Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0278800-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:10436138:10443948:-1 gene:Os12g0278800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 65 description:Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 6. (Os12t0278800-02);Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-03)
Sequence	ATGGCGGACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGT TCGATCTCCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTG GAGGTGGAGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTT CCCAAGCCCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGT GGTGAGAAGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGAT TCGAGGCCGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTC GGGAGCTGCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGT AGGGTGAAAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAA GCCTCCTCGCCTGATGATGAGCAGCAGGCTCCAAAAGAGGAATACGGAAGCTATGTTCCA GATATTTCACCTGAAGTTGATTCTTTGGGATTTGCTGACAAGGGGAGTGCGTCTAACTTA GAAAACTTTAAGAAATATTCTTATGAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCA AAGGAACTTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAG GAGGAATGCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATAC CTCCACCGTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTC GGTCTTCCACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGC AAGTACGCCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGAT CCACAGTTGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCT CAGCCAAATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTT ATAGCTCCATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCT CCTGAATGGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCT TTCCAACATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCT GGACATCAGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAG CATTTTGTGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGG TCACCGGTGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGATCAG CCTGTGTGCACATACTATGGTCGCTATGGGGTCTGCAAATTTGGGCCAGCTTGCGCATAC AATCACCCCTTCAATTTTAGCCCTGTACCTGCAGCGGGACCTCCTCTCCTCCCTGCTCAA TACCCAACTCCAGGAAACTACACTCTCTGA

Peptide Sequence

PEP ID	Os12t0278800-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:10436138:10443948:-1 gene:Os12g0278800 transcript:Os12t0278800-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 65 description:Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 6. (Os12t0278800-02);Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-03)
Sequence	MADADARAPPKSDPGATPIGSISPSSAAPAAGEDEVEVEVEVEEQLAGLAIADQGEELLL PKPTGWEDGPVVVAGDEVSGGEKLPGEVAAAVGVEGAAADSRPRFPRRPGEPDCTYYVKF GSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSPDDEQQAPKEEYGSYVP DISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELKVAKEKRKEFISEGSSQ EECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSC KYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPF IAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIP GHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQ PVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAGPPLLPAQYPTPGNYTL

Transcript Sequence

Transcript ID	Os12t0278800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10436138:10443948:-1 gene:Os12g0278800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 65 description:Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-01);Similar to zinc finger CCCH type domain-containing protein ZFN-like 6. (Os12t0278800-02);Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3. (Os12t0278800-03)
Sequence	ATCCCTTCTCTCTCCTCTCTCTCTCTCCAGTCTCCACCTCCGAGGAGAGGCCAATGGCGG ACGCCGACGCGAGGGCCCCGCCCAAATCGGACCCCGGCGCCACGCCGATCGGTTCGATCT CCCCTTCCTCCGCCGCCCCCGCCGCCGGGGAGGACGAGGTGGAGGTCGAGGTGGAGGTGG AGGAGCAGCTCGCCGGACTCGCCATCGCCGATCAGGGGGAGGAGCTGCTGCTTCCCAAGC CCACCGGCTGGGAGGATGGCCCTGTTGTTGTTGCTGGAGATGAGGTCTCCGGTGGTGAGA AGCTGCCGGGTGAGGTGGCGGCGGCGGTGGGGGTGGAGGGTGCTGCGGCGGATTCGAGGC CGCGGTTCCCGAGGCGACCCGGGGAGCCGGACTGCACCTACTACGTCAAGTTCGGGAGCT GCCGCTTTGGGATGAAGTGCAAGTTCAATCATCCGGCGAGGAAGAAGAAGAGTAGGGTGA AAGGTAGTAACGGTGGTAGTGGCAGCGGCGGGAGCAACAGCAGCAGTAACAAAGCCTCCT CGCCTGATGATGAGCAGCAGGCTCCAAAAGAGGAATACGGAAGCTATGTTCCAGATATTT CACCTGAAGTTGATTCTTTGGGATTTGCTGACAAGGGGAGTGCGTCTAACTTAGAAAACT TTAAGAAATATTCTTATGAGATTATCGATGTGAAGAAGGGAAGAGTGGAGCCAAAGGAAC TTAAGGTTGCCAAAGAGAAAAGGAAGGAATTTATTTCAGAAGGTAGTTCCCAGGAGGAAT GCAAGTATTATTCAACACCTGGAGGATGCAAATTTGGTAAAGCTTGTAAATACCTCCACC GTGATGGAAAAGAAGGGAAAACAGACGCTGAAAAGGTTGACCTGAACTTTCTCGGTCTTC CACTTCGTCCAGGGGAAAAGGAGTGTCCCTACTACATGCGTACTGGGAGCTGCAAGTACG CCACTAACTGCAAGTTTCACCATCCTGATCCTTCTAATGTTGCTTCTAAAGATCCACAGT TGGAGCATGAGAATGGGGATGCTCCACAGCAAGATGTTCAAGGATCATCGTCTCAGCCAA ATGCTTCAATTTGGCCCGATCAGAGAACAGTGAATGAGCATCATGTTCCGTTTATAGCTC CATCTCCATCGTACAGTGCAGGGATGCTTCCTCCTCAAGGAATGTATCCACCTCCTGAAT GGAATGGGTATCATCAGGTTCCGTTGAATCCATATTATCCTCCTGGAGTCCCTTTCCAAC ATTTTCCAGCTGCTCCTATAAATCATCCTATGTACAAGGCACCAGAAATACCTGGACATC AGCAGGTTCCTTCCGAGGAATACCCAGAGAGACCTGGCCAACCTGAATGTCAGCATTTTG TGAAGAGTGGTTTTTGCAAATTTAGGATGAAGTGCAAATATCACCACCCAAGGTCACCGG TGCCTCCAGCAGGAGCTCTTAGCCCTCTTGGCTTGCCTATAAAACCTGATCAGCCTGTGT GCACATACTATGGTCGCTATGGGGTCTGCAAATTTGGGCCAGCTTGCGCATACAATCACC CCTTCAATTTTAGCCCTGTACCTGCAGCGGGACCTCCTCTCCTCCCTGCTCAATACCCAA CTCCAGGAAACTACACTCTCTGAAGCAGGCACGAGCGATTTTTCATCGTCGCCGTGATGC TTGTAATAACTTCACTTGTAAGATAGCGTAGCTGAAAGCTGTACGTGGGTTCACTCACTG ACAGTGGGAGAGATCTGGCTTGGAAAGTGGCAACGAAGTTGCATCAAGCTGGGTACATTG CCGCTGGAATTCATGAAATTAAACAAAACCTGTCAAAACTCTTTACATTGTACAGCATCG TCGCGTTTAGTATACAACTATGGCGTCGGGCTG