Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0268000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:9579773:9581772:-1 gene:Os12g0268000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEKIGUCHI LESION description:Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2). (Os12t0268000-01)
Sequence	ATGGAGCTCACCATGGCGTCGACGATGTCGCTCGCGCTGCTCGTGCTCTCCGCGGCGTAC GTGTTGGTCGCGTTGAGGAGGAGCCGGTCGTCGTCGTCAAAGCCACGGCGGCTGCCGCCG TCGCCGCCGGGGTGGCCGGTGATCGGGCACCTCCACCTCATGTCCGGCATGCCGCACCAC GCGCTGGCCGAGCTGGCGCGCACCATGCGCGCGCCGCTGTTCCGGATGCGGCTGGGGAGC GTGCCGGCGGTGGTGATCTCCAAGCCGGACCTCGCCCGCGCCGCGCTCACCACCAACGAC GCCGCGCTGGCGTCGCGGCCGCACCTGCTCTCCGGCCAGTTCCTGTCGTTCGGCTGCTCC GACGTGACGTTCGCGCCGGCGGGGCCGTACCACCGGATGGCGCGCCGCGTGGTGGTGTCG GAGCTCCTGTCGGCGCGTCGCGTCGCCACGTACGGCGCCGTCAGGGTCAAGGAGCTCCGC CGCCTGCTCGCGCACCTCACCAAGAACACCTCGCCGGCGAAGCCCGTCGACCTCAGCGAG TGCTTCCTCAACCTCGCCAACGACGTGCTCTGCCGCGTCGCGTTCGGCCGCCGGTTCCCG CACGGCGAGGGCGACAAGCTCGGCGCGGTGCTCGCCGAGGCGCAGGACCTCTTCGCCGGG TTCACCATCGGCGACTTCTTCCCCGAGCTCGAGCCCGTCGCCAGCACCGTCACCGGACTC CGCCGCCGCCTCAAGAAGTGCCTCGCCGACCTCCGCGAGGCCTGCGACGTGATCGTGGAC GAACACATCAGCGGCAACCGCCAGCGCATCCCCGGCGACCGCGACGAGGACTTCGTCGAC GTCCTCCTCCGCGTCCAGAAATCCCCCGACCTCGAGGTCCCCCTAACCGACGACAATCTC AAGGCCCTCGTCCTGGACATGTTCGTCGCCGGCACGGACACCACGTTCGCGACGCTGGAG TGGGTGATGACGGAGCTAGTCCGCCACCCACGGATCCTCAAGAAGGCGCAGGAGGAGGTC CGGCGAGTCGTCGGCGACAGCGGCCGCGTCGAGGAGTCCCACCTCGGCGAGCTCCACTAC ATGCGCGCCATCATCAAGGAGACGTTCCGGCTGCACCCGGCGGTGCCGTTGCTAGTGCCG CGCGAGTCCGTCGCGCCGTGCACGCTGGGCGGCTACGACATCCCGGCGAGGACGCGGGTG TTCATCAACACGTTCGCCATGGGGCGCGACCCGGAGATCTGGGACAACCCGCTGGAGTAC TCGCCGGAGAGGTTCGAGAGCGCCGGCGGCGGCGGCGAGATCGACCTCAAGGACCCGGAC TACAAGCTGCTGCCGTTCGGCGGCGGGCGGCGAGGGTGCCCCGGCTACACGTTCGCGCTC GCCACCGTGCAGGTGTCGCTCGCCAGCTTGCTCTACCACTTCGAGTGGGCGCTGCCCGCC GGCGTGCGCGCCGAGGACGTCAACCTCGACGAGACGTTCGGCCTCGCCACGAGGAAGAAG GAGCCGCTCTTCGTCGCCGTCAGGAAGAGCGACGCGTACGAGTTTAAGGGAGAGGAGCTT AGTGAGGTTTAA

Peptide Sequence

PEP ID	Os12t0268000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:9579773:9581772:-1 gene:Os12g0268000 transcript:Os12t0268000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEKIGUCHI LESION description:Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2). (Os12t0268000-01)
Sequence	MELTMASTMSLALLVLSAAYVLVALRRSRSSSSKPRRLPPSPPGWPVIGHLHLMSGMPHH ALAELARTMRAPLFRMRLGSVPAVVISKPDLARAALTTNDAALASRPHLLSGQFLSFGCS DVTFAPAGPYHRMARRVVVSELLSARRVATYGAVRVKELRRLLAHLTKNTSPAKPVDLSE CFLNLANDVLCRVAFGRRFPHGEGDKLGAVLAEAQDLFAGFTIGDFFPELEPVASTVTGL RRRLKKCLADLREACDVIVDEHISGNRQRIPGDRDEDFVDVLLRVQKSPDLEVPLTDDNL KALVLDMFVAGTDTTFATLEWVMTELVRHPRILKKAQEEVRRVVGDSGRVEESHLGELHY MRAIIKETFRLHPAVPLLVPRESVAPCTLGGYDIPARTRVFINTFAMGRDPEIWDNPLEY SPERFESAGGGGEIDLKDPDYKLLPFGGGRRGCPGYTFALATVQVSLASLLYHFEWALPA GVRAEDVNLDETFGLATRKKEPLFVAVRKSDAYEFKGEELSEV

Transcript Sequence

Transcript ID	Os12t0268000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:9579773:9581772:-1 gene:Os12g0268000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEKIGUCHI LESION description:Similar to Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2). (Os12t0268000-01)
Sequence	GTTCATACCAACACATCTCCATTGCTGCTTAAGTTTCTTGGACCAAACGTGCACCCCAAG TGTTCGACGATATGGAGCTCACCATGGCGTCGACGATGTCGCTCGCGCTGCTCGTGCTCT CCGCGGCGTACGTGTTGGTCGCGTTGAGGAGGAGCCGGTCGTCGTCGTCAAAGCCACGGC GGCTGCCGCCGTCGCCGCCGGGGTGGCCGGTGATCGGGCACCTCCACCTCATGTCCGGCA TGCCGCACCACGCGCTGGCCGAGCTGGCGCGCACCATGCGCGCGCCGCTGTTCCGGATGC GGCTGGGGAGCGTGCCGGCGGTGGTGATCTCCAAGCCGGACCTCGCCCGCGCCGCGCTCA CCACCAACGACGCCGCGCTGGCGTCGCGGCCGCACCTGCTCTCCGGCCAGTTCCTGTCGT TCGGCTGCTCCGACGTGACGTTCGCGCCGGCGGGGCCGTACCACCGGATGGCGCGCCGCG TGGTGGTGTCGGAGCTCCTGTCGGCGCGTCGCGTCGCCACGTACGGCGCCGTCAGGGTCA AGGAGCTCCGCCGCCTGCTCGCGCACCTCACCAAGAACACCTCGCCGGCGAAGCCCGTCG ACCTCAGCGAGTGCTTCCTCAACCTCGCCAACGACGTGCTCTGCCGCGTCGCGTTCGGCC GCCGGTTCCCGCACGGCGAGGGCGACAAGCTCGGCGCGGTGCTCGCCGAGGCGCAGGACC TCTTCGCCGGGTTCACCATCGGCGACTTCTTCCCCGAGCTCGAGCCCGTCGCCAGCACCG TCACCGGACTCCGCCGCCGCCTCAAGAAGTGCCTCGCCGACCTCCGCGAGGCCTGCGACG TGATCGTGGACGAACACATCAGCGGCAACCGCCAGCGCATCCCCGGCGACCGCGACGAGG ACTTCGTCGACGTCCTCCTCCGCGTCCAGAAATCCCCCGACCTCGAGGTCCCCCTAACCG ACGACAATCTCAAGGCCCTCGTCCTGGACATGTTCGTCGCCGGCACGGACACCACGTTCG CGACGCTGGAGTGGGTGATGACGGAGCTAGTCCGCCACCCACGGATCCTCAAGAAGGCGC AGGAGGAGGTCCGGCGAGTCGTCGGCGACAGCGGCCGCGTCGAGGAGTCCCACCTCGGCG AGCTCCACTACATGCGCGCCATCATCAAGGAGACGTTCCGGCTGCACCCGGCGGTGCCGT TGCTAGTGCCGCGCGAGTCCGTCGCGCCGTGCACGCTGGGCGGCTACGACATCCCGGCGA GGACGCGGGTGTTCATCAACACGTTCGCCATGGGGCGCGACCCGGAGATCTGGGACAACC CGCTGGAGTACTCGCCGGAGAGGTTCGAGAGCGCCGGCGGCGGCGGCGAGATCGACCTCA AGGACCCGGACTACAAGCTGCTGCCGTTCGGCGGCGGGCGGCGAGGGTGCCCCGGCTACA CGTTCGCGCTCGCCACCGTGCAGGTGTCGCTCGCCAGCTTGCTCTACCACTTCGAGTGGG CGCTGCCCGCCGGCGTGCGCGCCGAGGACGTCAACCTCGACGAGACGTTCGGCCTCGCCA CGAGGAAGAAGGAGCCGCTCTTCGTCGCCGTCAGGAAGAGCGACGCGTACGAGTTTAAGG GAGAGGAGCTTAGTGAGGTTTAAGTTAAATTAAGTAATGATTAGCGATAGATAGATTTTT ATTATTTTTATTATGTTTTGGGATAATAATAAGGGTTAAAGTTTTGTGCTTGCTAAGTAA CCTGGAGGCTGGAGCTGGTAATATTGTGACTAAGCAGAGAAGCAAGCCTGTGTGATTTCG ATGTAAAAGTACAGGATATGGTGCCTAATGAATAAAAGAAGTCAATAAGTGGCGTATTTC TCTTGTAACTTGTAAGCTATATCGAATTTTAAACTTTAGAGATT