGTGGGAGAGCGGGGAGCGCTACACCCTGGAGGCGTTCCGCGCCAAGGCGGCCGAGTT CGAGCCCCCGAGGCACGCCGCGCCGCCCAGGAACCCCACCCACCTCCAGCTCGAGGCCCT CTTCTGGGCCGCCTGCGCCTCCAGGCCCTTCAGCGTCGAGTACGGCAACGACATGCCCGG CTCCGGCTTCGCCTCCCCCGACGAGCTCCCCGACGCCGCCAATGCCACCGACGTCGGGGA GACGGAGTGGAACATGCGGGTGGCGCCCCGCGCCCGGGGGTCGCTGCTCCGCGCCATGGC CCGCGACGTGGCGGGCGTCACCACCCCGATGCTGTACGTGGCCATGCTCTACAGCTGGTT CGCCTGGCACGTGGAGGACCACGAGCTCCACAGCCTCAACTTCCTCCACTTCGGCAAGGC CAAGACCTGGTACGGCGTCCCCCGCGACGCCATGCTCGCCTTCGAGGAGACGGTGCGCGT CCACGGCTACGCCGACGACCTCAACGCCATCATGGCCTTTCAAACGTTAAATGAGAAGAC AACTGTCTTATCTCCTGAGGTGCTTCTTTCTGCTGGTGTTCCCTGCTGCAGATTGGTTCA AAAAGCGGGAGAATTTGTTATCACATTCCCTGGAGCTTATCATTCAGGCTTTAGCCATGG ATTTAATTGTGGGGAAGCATCAAATATTGCAACTCCCCATTGGTTACAAGTGGCTAAAGA AGCTGCAATCCGGAGGGCTTCAACTAATTGTGGTCCGATGGTGTCTCATTATCAGCTGCT TTATGAGCTAGCACTCTCATTGCGTCCAAGGGAGCCTAAGAATTTCTATTCTGTTCCAAG AAGCTCACGTTTAAGGGACAAGAATAAGAATGAAGGTGATATAATGGTCAAAGAAAATTT TGTTGGAAGTGTAACCGAAAACAACAATTTGCTTAGCGCCCTTCTGGATAAGAATTCTTG TATAATTGTTCCAAACGCTGATTTCTTCGTTCCATCCTTTCCTGTTGCACTGGAATCTGA AGTTACTGTTAAACAAAGGTTTACAGCTGGTCCCTGCAGTATTAGCCAGCAAGGAGCAGA AAATATGGCTGCTGATCATGTGGCTGTAGACAAGGTTACAGAGATTCAGGACATGAGTGG ATCCTTATATCCTTGTGAAACCAGTCTTGTGGGCTGTAGCAATAGAAAACTTTATGAAAC AAAATATGGCCAACGGGATGCTGCTGCTTTGTGCTTATCTACTTCAGAGATTCAGAGCAG AGGAATTGATACAGCAAGATCACATCCAGCAGGCGGGATCTTAGATCAAGGACGGTTGCC ATGTGTACAGTGCGGAATACTAAGCTTTGCATGTGTAGCCATCATTCAACCTAGAGAAGC AGCAGTACAGTTTATCATGTCTAAAGAGTGCATCTCATCGAGTGCAAAACAAGGAGGAAT TGGTGCATCTGATGATACCTCAAACTGGATTGACCAGAGTCATGAGATTAGTCCTCCACC AGGTCCAGCATCTGGAACAGATGATAATGTAAAGCATGCCGTAAGTTTGGCCCATGTCTC TGATCGGTGTAGAGAACTATATGCCAGCAATACAGATGGATGCACCTCTGCTCTTGGGCT TCTAGCTTCTGCATATGACTCATCAGACTCTGATGATGAAACAACTGAGGATGTTTCAAA ACATAGCAAGAAAAATGATTCAGTAAACCAAAGCACGGATCCTCAAATCTTGGAAACATC AGCTAGCTGTTCCAGTACAGTTCAGTGTCAAAAGACAAATTCACACTTGCATGAAGAGGA ATGTGAGGCAAGAGCCACATCATTGATGAAACCTGTAAGCCATAATAGTAGGCCCATTAG TCAGTCTAACAGGGATACAGATATCGACCATTTTATAGAACTGGGAAAGTCAGGAACACA GTGTTCAGGTTATCTTGATTTGGTTGATGATCTAACTACATCAGTTTTAAAATCCTCTTC AGATACTTGTGTAAGTGCAGCTAAAGCCTCAATGGATCCAGATGTTTTGACCATGCTCAG GTACAATAAAGACTCTTGCAGAATGCATGTGTTTTGTCTTGAACATGCTTTGGAAACATG GACACAGCTTCAACAAATCGGTGGTGCTAATATTATGCTTTTGTGCCATCCAGAATACCC TAGAGCAGAGTCAGCAGCAAAAGTCATAGCAGAAGAACTTGGTATCAAGCATGATTGGAA AGATATCACTTTCAAAGAAGCAACTGAAGAGGACGTTAAAAAGATTCAGTTGGCTTTACA GGATGAAGATGCTGAACCCACTGGCAGTGACTGGGCAGTCAAAATGGGTATCAACATATA TTACAGTGCCAAACAGAGCAAATCACCACTTTACAGCAAGCAGATACCATACAATTCCAT CATTTATAAGGCATTTGGCCAAGAAAACCCAGACAGTTTGACAGATTATGGATGTCAAAA GTCAGGCTCAACAAAGAAAAAGGTGGCTGGGTGGTGGTGTGGGAAAGTTTGGATGTCAAA TCAAGTTCATCCACTTCTAGCTCGTGAGCGTGAAGAACAGAACAGTAGCGTAGTGTACGG CAAAGCAATGTTCACTACTATTTCCCATGGCAAAGTACAAGATGAAGCGTCAACAAGATG CAATACAAGCAACCGAACCCCATCAAGAAGAACATCAAGAAGAAAAAAGGGGGTATCTGC TGAGAAATCTAAACCAAAAAACAAGAGATCCACTGCTTCTGATGAAGCTAGTATGCTTTG CAGTGGCCTTGGAATGAACTCTGGAGTTATCCATGACCAAACTGAAAACTCTGATGATTA TGACAAACATGGCAATGGAGATGAAATTGAGGAAGGAACAAATCCTCAGAAATATCAACA ACGTAAATTGCAAAACGTGACCAGGAAATCAAGTTCTAAGAAGCGGAAGGATGAGAAAAG AACAGATAGTTTTCATGAACTATATGACGAGGATAATGGTGTGGATTATTGGCTTAACAT GGGTAGTGGAGATGATGCCACACTAGGTAACTCTCGACAACAAAGTCCTGATCCAGTGAA AGTGAAATCTGGAGGCAAATTGCAAGGTAAGAGAAAATCTAGCAAGTACAAGTCCAATGA TGATTTGTTGAATGAAGAAAATAAGTTACAAAAGATGAACAAAAAATCAAGCTCTAAGAA GCAAAAGAATGATAAGATAAATAGACAACTTCAAGAAGATCAAACCGAAGATGACCATAT GGACCACTTAGTTGACGTAGCGGTTGCAGATGAAGTCACACTAGACAATGAGGATAAAAT TACAGAAGACAAAATTGATGACGTGAAAGTGAAATCTAGAGGAAAATCGCAAAATGGTAA GAGAAAAGGCAGCAAACATCAGGCTACCGATGGTTTGCGCGCTGGAAATAAAGTGGCCAA ATTTCCGTGTGATATAGAAGGATGTGACATGAGCTTCAGTACCCAGCAGGACTTGTTATT GCATAAGCGTGACATTTGTCCTGTCAAAGGATGCAAGAAGAAGTTCTTCTGCCACAAGTA CTTGCTTCAGCACCGGAAGGTGCATATAGATGAAAGGCCACTTAAGTGTACATGGAAGGG GTGTAAGAAGGCATTCAAGTGGCCATGGGCGAGGACGGAGCACATGAGAGTCCATACGGG GGTAAGACCTTACGAGTGCCAGGAACCTGGCTGTGGTCAGACATTCCGATTCGTTTCAGA TTTCAGCCGCCACAAGAGAAAGACTGGCCATTCCTCTGATAAGAGAAGAAAGAACAGTAC ATAACTTCTAACCGCTGTGCGCAAAGTACAGGTTTCTTCTCTGACGATGATCTGAAGAGG GATGCTAATTGAATAATTGCATCAGATTCCATTTATTGTGGGATTAGCCCACATTAGGAG TCTAATTCATTTCATTGTTTGCCGGCTCTGCATAACAGCCAATTTTTCAATTGCTTTAGG TCCAACTGACCTTTTGTTGACTAGGATTTACTCCCAAGTCAATTGTATCAACCGGTCTTC TGTTC