Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0270900-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:9822280:9823929:-1 gene:Os12g0270900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfotransferase family protein. (Os12t0270900-01);Similar to cDNA clone:J023121F12, full insert sequence. (Os12t0270900-02)
Sequence

ATGGCAGCCCCCAGCAAGCCACAACATGGCGCCATTGGCCCCGTGCCGTTCAAGGACGTC
ATCGGAGACGCAATGGCACAGCGATCCTCACCGGAGGAGGAGTATGCCGGCGTCGTGTCC
AGCCTCCCGAGCTATCCCAAGCTGCGCCTGCGGCACTACCAGGGCATGTGGCTGATGGAG
TACACCCTTCCAGGGATCATGGCCATCCAGCGGAGCTTCGTGCCGCGCCGCCATGGCGAC
GTCGTCCTCGCGAGCCCCGGTAAGTGCGGCACCACCTGGCTCAAGGCGCTCGCCTTCGCC
GTCTTGGCGCGCGGCGCCTACTCCCCTGCCAGTGACCGGCATCCGCTCCTCCGTCTTAAC
CCGCACGACTGCGTCCCGTTCATGGAGGGGGCGATCTCTGAAGGATGGGGTGGTAAGATT
GATGAGCTGCCGTCGCCGAGGCTCATGTCCACCCACATGCAGCACGCTGCTCTACCCAAG
TCCATTGCAGATGAACCTGGCTGCAAGGTTGTTTATATTTGCAGGGAGCCGAAGGATATC
CTGGTCTCAGCCTGGCACTTCTTCAGAATTATAGAGCCTGATCTTTCATTTCAAGAAGTG
TTCGAGGCTGCCTGCGATGGCAAGTTCTTGACCGGCGCTATCTGGGATCACATTATTGGC
TACTGGAATGCTTGCAAGGCGAACCCAGAGAAGGTCCTGTTTCTGGTCTATGAGGACCTT
CTGCGAGATCCGGCAAACATCGTCAGGAAGCTCGCCGACTTTCTTGGCCAGCCGTTCTCA
TCGACCGAGGAAGAAGCTGGACTGGTGACAGATATTGTGAGGCTGTGCAGCTTCGAGAAC
CTGAAGAGCTTGGAGGTGAATAAGATGGGAGAGGCATCGTTCGCCTTCCCGAATGCGTCA
TACTTCCGGAAAGGGAAGGCCGGAGACTGGAAAATCCACATGACGCCGGAAATGGTGGAG
TGTTTTGACACCATCGTCAAGGAGAAGATGCATGGATCTGGGCTTGTTTTTGCTTGA

Peptide Sequence

PEP ID

Os12t0270900-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:9822280:9823929:-1 gene:Os12g0270900 transcript:Os12t0270900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfotransferase family protein. (Os12t0270900-01);Similar to cDNA clone:J023121F12, full insert sequence. (Os12t0270900-02)
Sequence

MAAPSKPQHGAIGPVPFKDVIGDAMAQRSSPEEEYAGVVSSLPSYPKLRLRHYQGMWLME
YTLPGIMAIQRSFVPRRHGDVVLASPGKCGTTWLKALAFAVLARGAYSPASDRHPLLRLN
PHDCVPFMEGAISEGWGGKIDELPSPRLMSTHMQHAALPKSIADEPGCKVVYICREPKDI
LVSAWHFFRIIEPDLSFQEVFEAACDGKFLTGAIWDHIIGYWNACKANPEKVLFLVYEDL
LRDPANIVRKLADFLGQPFSSTEEEAGLVTDIVRLCSFENLKSLEVNKMGEASFAFPNAS
YFRKGKAGDWKIHMTPEMVECFDTIVKEKMHGSGLVFA

Transcript Sequence

Transcript ID

Os12t0270900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:9822280:9823929:-1 gene:Os12g0270900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sulfotransferase family protein. (Os12t0270900-01);Similar to cDNA clone:J023121F12, full insert sequence. (Os12t0270900-02)
Sequence

AGGCAGAATGGCAGCCCCCAGCAAGCCACAACATGGCGCCATTGGCCCCGTGCCGTTCAA
GGACGTCATCGGAGACGCAATGGCACAGCGATCCTCACCGGAGGAGGAGTATGCCGGCGT
CGTGTCCAGCCTCCCGAGCTATCCCAAGCTGCGCCTGCGGCACTACCAGGGCATGTGGCT
GATGGAGTACACCCTTCCAGGGATCATGGCCATCCAGCGGAGCTTCGTGCCGCGCCGCCA
TGGCGACGTCGTCCTCGCGAGCCCCGGTAAGTGCGGCACCACCTGGCTCAAGGCGCTCGC
CTTCGCCGTCTTGGCGCGCGGCGCCTACTCCCCTGCCAGTGACCGGCATCCGCTCCTCCG
TCTTAACCCGCACGACTGCGTCCCGTTCATGGAGGGGGCGATCTCTGAAGGATGGGGTGG
TAAGATTGATGAGCTGCCGTCGCCGAGGCTCATGTCCACCCACATGCAGCACGCTGCTCT
ACCCAAGTCCATTGCAGATGAACCTGGCTGCAAGGTTGTTTATATTTGCAGGGAGCCGAA
GGATATCCTGGTCTCAGCCTGGCACTTCTTCAGAATTATAGAGCCTGATCTTTCATTTCA
AGAAGTGTTCGAGGCTGCCTGCGATGGCAAGTTCTTGACCGGCGCTATCTGGGATCACAT
TATTGGCTACTGGAATGCTTGCAAGGCGAACCCAGAGAAGGTCCTGTTTCTGGTCTATGA
GGACCTTCTGCGAGATCCGGCAAACATCGTCAGGAAGCTCGCCGACTTTCTTGGCCAGCC
GTTCTCATCGACCGAGGAAGAAGCTGGACTGGTGACAGATATTGTGAGGCTGTGCAGCTT
CGAGAACCTGAAGAGCTTGGAGGTGAATAAGATGGGAGAGGCATCGTTCGCCTTCCCGAA
TGCGTCATACTTCCGGAAAGGGAAGGCCGGAGACTGGAAAATCCACATGACGCCGGAAAT
GGTGGAGTGTTTTGACACCATCGTCAAGGAGAAGATGCATGGATCTGGGCTTGTTTTTGC
TTGATGCATGTGGTGGACAAGAAATTACTAAATTATTCAACTCTTTTAATACTTTTTTTT
AAAAAAACAAGATCTTTCAATAAATAATTTTAAAGGGTAGTCCAAAATGAAAAAATAGTA
ATAAAATGTAACCTAAAGTGAAATTTACTCAAAATAAACTAATCATCAAGCTCAAGAGGT
TGCTCGC