Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0259800-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:9073742:9077143:1 gene:Os12g0259800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 30 description:Similar to Laccase-25. (Os12t0259800-00)
Sequence	ATGATATACATTAGCATGACTCTTCACTGGTCTCTTCTGCTGTTCATTGCCATTGCTTTG GTTTCTTCAGTTGCTCAGGCTGCTGTTGTGGAGCACACCTTCAATGTTGGCAACTTCTCC ATCAGCCAACTTTGCCAGCCGCCGCTGATCATCACCGCCGTCAATGGCCAGCTGCCCGGC CCGACGATCTACGCTCGCGAGGGCGACACGGTGGTCGTACACCTCGTCAACACCTCGCCA TACAGCATGACCCTCCACTGGCATGGTGTGCTCCAACGTGGCACGCCGTGGGCGGACGGT CCGGCGATGGTGACGCAGTGCCCGGTGCAGCCCGGCGGCAACTACACGTACCGGTTCAAC GTCGACGGGCAGGAGGGCACGCTGTGGTGGCACGCCCACGTCTCGTTCCACCGCGCCACC GTCTACGGCGCACTCGTCATCAGGCCCCGCGGCGGCGCCAAGGCCTACCCGTTCCCCAAG CCCGACAAGGAGCACGTCGTCATCCTCGGCGAGTGGTGGAACGCCACCGTCTACGACATG GAGCGCATGGCGTTCCTCACCGGCATCCCGGCGCCCCACGCCGACGCCTACACCATCAAC GGCAAGCCCGGCGACTTCTACAACTGCTCCGCCCCTAATCAGACGGCCAAGTTCGAGGTG AGGCAGAACGGGACGTACTTGCTCCGGATCATCAACGCCGGGATGAACACGCCGCTGTTC TTCAAGGTGGCGAAGCACCGGCTCACCGTCGTCGGGGCCGACGCGTGCTACACCAAGCCG TACAAGACGGACGTGGTGGTGGTCTCGCCGGGGCAGACGGTGGACGCGCTCATGGTGGCC AGCGCCGCCGTGGGGCGGTACTACATGGCGGCGTCGCCGTACGACAGCGCCATCCCGCAG GGCCCGCCGTTCAGCGACACCACCGCCACGGCCATCCTGCAGTACGCCGGCGCGCGGCGC AAGACGGTGCGGTGGCGGCCGCCGGTGCTCCCGCGGCGGCCGCCCGTCAACGACACGGCC ACCGCGCACCGGTTCTTCTCCGGCATGACCGCGCTGCTGCGCCACGGCAAGCCGTCGGCG GTGCCGCTCGCCGTGGACACCCACATGTACGTCACCGTCGGGCTCGGCGTCTCCCTGTGC CAGCCGGAGCAGCTGCTCTGCAACCGGAGCGCGCCGCCGGTGTTCTCGTCGAGCATGAAC AACGCCTCCTTCGTCGTCCCCAAGAACACCTCCCTTCTCGAGGCCCACTTCAGGCGCGAG CCGGCCGGCGTCTACACCCGCGACTTCCCGGACACGCCACCGGTGGTGTTCGACTACACC GGCGACGAGAGCGACAACGCGACGATGCAGTTCACGACCAAGTCGACCAAGGTGAAGACG CTGCGGTACAACGAGACGGTGGAGATGGTGCTGCAGAACACGCGGCTGATCGCGAAAGAG AGCCACCCGATGCATATCCATGGATTTAACTTCTTCATCCTCGCGCAAGGGTTCGGCAAC TACGACAAGAGGAGGGCGGAGAGGAGGTTCAACCTCGTCGACCCTCAGGAACGTAACACC ATCGCCGTGCCCACCGGCGGCTGGGCTGTCATCCGCTTCGTCGCCGACAATCCTGGGATG TGGTACATGCACTGCCACTTCGACGCTCATATTAGCCTTGGGCTGGCCATGGTGTTGGAG GTTTTGGACGGGCCGACGCCGGAGACATCCGTGCCGCCACCGCCGGCGGACCTTCCACGG TGTTCATGA

Peptide Sequence

PEP ID	Os12t0259800-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:9073742:9077143:1 gene:Os12g0259800 transcript:Os12t0259800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 30 description:Similar to Laccase-25. (Os12t0259800-00)
Sequence	MIYISMTLHWSLLLFIAIALVSSVAQAAVVEHTFNVGNFSISQLCQPPLIITAVNGQLPG PTIYAREGDTVVVHLVNTSPYSMTLHWHGVLQRGTPWADGPAMVTQCPVQPGGNYTYRFN VDGQEGTLWWHAHVSFHRATVYGALVIRPRGGAKAYPFPKPDKEHVVILGEWWNATVYDM ERMAFLTGIPAPHADAYTINGKPGDFYNCSAPNQTAKFEVRQNGTYLLRIINAGMNTPLF FKVAKHRLTVVGADACYTKPYKTDVVVVSPGQTVDALMVASAAVGRYYMAASPYDSAIPQ GPPFSDTTATAILQYAGARRKTVRWRPPVLPRRPPVNDTATAHRFFSGMTALLRHGKPSA VPLAVDTHMYVTVGLGVSLCQPEQLLCNRSAPPVFSSSMNNASFVVPKNTSLLEAHFRRE PAGVYTRDFPDTPPVVFDYTGDESDNATMQFTTKSTKVKTLRYNETVEMVLQNTRLIAKE SHPMHIHGFNFFILAQGFGNYDKRRAERRFNLVDPQERNTIAVPTGGWAVIRFVADNPGM WYMHCHFDAHISLGLAMVLEVLDGPTPETSVPPPPADLPRCS

Transcript Sequence

Transcript ID	Os12t0259800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:9073742:9077143:1 gene:Os12g0259800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 30 description:Similar to Laccase-25. (Os12t0259800-00)
Sequence	ATGATATACATTAGCATGACTCTTCACTGGTCTCTTCTGCTGTTCATTGCCATTGCTTTG GTTTCTTCAGTTGCTCAGGCTGCTGTTGTGGAGCACACCTTCAATGTTGGCAACTTCTCC ATCAGCCAACTTTGCCAGCCGCCGCTGATCATCACCGCCGTCAATGGCCAGCTGCCCGGC CCGACGATCTACGCTCGCGAGGGCGACACGGTGGTCGTACACCTCGTCAACACCTCGCCA TACAGCATGACCCTCCACTGGCATGGTGTGCTCCAACGTGGCACGCCGTGGGCGGACGGT CCGGCGATGGTGACGCAGTGCCCGGTGCAGCCCGGCGGCAACTACACGTACCGGTTCAAC GTCGACGGGCAGGAGGGCACGCTGTGGTGGCACGCCCACGTCTCGTTCCACCGCGCCACC GTCTACGGCGCACTCGTCATCAGGCCCCGCGGCGGCGCCAAGGCCTACCCGTTCCCCAAG CCCGACAAGGAGCACGTCGTCATCCTCGGCGAGTGGTGGAACGCCACCGTCTACGACATG GAGCGCATGGCGTTCCTCACCGGCATCCCGGCGCCCCACGCCGACGCCTACACCATCAAC GGCAAGCCCGGCGACTTCTACAACTGCTCCGCCCCTAATCAGACGGCCAAGTTCGAGGTG AGGCAGAACGGGACGTACTTGCTCCGGATCATCAACGCCGGGATGAACACGCCGCTGTTC TTCAAGGTGGCGAAGCACCGGCTCACCGTCGTCGGGGCCGACGCGTGCTACACCAAGCCG TACAAGACGGACGTGGTGGTGGTCTCGCCGGGGCAGACGGTGGACGCGCTCATGGTGGCC AGCGCCGCCGTGGGGCGGTACTACATGGCGGCGTCGCCGTACGACAGCGCCATCCCGCAG GGCCCGCCGTTCAGCGACACCACCGCCACGGCCATCCTGCAGTACGCCGGCGCGCGGCGC AAGACGGTGCGGTGGCGGCCGCCGGTGCTCCCGCGGCGGCCGCCCGTCAACGACACGGCC ACCGCGCACCGGTTCTTCTCCGGCATGACCGCGCTGCTGCGCCACGGCAAGCCGTCGGCG GTGCCGCTCGCCGTGGACACCCACATGTACGTCACCGTCGGGCTCGGCGTCTCCCTGTGC CAGCCGGAGCAGCTGCTCTGCAACCGGAGCGCGCCGCCGGTGTTCTCGTCGAGCATGAAC AACGCCTCCTTCGTCGTCCCCAAGAACACCTCCCTTCTCGAGGCCCACTTCAGGCGCGAG CCGGCCGGCGTCTACACCCGCGACTTCCCGGACACGCCACCGGTGGTGTTCGACTACACC GGCGACGAGAGCGACAACGCGACGATGCAGTTCACGACCAAGTCGACCAAGGTGAAGACG CTGCGGTACAACGAGACGGTGGAGATGGTGCTGCAGAACACGCGGCTGATCGCGAAAGAG AGCCACCCGATGCATATCCATGGATTTAACTTCTTCATCCTCGCGCAAGGGTTCGGCAAC TACGACAAGAGGAGGGCGGAGAGGAGGTTCAACCTCGTCGACCCTCAGGAACGTAACACC ATCGCCGTGCCCACCGGCGGCTGGGCTGTCATCCGCTTCGTCGCCGACAATCCTGGGATG TGGTACATGCACTGCCACTTCGACGCTCATATTAGCCTTGGGCTGGCCATGGTGTTGGAG GTTTTGGACGGGCCGACGCCGGAGACATCCGTGCCGCCACCGCCGGCGGACCTTCCACGG TGTTCATGAGATCACGCCGGCGGCGAATTAAATTT