Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0258700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:8960777:8964016:1 gene:Os12g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 29 description:Cupredoxin domain containing protein. (Os12t0258700-01)
Sequence	ATGAAGTCACCTGTCCATCTCGAACATCCATTTGGTACACAAATAGTTAAGGATAATATG GCGAGATCATGGTCGCTTCTTCTTCTTCCATTTGCGCTTGCTTTGGTTGCTTCCGTTGCT CAAGCTGCTGTTGTGGAGTACACTTTCAATGTAGGTAACCTCTCCATTAGTCAGCTATGC CAGCAGGAAATGATCATAACTGCAGTGAATGGTCAGCTCCCCGGCCCGACGATCGTTGCC ACTGAGGGCGACACGGTGGTTGTTCATATGGTCAACGAGTCACCCTACAACATGACCATC CACTGGCATGGTATCTTCCAGCGCGGTACGCCATGGGCGGATGGACCGGCTATGGTCACG CAGTGTCCGGTCCGTCCCGGAGGCAACTACACTTACCGGTTCAACGTCACCGGGCAGGAG GGCACGCTGTGGTGGCACTCCCATTTTTCCTTCCTCCGCGCCACCGTCTATGGCGCGCTC ATCATCAAACCTCGCGGCGGCGCCAAGGCCTACCCGTTCCCCGTGCCCGATGAGGAGGTG GTGGTCATCCTCGGTGAGTGGTGGAAGACGAACGTGTACGACCTGCAGCAGCGCTCCCTC GTTACTGGCAATCCGGCGCCCCACGCCGACGCGTACACCATCAACGGCAAGCCCGGCGAT TTCTACAACTGCTCTGCCCCCAACCAAACGCACAAGTTCGAGCTGAAGCAGAACAAGACG TACATGCTCCGGATCATCAACGCTGCGCTCAACACGCCGCTCTTCTTCAAGGTGGCCAAC CACAGCTTCAACGTGGTGGCCGCCGACGCGTGCTACACCAAGCCGTACAAGACCGACGTG GTGGTCATCTCGCCGGGGCAGACGGTGGACGCGCTCCTGGTACCGGACGCCGGCGTCGCC GCGGCCGTCGGAGGGCGCTACTACATGGCGGTCATCCCGTACAACAGCGCCGTTAATGCT GCCGACCCAAGTTTTCTGTACAGCCTGACCAACAGCACGGCCATCGTCGAGTACGGCGGC GGCCCGGCGACCTCGCCACCCATGGTGCCGGACATGCCGGAGTACAACGACACGGCCACC GCGCACCGGTTTCTCTCCAATATGACGGCGCTGGTGCCGAACCGTGTGCCGCTCGCCGTC GACACCCACATGTTCGTCACCGTCTCCATGGGAGACACCTTCTGCGGACCGGAGCAGACG ATGTGCATGCCAGACGACAAAGGGACCATCTTCGCGTCGAGCATGAACAACGCCTCCTTC ATCCTCCCGAACACAACCTCCATGCTCGAGGCCATGTACAAGGGCTCCATCGACGGCGTC TACACCCGCGACTTCCCCGACACGCCGCCGATCGTCTTCGACTACACCGCTGACGCATCG GACGATAACGCGACGCTGAAGCACACGTTCAAGTCGACCAAGGTGAAGACGCTCAAGTAC AACTCGACGGTGCAGATGGTGCTGCAGAACACGAGGCTGGTGTCCAAGGAGAGCCACCCG ATGCACCTCCATGGCTTCAACTTCTTCGTCCTCGCACAGGGCTTCGGCAACTACAACGAG ACGACGGACCCGGCCAAGTTCAACCTCGTCGATCCGCAGGAGCGCAACACCGTCGCCGTC CCCACCGGCGGCTGGGCCGTCATCCGCTTCGTTGCAGACAACCCAGGGGTTTGGTTCATG CACTGCCACTTCGATGCTCATCTAGAGTTCGGGCTTGGCATGGTGTTTGAGGTTCAGAAC GGTCCAACGCAGGAGACATCGTTACCGCCACCACCATCGGACTTGCCACAGTGCTAG

Peptide Sequence

PEP ID	Os12t0258700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:8960777:8964016:1 gene:Os12g0258700 transcript:Os12t0258700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 29 description:Cupredoxin domain containing protein. (Os12t0258700-01)
Sequence	MKSPVHLEHPFGTQIVKDNMARSWSLLLLPFALALVASVAQAAVVEYTFNVGNLSISQLC QQEMIITAVNGQLPGPTIVATEGDTVVVHMVNESPYNMTIHWHGIFQRGTPWADGPAMVT QCPVRPGGNYTYRFNVTGQEGTLWWHSHFSFLRATVYGALIIKPRGGAKAYPFPVPDEEV VVILGEWWKTNVYDLQQRSLVTGNPAPHADAYTINGKPGDFYNCSAPNQTHKFELKQNKT YMLRIINAALNTPLFFKVANHSFNVVAADACYTKPYKTDVVVISPGQTVDALLVPDAGVA AAVGGRYYMAVIPYNSAVNAADPSFLYSLTNSTAIVEYGGGPATSPPMVPDMPEYNDTAT AHRFLSNMTALVPNRVPLAVDTHMFVTVSMGDTFCGPEQTMCMPDDKGTIFASSMNNASF ILPNTTSMLEAMYKGSIDGVYTRDFPDTPPIVFDYTADASDDNATLKHTFKSTKVKTLKY NSTVQMVLQNTRLVSKESHPMHLHGFNFFVLAQGFGNYNETTDPAKFNLVDPQERNTVAV PTGGWAVIRFVADNPGVWFMHCHFDAHLEFGLGMVFEVQNGPTQETSLPPPPSDLPQC

Transcript Sequence

Transcript ID	Os12t0258700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:8960777:8964016:1 gene:Os12g0258700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 29 description:Cupredoxin domain containing protein. (Os12t0258700-01)
Sequence	TCATCCAAAATCAAATGAAGTCACCTGTCCATCTCGAACATCCATTTGGTACACAAATAG TTAAGGATAATATGGCGAGATCATGGTCGCTTCTTCTTCTTCCATTTGCGCTTGCTTTGG TTGCTTCCGTTGCTCAAGCTGCTGTTGTGGAGTACACTTTCAATGTAGGTAACCTCTCCA TTAGTCAGCTATGCCAGCAGGAAATGATCATAACTGCAGTGAATGGTCAGCTCCCCGGCC CGACGATCGTTGCCACTGAGGGCGACACGGTGGTTGTTCATATGGTCAACGAGTCACCCT ACAACATGACCATCCACTGGCATGGTATCTTCCAGCGCGGTACGCCATGGGCGGATGGAC CGGCTATGGTCACGCAGTGTCCGGTCCGTCCCGGAGGCAACTACACTTACCGGTTCAACG TCACCGGGCAGGAGGGCACGCTGTGGTGGCACTCCCATTTTTCCTTCCTCCGCGCCACCG TCTATGGCGCGCTCATCATCAAACCTCGCGGCGGCGCCAAGGCCTACCCGTTCCCCGTGC CCGATGAGGAGGTGGTGGTCATCCTCGGTGAGTGGTGGAAGACGAACGTGTACGACCTGC AGCAGCGCTCCCTCGTTACTGGCAATCCGGCGCCCCACGCCGACGCGTACACCATCAACG GCAAGCCCGGCGATTTCTACAACTGCTCTGCCCCCAACCAAACGCACAAGTTCGAGCTGA AGCAGAACAAGACGTACATGCTCCGGATCATCAACGCTGCGCTCAACACGCCGCTCTTCT TCAAGGTGGCCAACCACAGCTTCAACGTGGTGGCCGCCGACGCGTGCTACACCAAGCCGT ACAAGACCGACGTGGTGGTCATCTCGCCGGGGCAGACGGTGGACGCGCTCCTGGTACCGG ACGCCGGCGTCGCCGCGGCCGTCGGAGGGCGCTACTACATGGCGGTCATCCCGTACAACA GCGCCGTTAATGCTGCCGACCCAAGTTTTCTGTACAGCCTGACCAACAGCACGGCCATCG TCGAGTACGGCGGCGGCCCGGCGACCTCGCCACCCATGGTGCCGGACATGCCGGAGTACA ACGACACGGCCACCGCGCACCGGTTTCTCTCCAATATGACGGCGCTGGTGCCGAACCGTG TGCCGCTCGCCGTCGACACCCACATGTTCGTCACCGTCTCCATGGGAGACACCTTCTGCG GACCGGAGCAGACGATGTGCATGCCAGACGACAAAGGGACCATCTTCGCGTCGAGCATGA ACAACGCCTCCTTCATCCTCCCGAACACAACCTCCATGCTCGAGGCCATGTACAAGGGCT CCATCGACGGCGTCTACACCCGCGACTTCCCCGACACGCCGCCGATCGTCTTCGACTACA CCGCTGACGCATCGGACGATAACGCGACGCTGAAGCACACGTTCAAGTCGACCAAGGTGA AGACGCTCAAGTACAACTCGACGGTGCAGATGGTGCTGCAGAACACGAGGCTGGTGTCCA AGGAGAGCCACCCGATGCACCTCCATGGCTTCAACTTCTTCGTCCTCGCACAGGGCTTCG GCAACTACAACGAGACGACGGACCCGGCCAAGTTCAACCTCGTCGATCCGCAGGAGCGCA ACACCGTCGCCGTCCCCACCGGCGGCTGGGCCGTCATCCGCTTCGTTGCAGACAACCCAG GGGTTTGGTTCATGCACTGCCACTTCGATGCTCATCTAGAGTTCGGGCTTGGCATGGTGT TTGAGGTTCAGAACGGTCCAACGCAGGAGACATCGTTACCGCCACCACCATCGGACTTGC CACAGTGCTAGATGATCATTGCTGAGATTCCATAGCTTTTGGGTTTAGTTCTCAGAAAGG AAATGTTTATTTCTTCATTTATTAGTTCCATGCAGTATTTCAGTATTGTAATAAGTTCAT TGATCAAGTGTGTGATGGATGTTGTGCGTTTCTCTAAGGAGGTCATCTTGTAATATTAAT CGGGAGGTTTCCATAATAAAATGAATGGATTTCCTT