Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0273900-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:10058775:10061686:-1 gene:Os12g0273900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os12t0273900-00)
Sequence	ATGATCCGAAGTGTCATTCATGAGCAAATATATATTTTTGCATATTACATTTGCATCCAT TCATTCACACAGAAAAAGAAGAAAAACAGAATGGCTGAGCCCAGGTTTCCTCCTCCTGAA ACTCTGAAGATAGCATTGCTGTGCCTTCTCCTCCCCTTGTTCTCACCAGCCACAGCATCC ATCCCTTCTGCTGCATCGACGTCGTCGGACCGGAGCTGCATCGCCGATGAGAGGGCCGCA CTTCTCGCCATAAAGGCAACCTTCTTCGACCCGAACAGCCGCCTCGCATCATGGCAGGGC GAGGATTGTTGCAGCTGGTGGGGTGTCAGGTGCAGCAACAGAACCGGCCATGTCATCAAG CTGAGACTCCGTGGGAACACAGACGACTGTCTCAGCTTCTATGGAGACAAACTCAGAGGT GAGATGAGCTACTCTTTGGTCAGTTTGCAGAAATTGAGGTATCTAGACTTGAGTTGCAAC AACTTCAATTGGTCACAGATACCGGTATTTCTTGGTTCTCTTCCAAGCCTTAGATATCTC AACCTTTCATATGGTTTCTTCTATGGAAGTGTACCCCCCCAGCTTGGCAACCTCTCCAAA CTTGCCTACCTTGATCTGACCTCTTATTCATACAACCAGCTATACTCGGTTGCCCTTTCA TGGCTGTCACACCTATCCTCACTGAAGCATCTGGTCATGAACCATGTGAACCTTACCACT GCAGTAGATTGGGTTGATGAAATCAACATGCTTCCTGCTCTGAAAGTACTCTACCTGAAA CAGTGTGGGCTGAGGAAAACAGTTCCTTTCCTTCGTCGGTCCAATATCACGGGGCTCGAA GTGCTTGACATCTCGGGAAATAGATTTCACACCAAGATTGCTCCTAACTGGTTTTGGAAT ATAACTAGTCTCTCTGCTCTTGATATCCGATCGTGTGGTTTCTTTGGCTCAATTCCAGAC GAAATAGGCAGGATGGCCTCTCTTGAAGAAGTCTATTTCCAAGGGAACAATCTCATGTCA ACCATGATACCCTCAAGTTTCAAAAATCTATGCAACCTGAAGGTGCTGGATCTACGAAGT ACCAATACTACAGGGGATATCAGAGAATTGATAGAAAAGTTGCCAAACTGTCACTGGAAC AAGCTGCAACAGTTGGGTTTATCTTATAATAATATTGGTGGAACCCTGCCAAATTGGTCA GAACCTCTGGCCAACTTAACTGTCTTGCTTCTCTCCAATACTAACATCTCAGGAGCTATG CCATCGTCGATATGGGCTCTCACAAAACTGAACATTTTGGATCTTTGTTCCAATAAGCTC AATGGCACAGTCAGGGAAGATCAATTAGGAAACCTTACAAATCTAGTGTACTTAGGGTTG GGCAATACACATCTACAGATTAAAGCCAGCTCAGATTGGATTCCTCCATTCAAACTGCAG GTAGTTCTCTTCTATTCTTTGCAGCTAGGGTCAGAAGTCCCACCATGGCTTAGATCACAA ACAAGCATTCAACACCTTCAAATTGCAAACACAAGCATTACTACAATCCCAGATTGGTTT TGGATTGTGTTTTCAAGAGCAGATTTTTTGGATGTGGCATATAATCAGATAACGGGAACG CTACCAGCAACGTTGGAGTTTATGGCAGCAAAAACCATGGATCTGTCCAACAACAGATTT ACTGGTATGGTTCCAAAATTTCCAATAAATGTAACATACATGTACTTGCAACGGAACTCA TTATCAGGACCACTGCCATCAGATTTCGGAGCCCCGTTGTTACAGTCACTTACTCTCTAT GGCAATTTAATATCAGGCACCATTCCATCTTCACTGTTCTCACTGGAACACTTGGAAATA TTAGATCTATCTGGAAATAAACTTAGTGGCGAAGTTCCAACTTATCAAGAAGATTCAAAT CCACGCACACGACAACTCATTGTCGTAAACTTAAATAGTAACAACCTCTCTGGAGAATTC CCATTGATTTTCAGAAGTTGCCCGCGCCTAGTTTTTCTTGATCTATCCTATAATCAGTTT TCTGGAAATTTACCACTGTGGATGGGAAAGAAGTTTCTGCCAATTTTATCATTGTTGCGT CTACGGTCAAATATGTTTTCGGGACACATTCCCACAGAACTTACAAGGATTGATCAATTA CAGTTCTTAGACCTCGCTGAAAACTACTTCTCTGGAAGCATACCTGACTCTTTGGTTAAC TTGAGTGCAATGGCTCGCACATCTGGATACAGTGTTCTTCTAGATGAAGTCATCGCAACT GGTCAAGGTGCAATGTAA

Peptide Sequence

PEP ID	Os12t0273900-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:10058775:10061686:-1 gene:Os12g0273900 transcript:Os12t0273900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os12t0273900-00)
Sequence	MIRSVIHEQIYIFAYYICIHSFTQKKKKNRMAEPRFPPPETLKIALLCLLLPLFSPATAS IPSAASTSSDRSCIADERAALLAIKATFFDPNSRLASWQGEDCCSWWGVRCSNRTGHVIK LRLRGNTDDCLSFYGDKLRGEMSYSLVSLQKLRYLDLSCNNFNWSQIPVFLGSLPSLRYL NLSYGFFYGSVPPQLGNLSKLAYLDLTSYSYNQLYSVALSWLSHLSSLKHLVMNHVNLTT AVDWVDEINMLPALKVLYLKQCGLRKTVPFLRRSNITGLEVLDISGNRFHTKIAPNWFWN ITSLSALDIRSCGFFGSIPDEIGRMASLEEVYFQGNNLMSTMIPSSFKNLCNLKVLDLRS TNTTGDIRELIEKLPNCHWNKLQQLGLSYNNIGGTLPNWSEPLANLTVLLLSNTNISGAM PSSIWALTKLNILDLCSNKLNGTVREDQLGNLTNLVYLGLGNTHLQIKASSDWIPPFKLQ VVLFYSLQLGSEVPPWLRSQTSIQHLQIANTSITTIPDWFWIVFSRADFLDVAYNQITGT LPATLEFMAAKTMDLSNNRFTGMVPKFPINVTYMYLQRNSLSGPLPSDFGAPLLQSLTLY GNLISGTIPSSLFSLEHLEILDLSGNKLSGEVPTYQEDSNPRTRQLIVVNLNSNNLSGEF PLIFRSCPRLVFLDLSYNQFSGNLPLWMGKKFLPILSLLRLRSNMFSGHIPTELTRIDQL QFLDLAENYFSGSIPDSLVNLSAMARTSGYSVLLDEVIATGQGAM

Transcript Sequence

Transcript ID	Os12t0273900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:10058775:10061686:-1 gene:Os12g0273900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os12t0273900-00)
Sequence	ATGATCCGAAGTGTCATTCATGAGCAAATATATATTTTTGCATATTACATTTGCATCCAT TCATTCACACAGAAAAAGAAGAAAAACAGAATGGCTGAGCCCAGGTTTCCTCCTCCTGAA ACTCTGAAGATAGCATTGCTGTGCCTTCTCCTCCCCTTGTTCTCACCAGCCACAGCATCC ATCCCTTCTGCTGCATCGACGTCGTCGGACCGGAGCTGCATCGCCGATGAGAGGGCCGCA CTTCTCGCCATAAAGGCAACCTTCTTCGACCCGAACAGCCGCCTCGCATCATGGCAGGGC GAGGATTGTTGCAGCTGGTGGGGTGTCAGGTGCAGCAACAGAACCGGCCATGTCATCAAG CTGAGACTCCGTGGGAACACAGACGACTGTCTCAGCTTCTATGGAGACAAACTCAGAGGT GAGATGAGCTACTCTTTGGTCAGTTTGCAGAAATTGAGGTATCTAGACTTGAGTTGCAAC AACTTCAATTGGTCACAGATACCGGTATTTCTTGGTTCTCTTCCAAGCCTTAGATATCTC AACCTTTCATATGGTTTCTTCTATGGAAGTGTACCCCCCCAGCTTGGCAACCTCTCCAAA CTTGCCTACCTTGATCTGACCTCTTATTCATACAACCAGCTATACTCGGTTGCCCTTTCA TGGCTGTCACACCTATCCTCACTGAAGCATCTGGTCATGAACCATGTGAACCTTACCACT GCAGTAGATTGGGTTGATGAAATCAACATGCTTCCTGCTCTGAAAGTACTCTACCTGAAA CAGTGTGGGCTGAGGAAAACAGTTCCTTTCCTTCGTCGGTCCAATATCACGGGGCTCGAA GTGCTTGACATCTCGGGAAATAGATTTCACACCAAGATTGCTCCTAACTGGTTTTGGAAT ATAACTAGTCTCTCTGCTCTTGATATCCGATCGTGTGGTTTCTTTGGCTCAATTCCAGAC GAAATAGGCAGGATGGCCTCTCTTGAAGAAGTCTATTTCCAAGGGAACAATCTCATGTCA ACCATGATACCCTCAAGTTTCAAAAATCTATGCAACCTGAAGGTGCTGGATCTACGAAGT ACCAATACTACAGGGGATATCAGAGAATTGATAGAAAAGTTGCCAAACTGTCACTGGAAC AAGCTGCAACAGTTGGGTTTATCTTATAATAATATTGGTGGAACCCTGCCAAATTGGTCA GAACCTCTGGCCAACTTAACTGTCTTGCTTCTCTCCAATACTAACATCTCAGGAGCTATG CCATCGTCGATATGGGCTCTCACAAAACTGAACATTTTGGATCTTTGTTCCAATAAGCTC AATGGCACAGTCAGGGAAGATCAATTAGGAAACCTTACAAATCTAGTGTACTTAGGGTTG GGCAATACACATCTACAGATTAAAGCCAGCTCAGATTGGATTCCTCCATTCAAACTGCAG GTAGTTCTCTTCTATTCTTTGCAGCTAGGGTCAGAAGTCCCACCATGGCTTAGATCACAA ACAAGCATTCAACACCTTCAAATTGCAAACACAAGCATTACTACAATCCCAGATTGGTTT TGGATTGTGTTTTCAAGAGCAGATTTTTTGGATGTGGCATATAATCAGATAACGGGAACG CTACCAGCAACGTTGGAGTTTATGGCAGCAAAAACCATGGATCTGTCCAACAACAGATTT ACTGGTATGGTTCCAAAATTTCCAATAAATGTAACATACATGTACTTGCAACGGAACTCA TTATCAGGACCACTGCCATCAGATTTCGGAGCCCCGTTGTTACAGTCACTTACTCTCTAT GGCAATTTAATATCAGGCACCATTCCATCTTCACTGTTCTCACTGGAACACTTGGAAATA TTAGATCTATCTGGAAATAAACTTAGTGGCGAAGTTCCAACTTATCAAGAAGATTCAAAT CCACGCACACGACAACTCATTGTCGTAAACTTAAATAGTAACAACCTCTCTGGAGAATTC CCATTGATTTTCAGAAGTTGCCCGCGCCTAGTTTTTCTTGATCTATCCTATAATCAGTTT TCTGGAAATTTACCACTGTGGATGGGAAAGAAGTTTCTGCCAATTTTATCATTGTTGCGT CTACGGTCAAATATGTTTTCGGGACACATTCCCACAGAACTTACAAGGATTGATCAATTA CAGTTCTTAGACCTCGCTGAAAACTACTTCTCTGGAAGCATACCTGACTCTTTGGTTAAC TTGAGTGCAATGGCTCGCACATCTGGATACAGTGTTCTTCTAGATGAAGTCATCGCAACT GGTCAAGGTGCAATGTAAGATATAAATTATTTCTATGAACTGGTATCAGTTCAAACAAAA GGGCAGCAACTTGAATTTTCAAGAGGAATTTCACGTGTGGTGAACCTCGACTTGTCGAAG AACAAGTTTACTGGAGCAATCCCTTGAGGCATTGGTGCTCTTGTTGCACTAAAAAGTTTG AACTTTTCTTGGAACCTCATAAATGGGGAAATCCCGGAGACTATTGGTCAGCTCAAACAA CTGGAATCTCTTGACCTATCTCACAATGAGCTTTCTGGTGAAATCCCTTCGAGCATGCAG GATCTTAACGCTTTGGGCACCATGAACCTCTCATACAACAATCTATCTGGAAGAATTCCA AGAGGAAACACTATGGGATCATATGACGCGTCTTCCTACATTGGAAACATTGGTCTATGT GGTCCTCCTTTAACTAGAAACTGTTCTGGAAATGCGACAAGCAAAGACTTACCTAGAAAT CATGTTGATTTGGAACATATATCCCTTTATCTTGGCATGGCTATTGGATTTGTCCTCAGC CTCTGGGTGGTTCTTTGTTTGCTGCTGTTCAAAACTAGTTGGAGAAAATCCTATTTCATG TTTGTTGATAGACAGCAGAAGAAGATTTATGT