Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0270100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:9768625:9772329:-1 gene:Os12g0270100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxygen-independent coproporphyrinogen-like protein. (Os12t0270100-01);Similar to oxygen-independent coproporphyrinogen III oxidase-like protein sll1917. (Os12t0270100-02)
Sequence	ATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCCATCCCGCAAACCACCCCCAATC CGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTCCGCCGCCTCGCCTCCTCCTCCT CCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTTCTGCCGCAAGCGCTGCCACTAC TGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCCCCCGACATCCCCACACGGCGGG GACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCTCCTCCTCCGCGAGGTCGCCGCC ACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGACCGTCTTCTTCGGTGGCGGCACG CCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCTCGACGCGCTGCGGACCAGGTTC GGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGACCCCGGGACGTTCGACGCCGCC AAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGTGTCCCTCGGCGTGCAGGCGTTC CAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGGCCTGCGGGAGGTGCACGACGCG GTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTGGAGCATGGACCTCATCTCGTCG CTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTTGAGGTGCACGGTGGATGCCCGT CCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCAGGGAACTAAGTTTGGGCAACTA TATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGATTCTGCAAACTTCTATAAGATA GCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTATGAAATCAGTAGCTATTGCAAG ACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCAAAACCGGTCATTCTATGCATTT GGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTTCTCCAGGCCCAGAAGAATGAAG GAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGTGTGGAGCCATGAGTCTGGCAAT TCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCTATCACTGAGAACAGCATGGGGC CTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAGTCTGACAGAGTCATTGTGCAAC ACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGCCATGGATATGGAACGGCGAGCT TTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGATGGTGAGAATGGAAGCAGAGTT GCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTTGTCCAATGAGTTGATTTCACTT GCATTTGGAATTATTTCACCATAA

Peptide Sequence

PEP ID	Os12t0270100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:9768625:9772329:-1 gene:Os12g0270100 transcript:Os12t0270100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxygen-independent coproporphyrinogen-like protein. (Os12t0270100-01);Similar to oxygen-independent coproporphyrinogen III oxidase-like protein sll1917. (Os12t0270100-02)
Sequence	MLRSTFPLVSHLPSRKPPPIRPRPPPVRPYASSAASPPPPPPPPASAYVHLPFCRKRCHY CDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDGVPLETVFFGGGT PSLVPPRLVAAVLDALRTRFGLSASPEVSIEMDPGTFDAAKLRELVGLGVNRVSLGVQAF QEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEMWEESLRCTVDAR PTHVSVYDLQIEQGTKFGQLYTPGVYPLPNEKDSANFYKIASKRLSEAGYNHYEISSYCK TGYECKHNVTYWQNRSFYAFGLGSASYINGIRFSRPRRMKEYAEWVQKLENGVWSHESGN SGIKDMAMDVVMLSLRTAWGLDVQSFSKTFGRSLTESLCNTFRPFVESGLVIAMDMERRA LQPSEFELDLQHDGENGSRVAFIRLSDPDGFLLSNELISLAFGIISP

Transcript Sequence

Transcript ID	Os12t0270100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:9768625:9772329:-1 gene:Os12g0270100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxygen-independent coproporphyrinogen-like protein. (Os12t0270100-01);Similar to oxygen-independent coproporphyrinogen III oxidase-like protein sll1917. (Os12t0270100-02)
Sequence	ATTCCCCTACAGAAACCCAATAATGCTAAGGTCAACCTTCCCGCTCGTCTCCCACCTCCC ATCCCGCAAACCACCCCCAATCCGCCCACGCCCACCACCTGTTCGGCCCTATGCCTCTTC CGCCGCCTCGCCTCCTCCTCCTCCTCCGCCGCCGGCGTCCGCTTACGTCCACCTCCCCTT CTGCCGCAAGCGCTGCCACTACTGCGACTTCCCCATCGTCGCCCTCGGCACCTCCTCGCC CCCGACATCCCCACACGGCGGGGACGGCGACGACCCGAGGATCGCCGACTACGTCCGCCT CCTCCTCCGCGAGGTCGCCGCCACGCGCCCCGTGTCCGACGACGGGGTGCCCCTCGAGAC CGTCTTCTTCGGTGGCGGCACGCCGTCGCTGGTCCCGCCGAGGCTCGTCGCCGCGGTGCT CGACGCGCTGCGGACCAGGTTCGGGCTGTCGGCGTCCCCGGAGGTGTCCATCGAGATGGA CCCCGGGACGTTCGACGCCGCCAAGCTGAGGGAGCTGGTGGGGCTGGGCGTCAACCGGGT GTCCCTCGGCGTGCAGGCGTTCCAGGAGGACCTGCTCCGTGCGTGCGGCCGCGCGCACGG CCTGCGGGAGGTGCACGACGCGGTCGGCATCGTGACGGCGTGCGAGGGGCTGCAGAACTG GAGCATGGACCTCATCTCGTCGCTGCCCAACCAGACAGAGGAGATGTGGGAGGAGAGCTT GAGGTGCACGGTGGATGCCCGTCCCACGCATGTGTCTGTCTATGACTTGCAGATCGAGCA GGGAACTAAGTTTGGGCAACTATATACACCTGGTGTTTATCCGCTTCCAAATGAGAAAGA TTCTGCAAACTTCTATAAGATAGCTTCGAAACGTCTTTCTGAAGCAGGATATAACCATTA TGAAATCAGTAGCTATTGCAAGACTGGGTATGAGTGCAAGCACAATGTAACATATTGGCA AAACCGGTCATTCTATGCATTTGGTCTTGGATCCGCTAGCTACATCAATGGTATCAGGTT CTCCAGGCCCAGAAGAATGAAGGAATATGCAGAGTGGGTTCAGAAATTGGAAAATGGAGT GTGGAGCCATGAGTCTGGCAATTCTGGGATAAAGGACATGGCAATGGACGTGGTGATGCT ATCACTGAGAACAGCATGGGGCCTAGATGTGCAAAGTTTCAGTAAAACCTTCGGAAGGAG TCTGACAGAGTCATTGTGCAACACATTTAGGCCTTTTGTGGAGAGTGGGCTTGTAATTGC CATGGATATGGAACGGCGAGCTTTGCAACCAAGTGAATTTGAGTTGGACTTGCAACATGA TGGTGAGAATGGAAGCAGAGTTGCCTTCATCCGTCTGAGTGACCCAGATGGTTTTTTGTT GTCCAATGAGTTGATTTCACTTGCATTTGGAATTATTTCACCATAACAAGGCTACACTTT CTTTACATCGGTATCGATCTTTTTCATTTTATTACTTTCATCTGACCATACTGGTAACTA TCTAGTCTGATCTTAGTTTTCCAGGTAGATATTAGCTAATCGCTAAAATGCTTAGCATTT CTGTTCAAGTCAGTGCAAACTGAAACTCATATTGGTTGAGAGAGAACTGTTACACCATTT GCATAAATGCAAATAGATGGTT