Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0270200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:9777776:9782458:1 gene:Os12g0270200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OPAQUE AND GROWTH RETARDATION 1 description:Pentatricopeptide repeat-DYW protein, RNA editing in mitochondria (Os12t0270200-01)
Sequence	ATGTCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTC CGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCG GGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCC CACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCG CTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGC CTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCG TCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTC GGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGA GATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGG AACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTC CACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACT ATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTG CACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATT GACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAG CCGGAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGG CATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGA GTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTC AGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGAC CTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTT CCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTT GAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGAC TATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTA CGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATA GATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATA TACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACA AGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGT GAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTG ATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCT TATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAG TGTTCCTGCAGGGATTACTGGTAA

Peptide Sequence

PEP ID	Os12t0270200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:9777776:9782458:1 gene:Os12g0270200 transcript:Os12t0270200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OPAQUE AND GROWTH RETARDATION 1 description:Pentatricopeptide repeat-DYW protein, RNA editing in mitochondria (Os12t0270200-01)
Sequence	MSVSAAARHLESLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALP HALLLLRSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKA SARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATW NSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYV HEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHG HGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVD LLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGD YVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEI YRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRV IKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW

Transcript Sequence

Transcript ID	Os12t0270200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:9777776:9782458:1 gene:Os12g0270200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OPAQUE AND GROWTH RETARDATION 1 description:Pentatricopeptide repeat-DYW protein, RNA editing in mitochondria (Os12t0270200-01)
Sequence	GGTCGCCGCGCCGATTAGGGGTATCCCCCCCCCCCCCCCCCCCCCCCGCGGGCGTCCATG TCGGTGTCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGC CACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGC CTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCAC GCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTC AGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTC CTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCC GCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGC GTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGAT CTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAAC TCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCAC AGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATT GTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCAC GAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGAC ATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCG GAAGACCAGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCCATGCATGGGCAT GGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTG ACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGG GTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTT CTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCA GCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAG CTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTAT GTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGT GATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGAT GGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATAC AGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGC AATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAG AAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATC AAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTAT GGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGT TCCTGCAGGGATTACTGGTAAATAGTGGCATGCTGGATCATTTAAAGGATAAATTTGGCA TGAGCTCGTGGAGATGAGGTCAAAAAGGATGATATAACATGTCTCTGATCCAGCATATCG ATTTGTATGGATACTGGAACATATTCTTGAACCATGCATATCACTTCTGACACTTCACAC AATGGGTCAAACATCAAAAGGTTGTTCGAGATATAATCCAGGGCTCCAGGCTTGCTGTTG CAGATACATTCAATTTAGTCCCCATTGAAATTAATCTTGTAAGTTAGGGTGTGGGTGGTT TGAAAATCCTCCACTTAGCCTTCACAGAGAATGATCTTGAGAATGAAATACCAAATACAG TATACACGGTTTGAGGTTTCCGGATGGTTTCTGCTGCCACTGGACCTCACAACCCTACAA AGGTTTATAATCACCAAGAGTCCAGGACACAACTGGATAGTCACAATGCCGTAGGTTACA ACTAGCATTCAGCTGGTAATGGTATGGTACTAATGAAAAACTGACATCAGGATAGGAGCA TGCTATTTTTCCTTTCAGGGAGACAACATAATTTTTCATATCTACGGAGCGAAGTTTTCC TTCAAGTCTTTGGTTCTTTGTCCCGATTCCTTAATATTTGGAAGGCCACGACGCAGGTGA AACTAGCAAAAAAAAAAGATGGACGAGCTCCGGGCCTTGTTTCTTGCCAGACTTTGTCTT CTACACGCGGCAAGAGATACAGGATGTGGACGGAGAAAAAGATGCTGGACGCGCAGACAG GCATGATATCCTACAAAATTGCTGCTCATGCTGCTGATTTGGCAAAGTGCCATCCGTATG CACAAGCATGGGACGATACACTAAGCAAGGCAAGATTTGAGTTTAGATGGTTGGATCAAT TTGCTCTGTATCTGGATCCTGTGACCACTATGTCTTTCCATGATGAAACATTACCATCGG AGGGTGCCAAAGTAGCACATTTCTGCTCAATGTGTGGCCCAAAGTCTTGTTCGATGAAAA TCACAGAGGATATTAGAAAATATGCTGATGAACATGGTTACAGGATAGTGGAGGAAGCGG TAATACCAGGAATGAATGCTATGAGTGCTGAGTTTTTGGCTGCAAGGAAAACGATCAGTG GGGAGCAACACGGTGAAGCTGGAGGGGAGATCTATGTTCCAGAAAGCTATACAGCTCGCA AATAAGATCATCTTGGCGTCCATCTACTCCGGGTGATAAAGATTTACTGACTGGAGCGTT TATCAGCAGCACTCACCATCCTATGTTAGGGAGGTGGTAAGCAGTTTATGTGCTTTGATA AAGCTGGTGTTGCTTAGCTCAGTTTCTCCTAACCCATCCACTTTTCGAGCTTGTATGCTA CTCCTTTTAGTATTGTCAAAATCTTGTTTCGACATGAAGTGAAAAGTTGTGTGAAAAGAT C