Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0262700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:9246620:9250382:1 gene:Os12g0262700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0262700-01)
Sequence

ATGGCAGATGATGGTTTCAAATATCATGAGGAATATGTTACAAATAAACGAGGGATGAAG
CTCTTTGCATGCCAATGGAGTCCTTTAGACCATGAACCGAAAGCTCTAATCTTCCTATGC
CATGGATATGCCATGGAATGCAGCATTTCAATGAGAGGAACAGGTGTTCGGTTGGCAAAG
GCTGGATTTACAGTGCACGGATTGGACTATCAGGGCCATGGGAAGTCCGAAGGACTTCAA
GGCTATATCAATAGTTTTGATGATGTTGTTGTTGATTGCTCGAACTACTTTGCAAGTGTT
TGTGAAAGAGGAGAGTGCAAAGGAAAAAAGAAGTTCCTTCTTGGTGAGTCAATGGGAGGC
GCTATTGTGCTGATGCTACATAGGAAGGAACCTACAAATTGGGATGGGGCTATTTTGGTT
GCCCCCATGTGCAAGATTGTAGAAGATATGAAGCCTCGTCCCATTGTGATAACAATCCTA
AGCAAGCTTAGCAACGTGATACCTACATGGAAAATTATTCCTACTGAAGATGTCATTGAT
AAGGCAATTAAAAGCGAGGAGTGGCGTCAAGAGGTAAGAAACAATCCATATTGCTATAAA
GGAAGGCCTAGGTTAAAGACTGGTTATGAACTTTTTATGGCAAGCTTGGATATTGAAAGC
ACTCTTGACAAGGTTACACTACCATTCATCATTGTCCATGGTGGTGATGATGCCGTCACA
GATCCATCAGTAAGTGAAGAACTGTATACATCAGCTCAGAGCAAGGACAAAACACTGAAA
CTGTACCCAGGGATGTGTCACGCCCTGACATCTGGTGAGCCCGCAAGCAACATTGACATT
GTATTTTTGGACATCATTAAGTGGCTTGATGAGAGGGTATCAGTTTCATAA

Peptide Sequence

PEP ID

Os12t0262700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:9246620:9250382:1 gene:Os12g0262700 transcript:Os12t0262700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0262700-01)
Sequence

MADDGFKYHEEYVTNKRGMKLFACQWSPLDHEPKALIFLCHGYAMECSISMRGTGVRLAK
AGFTVHGLDYQGHGKSEGLQGYINSFDDVVVDCSNYFASVCERGECKGKKKFLLGESMGG
AIVLMLHRKEPTNWDGAILVAPMCKIVEDMKPRPIVITILSKLSNVIPTWKIIPTEDVID
KAIKSEEWRQEVRNNPYCYKGRPRLKTGYELFMASLDIESTLDKVTLPFIIVHGGDDAVT
DPSVSEELYTSAQSKDKTLKLYPGMCHALTSGEPASNIDIVFLDIIKWLDERVSVS

Transcript Sequence

Transcript ID

Os12t0262700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:9246620:9250382:1 gene:Os12g0262700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0262700-01)
Sequence

ATTATATTGAAAAACTATCCTTTTTATTCAGTAACTAATGATCTTCGATTGTTCTATTAA
AAAAATATTGGTCCTTGGCCATTTCCTAATCTGAGTTGCATAAAACTACATATGTTCCCA
TGGTCTTCCATTGAGAGAAAATGGCAGATGATGGTTTCAAATATCATGAGGAATATGTTA
CAAATAAACGAGGGATGAAGCTCTTTGCATGCCAATGGAGTCCTTTAGACCATGAACCGA
AAGCTCTAATCTTCCTATGCCATGGATATGCCATGGAATGCAGCATTTCAATGAGAGGAA
CAGGTGTTCGGTTGGCAAAGGCTGGATTTACAGTGCACGGATTGGACTATCAGGGCCATG
GGAAGTCCGAAGGACTTCAAGGCTATATCAATAGTTTTGATGATGTTGTTGTTGATTGCT
CGAACTACTTTGCAAGTGTTTGTGAAAGAGGAGAGTGCAAAGGAAAAAAGAAGTTCCTTC
TTGGTGAGTCAATGGGAGGCGCTATTGTGCTGATGCTACATAGGAAGGAACCTACAAATT
GGGATGGGGCTATTTTGGTTGCCCCCATGTGCAAGATTGTAGAAGATATGAAGCCTCGTC
CCATTGTGATAACAATCCTAAGCAAGCTTAGCAACGTGATACCTACATGGAAAATTATTC
CTACTGAAGATGTCATTGATAAGGCAATTAAAAGCGAGGAGTGGCGTCAAGAGGTAAGAA
ACAATCCATATTGCTATAAAGGAAGGCCTAGGTTAAAGACTGGTTATGAACTTTTTATGG
CAAGCTTGGATATTGAAAGCACTCTTGACAAGGTTACACTACCATTCATCATTGTCCATG
GTGGTGATGATGCCGTCACAGATCCATCAGTAAGTGAAGAACTGTATACATCAGCTCAGA
GCAAGGACAAAACACTGAAACTGTACCCAGGGATGTGTCACGCCCTGACATCTGGTGAGC
CCGCAAGCAACATTGACATTGTATTTTTGGACATCATTAAGTGGCTTGATGAGAGGGTAT
CAGTTTCATAATATGAGATCAGTTAACAATTGTAACCATTTGGTACATATATAGTCTCAG
CAGATTGATGTAGTGTGAGGCCTCACTTAGATGACGGAAATTGGATACAACTTCATTTTC
ATTATGTCAATTGACGCATAATTGTTCCAATGTCATTCAAATAATTTCAGCC