Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0263200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:9278224:9283540:-1 gene:Os12g0263200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pinoresinol-lariciresinol reductase TH2. (Os12t0263200-01)
Sequence

ATGGCCATGGAGAAGAGCCGGGTCCTCATCGTCGGCGGCACCGGCTACATCGGCCGGCGG
ATCGTGGCGGCGAGCTTGGCGGAGGGCCACCCCACCTTCGTCCTGCTCCGGCCGGAGATC
GGCCTCGACATCGACAAGCTCCAGATACTGCTGGCCTTCAAGGCGCAAGGCGCGCGGCTC
CTCGAGGCGTCGCTCGACGACCACGATGGCCTCGTCGCCGCGGTCCGGCAGGTGGACGTC
GTCGTCTCCGCCATGTCCGGCGTCCACCTCCGCAGCCACAACCTCATGCTCCAGCTCAAG
CTTGTCGAGGCCATCAAAGAAGCTGGAAATGTCAAGCGTTTCCTGCCGTCAGAATTTGGC
ATGGATCCATCAAGGATGGGGAATGCTCTTGAACCTGGGAGGGTTACATTTGATGAGAAG
ATGGAGATAAGAAGAGCAATTGAGGATGCAAAAATCCCCCACACATATGTTTCTTCCAAC
TGCTTTGCTGCTTACTTCTGTCCTAATCTCAGCCAGCTGACCTCCTTCCTCCCTCCCAAA
GAGAGAGTTAATGTGTATGGGGATGGTAACGTCAAAGCGTTTTTTGTGGATGAAGATGAT
GTGGGAACATATACAATCAAATCAATCGATGATCCTCGCACCTTGAACAAGACAATATAC
ATAAGACCACAAGATAATTGCCTCACTCATAACGAGCTGATCGCAATGTGGGAAAAACTC
TCTGGAAAAAGTCTTACGAAATTCCACATACCTGCTGAAGAATTTTTGGCTCCAATGAAA
GATATGCAATTTGCTTTTCAAGTGGGAATAACACATTTCTACCACATTTTCTACGAGGGT
TGCTTAACAAACTTTGACATTGGTGACAATGGAGCCGAAGCAACTATACTGTACCCAGAG
GTTCAGTACACCCGCATTGATGAATTCCTGAAACGCTATCTGTAA

Peptide Sequence

PEP ID

Os12t0263200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:9278224:9283540:-1 gene:Os12g0263200 transcript:Os12t0263200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pinoresinol-lariciresinol reductase TH2. (Os12t0263200-01)
Sequence

MAMEKSRVLIVGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQILLAFKAQGARL
LEASLDDHDGLVAAVRQVDVVVSAMSGVHLRSHNLMLQLKLVEAIKEAGNVKRFLPSEFG
MDPSRMGNALEPGRVTFDEKMEIRRAIEDAKIPHTYVSSNCFAAYFCPNLSQLTSFLPPK
ERVNVYGDGNVKAFFVDEDDVGTYTIKSIDDPRTLNKTIYIRPQDNCLTHNELIAMWEKL
SGKSLTKFHIPAEEFLAPMKDMQFAFQVGITHFYHIFYEGCLTNFDIGDNGAEATILYPE
VQYTRIDEFLKRYL

Transcript Sequence

Transcript ID

Os12t0263200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:9278224:9283540:-1 gene:Os12g0263200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pinoresinol-lariciresinol reductase TH2. (Os12t0263200-01)
Sequence

GTGAAGTGCACGATAGCGTCGTCCGTTGTGTGACTCATCAGATCGAGCAGAGCCATACAT
GGCCATGGAGAAGAGCCGGGTCCTCATCGTCGGCGGCACCGGCTACATCGGCCGGCGGAT
CGTGGCGGCGAGCTTGGCGGAGGGCCACCCCACCTTCGTCCTGCTCCGGCCGGAGATCGG
CCTCGACATCGACAAGCTCCAGATACTGCTGGCCTTCAAGGCGCAAGGCGCGCGGCTCCT
CGAGGCGTCGCTCGACGACCACGATGGCCTCGTCGCCGCGGTCCGGCAGGTGGACGTCGT
CGTCTCCGCCATGTCCGGCGTCCACCTCCGCAGCCACAACCTCATGCTCCAGCTCAAGCT
TGTCGAGGCCATCAAAGAAGCTGGAAATGTCAAGCGTTTCCTGCCGTCAGAATTTGGCAT
GGATCCATCAAGGATGGGGAATGCTCTTGAACCTGGGAGGGTTACATTTGATGAGAAGAT
GGAGATAAGAAGAGCAATTGAGGATGCAAAAATCCCCCACACATATGTTTCTTCCAACTG
CTTTGCTGCTTACTTCTGTCCTAATCTCAGCCAGCTGACCTCCTTCCTCCCTCCCAAAGA
GAGAGTTAATGTGTATGGGGATGGTAACGTCAAAGCGTTTTTTGTGGATGAAGATGATGT
GGGAACATATACAATCAAATCAATCGATGATCCTCGCACCTTGAACAAGACAATATACAT
AAGACCACAAGATAATTGCCTCACTCATAACGAGCTGATCGCAATGTGGGAAAAACTCTC
TGGAAAAAGTCTTACGAAATTCCACATACCTGCTGAAGAATTTTTGGCTCCAATGAAAGA
TATGCAATTTGCTTTTCAAGTGGGAATAACACATTTCTACCACATTTTCTACGAGGGTTG
CTTAACAAACTTTGACATTGGTGACAATGGAGCCGAAGCAACTATACTGTACCCAGAGGT
TCAGTACACCCGCATTGATGAATTCCTGAAACGCTATCTGTAACGGAGTATACCTAAATT
TTATAAATATTTATGTTGGTTTATGGTTTGGCAGCTTGCTTTGCTTAGTCGAATTCTCTC
TATATGTGAGAATTCAATAACACCATGCTTGTTTGAATTTATGGTATTTGTACAGCACAC
AAGCCAGCTTAAATATACTCTGTTTTACTAATTACAATTATC