Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0264500-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:9353527:9365572:1 gene:Os12g0264500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CoA-thioester hydrolase CHY1 (3-hydroxyisobutyryl-coenzyme A hydrolase). (Os12t0264500-01);Similar to CHY1. (Os12t0264500-02);Conserved hypothetical protein. (Os12t0264500-03);Similar to cDNA clone:J013000A22, full insert sequence. (Os12t0264500-04)
Sequence	GAAAAAGAGAGGAAAAATACTACCCGTCCTCTGCTTCTCTCTTTCTTTCTCTTGCTGTGT TTTCTTCTTCCTCCCTACTACTCGGTTTCTGTCAGATCTCCGGTGAGCATCGAGGAGGTA GAGGCCGCCCCCGACGCCAACGGCGGCGGCGAGGAAGCCAATCGGCCCCGCGTGGAAGGC GACGGCGAAGGTGTCTTGCAGAGCAACGAGTCCTCCGCGAAGGTCGATGAGCCGGTAGCT ACAGAGAACAGTGACGCTGCTCCTGCTGAGGCATCTGTAGATGCTGTGAACGGCAAGATT CCTCCTACCAAGTTGATTCCCCAACATCCTCTGGAAGGTGTTACATTGACAGAAAGAACT GTACGTATTACTGGGAATAAGAAGCAGATAGAAGCGGCAAAAGATATTATTAAGCAAGCT ATGAGTCAGGTTTTGGTAGAAGCAAATGGTGTAACACGGACATTGGTTTTGAATAGGCCA AAGCAGTTGAATGCCCTCTCCTCTGCAATGATAACGTGTTTTTTGAGGTGCTTCACTGCT TATGAGGAAGATGATGGAGTTAAACTATTGATTGTGAAGGGAAAAGGAAGAGCATTTTGT GCAGGTGGAGATGTTGCTGCAGTTGTCCGGTCTATAAATAATGATAGCTGGAAATATGGT GCTCATTTTTTCCGAAATGAATTTCTGTTAAACTATATCATTGCAACATATAGCAAACCT CAGGTTTCGCTTCTAACTGGAATTGTCATGGGTGGAGGTGCTGGTGTTTCTATACATGGA AGGTTCCGAGTTGTCACAGATAGCACGGTTTTTGCTATGCCAGAAACAGCGTTGGGTCTC TTTCCAGATATTGGGGCTTCATATTTTCTATCTCGACTTCTTGGGTTCTATGGAGAGTAT GTTGGTCTTACTGGTGTAAGGTTGGATGCTGCTGAAATGCTTGCTTGTGGCCTAGCAACT CATTTTGTACCTTCAGATAGGCTGTCTTTGCTAGAAGAATCACTTAAAAAGGTTGATACA TCTGATCCATTTGCTATATGTGGAATTATCGATCAATATTCGCAACAACCATCTCTGAAA GAAAAAAGCGCTCTGAATAGGCTAGAAATCATCAACAAATGCTTTTCCAAAAAAACAGTA GAAGAAATCATAGCCTCTCTTGAACAAGAGGCTCCAAATGTTGCTGATGAATGGATTGCT TCTGCAATCCAGTCCATGAGGAAGGCTTCTCCTACTAGTATGAAAATATCCTTGAGATCG ATAAGAGAAGGGCGAACACAAACTGTTGGTGAATGCTTACGTCGAGAATATAGAATGGTT TGCCATGTGATGCGTGGTGACTTCAGTAGAGACTTCTTTGAGGGATGCAGGGCTATATTG TTGGATAGAGATCGAAACCCAAAGTGGATGCCTCCAAGGTTGGAAGAGGTGCACGACGAG GTGGTCGAAAAATATTTTTCCAAAGTCGATGATCCAGAGTGGGAAGATTTGGACCTACCT CCTAGACGTTCCCATGGAAGGAGGCTTGTTCCCAAGCTTTGA

Peptide Sequence

PEP ID	Os12t0264500-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:9353527:9365572:1 gene:Os12g0264500 transcript:Os12t0264500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CoA-thioester hydrolase CHY1 (3-hydroxyisobutyryl-coenzyme A hydrolase). (Os12t0264500-01);Similar to CHY1. (Os12t0264500-02);Conserved hypothetical protein. (Os12t0264500-03);Similar to cDNA clone:J013000A22, full insert sequence. (Os12t0264500-04)
Sequence	EKERKNTTRPLLLSFFLLLCFLLPPYYSVSVRSPVSIEEVEAAPDANGGGEEANRPRVEG DGEGVLQSNESSAKVDEPVATENSDAAPAEASVDAVNGKIPPTKLIPQHPLEGVTLTERT VRITGNKKQIEAAKDIIKQAMSQVLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTA YEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKP QVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGASYFLSRLLGFYGEY VGLTGVRLDAAEMLACGLATHFVPSDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLK EKSALNRLEIINKCFSKKTVEEIIASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRS IREGRTQTVGECLRREYRMVCHVMRGDFSRDFFEGCRAILLDRDRNPKWMPPRLEEVHDE VVEKYFSKVDDPEWEDLDLPPRRSHGRRLVPKL

Transcript Sequence

Transcript ID	Os12t0264500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:9353527:9365572:1 gene:Os12g0264500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CoA-thioester hydrolase CHY1 (3-hydroxyisobutyryl-coenzyme A hydrolase). (Os12t0264500-01);Similar to CHY1. (Os12t0264500-02);Conserved hypothetical protein. (Os12t0264500-03);Similar to cDNA clone:J013000A22, full insert sequence. (Os12t0264500-04)
Sequence	TCGAAAAAGAGAGGAAAAATACTACCCGTCCTCTGCTTCTCTCTTTCTTTCTCTTGCTGT GTTTTCTTCTTCCTCCCTACTACTCGGTTTCTGTCAGATCTCCGGTGAGCATCGAGGAGG TAGAGGCCGCCCCCGACGCCAACGGCGGCGGCGAGGAAGCCAATCGGCCCCGCGTGGAAG GCGACGGCGAAGGTGTCTTGCAGAGCAACGAGTCCTCCGCGAAGGTCGATGAGCCGGTAG CTACAGAGAACAGTGACGCTGCTCCTGCTGAGGCATCTGTAGATGCTGTGAACGGCAAGA TTCCTCCTACCAAGTTGATTCCCCAACATCCTCTGGAAGGTGTTACATTGACAGAAAGAA CTGTACGTATTACTGGGAATAAGAAGCAGATAGAAGCGGCAAAAGATATTATTAAGCAAG CTATGAGTCAGGTTTTGGTAGAAGCAAATGGTGTAACACGGACATTGGTTTTGAATAGGC CAAAGCAGTTGAATGCCCTCTCCTCTGCAATGATAACGTGTTTTTTGAGGTGCTTCACTG CTTATGAGGAAGATGATGGAGTTAAACTATTGATTGTGAAGGGAAAAGGAAGAGCATTTT GTGCAGGTGGAGATGTTGCTGCAGTTGTCCGGTCTATAAATAATGATAGCTGGAAATATG GTGCTCATTTTTTCCGAAATGAATTTCTGTTAAACTATATCATTGCAACATATAGCAAAC CTCAGGTTTCGCTTCTAACTGGAATTGTCATGGGTGGAGGTGCTGGTGTTTCTATACATG GAAGGTTCCGAGTTGTCACAGATAGCACGGTTTTTGCTATGCCAGAAACAGCGTTGGGTC TCTTTCCAGATATTGGGGCTTCATATTTTCTATCTCGACTTCTTGGGTTCTATGGAGAGT ATGTTGGTCTTACTGGTGTAAGGTTGGATGCTGCTGAAATGCTTGCTTGTGGCCTAGCAA CTCATTTTGTACCTTCAGATAGGCTGTCTTTGCTAGAAGAATCACTTAAAAAGGTTGATA CATCTGATCCATTTGCTATATGTGGAATTATCGATCAATATTCGCAACAACCATCTCTGA AAGAAAAAAGCGCTCTGAATAGGCTAGAAATCATCAACAAATGCTTTTCCAAAAAAACAG TAGAAGAAATCATAGCCTCTCTTGAACAAGAGGCTCCAAATGTTGCTGATGAATGGATTG CTTCTGCAATCCAGTCCATGAGGAAGGCTTCTCCTACTAGTATGAAAATATCCTTGAGAT CGATAAGAGAAGGGCGAACACAAACTGTTGGTGAATGCTTACGTCGAGAATATAGAATGG TTTGCCATGTGATGCGTGGTGACTTCAGTAGAGACTTCTTTGAGGGATGCAGGGCTATAT TGTTGGATAGAGATCGAAACCCAAAGTGGATGCCTCCAAGGTTGGAAGAGGTGCACGACG AGGTGGTCGAAAAATATTTTTCCAAAGTCGATGATCCAGAGTGGGAAGATTTGGACCTAC CTCCTAGACGTTCCCATGGAAGGAGGCTTGTTCCCAAGCTTTGACTGAATGAAGCCTCTG GTGAAAAACTGAAGCCTTTGTTGGTGCTTCTTAATAACAAACAGATCGTCCCCAATTTGA GGGATATGTGGAGACAAGCGATGAAGTTTATAATAAAGCTGAAACATATAATACTATAGG TTAACAATTTTATTAGTAGCAATTTAGAGAAGTCCATCTCATAGTCTCATGCGATGCTTA TATTGGTATCGCTATTGTGCTTTTTCAAGGTGTGAAGGTACGCTTCAAGCCAAAGCCCAA CTGCATAACGGCGGCCCATATGATACCGGTATCAGGCTATCCTATTAGGCTTTGAAGCTA TCTTCTGCTTGTAGATTCTAGGTAATCTTTTATATATATTGTATAAAAGAAATTCATAAG TTTGCACTGTGTTGTTTTTTAAGTAAGGCCTCGAAAAGGTAGATCCCTAATATCGAGTGT GTCTTGTAATGCACTTGAACTGATTGCATTTCGTTGATGAAATGGGAAAGGTCCACTCTC TTTGTCC