Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0256000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:8792353:8797234:1 gene:Os12g0256000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0256000-01)
Sequence

ATGCCCCCCGTCGCAATCCAGCTCTACAGCCTCCTCTTCAAGCTCATCCTCCGCCGCCGC
CTCTCCTCCCTCTCCGCCTCCGCCGCCTCCTCCTCCTCCTCATTCGGCGTCTCCTCCCGC
GCCGCCGCCGACCACCACCACCCCTCGCCGCCTTCCAATCCCTCCTTCTCCTCCGCCGCC
GGCGCTGACGCTGTTGCCACCAAGGACCTCCACCCCGACCCGCTCTCCTCCCTCCACCTC
CGCCTCTTCCTCCCCAACCCGCACCACAGCGCCGCCCCCGCCGCCGCCGCGAACGCTCCG
CCTCCGCTGCGGCGGAACTCGTTCCCGCAGCCAGCGCACGACGGGGGCAGCCCCGCGGCG
GCGGTGGGGCAGGAGCTCTCCCGCCGCGCCAGCGCGAGCTTCAGCGGGGTGTCGCCCTCC
GCCGCGCCGTGCTACGGCGGGTACCTGCCGACGGCGCGCTCCGGGAGGAGGCTGCCGGTG
ATCGTGCAGTTCCACGGGGGCGCGTTCGCCACGGGCGCGGCCGACAGCGCCGCCAACGAC
GCCTTCTGCCGCCGCGTCGCGCGGCTCTGCGACGCCATCGTGGTGGCCGTCGGGTACCGG
CTCGCGCCGGAGAGCAGGTACCCCGCCGCGTTCGAGGACGGGGTCACGGTGCTCAAATGG
ATCGCCAAGCAGGCCAACCTCGCCGCGTGCGGGCGGACGATGGCGAGGGGGGCGGGCTCT
GGAGGGGCCGATTCGTTCGGCGCGGCGTTGGTCGAGCCGTGGCTAGCTGCGCACGCCGAT
CCATCCAGGTGTGTTCTCCTTGGTGTCAGCTGCGGAGCGAACATTGCTGACTATGTGGCT
CGAAAAGCTGTTGAGGCTGGGAAACTCCTCGACCCCATCAAGGTCGTCGCTCAGGTTTTG
ATGTATCCATTTTTCATGGGGACTAGTCCCACGCAATCGGAACTGAAGCTGGCAAACTCC
TATTTCTATGACAAGTCAACGTGCTTACTGGCCTGGAAACTCTTCTTGCCTGAGGGTGAA
TTCAGCTTGGATCATCCAGCTGCAAACCCTCTTGTTCCCGGTAAAGGTCCCCCTTTGAAG
CTCATTCCTCCAACATTGACAGTTGTTGCGGAGCTGGACTGGATGAAGGACCGCGCGATC
GCTTACTCGGAGGAGCTCCGCAAGGTAAATGTGGATGCCCCTGTTCTCGAGTACAAGGAT
GCGGTCCATGAGTTCGCCACGCTGGACGTCTTGCTGAAAACACCACTGGCTCAGGCTTGC
GCCGAAGATATAGCCATCTGGGTTAAGAAGTACATATCACTGCGTGGCCATGAATTATCA
TATTGA

Peptide Sequence

PEP ID

Os12t0256000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:8792353:8797234:1 gene:Os12g0256000 transcript:Os12t0256000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0256000-01)
Sequence

MPPVAIQLYSLLFKLILRRRLSSLSASAASSSSSFGVSSRAAADHHHPSPPSNPSFSSAA
GADAVATKDLHPDPLSSLHLRLFLPNPHHSAAPAAAANAPPPLRRNSFPQPAHDGGSPAA
AVGQELSRRASASFSGVSPSAAPCYGGYLPTARSGRRLPVIVQFHGGAFATGAADSAAND
AFCRRVARLCDAIVVAVGYRLAPESRYPAAFEDGVTVLKWIAKQANLAACGRTMARGAGS
GGADSFGAALVEPWLAAHADPSRCVLLGVSCGANIADYVARKAVEAGKLLDPIKVVAQVL
MYPFFMGTSPTQSELKLANSYFYDKSTCLLAWKLFLPEGEFSLDHPAANPLVPGKGPPLK
LIPPTLTVVAELDWMKDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKTPLAQAC
AEDIAIWVKKYISLRGHELSY

Transcript Sequence

Transcript ID

Os12t0256000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:8792353:8797234:1 gene:Os12g0256000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0256000-01)
Sequence

GGAAGGCCACCTCTCCCATGGCACCACCACCACCCTGACGCCGACGCCGACGCCGACTGA
CTCACCCGCCGGCGAGCCCACGCCGCCCACCGCCGGAGACGGCCATGCCCCCCGTCGCAA
TCCAGCTCTACAGCCTCCTCTTCAAGCTCATCCTCCGCCGCCGCCTCTCCTCCCTCTCCG
CCTCCGCCGCCTCCTCCTCCTCCTCATTCGGCGTCTCCTCCCGCGCCGCCGCCGACCACC
ACCACCCCTCGCCGCCTTCCAATCCCTCCTTCTCCTCCGCCGCCGGCGCTGACGCTGTTG
CCACCAAGGACCTCCACCCCGACCCGCTCTCCTCCCTCCACCTCCGCCTCTTCCTCCCCA
ACCCGCACCACAGCGCCGCCCCCGCCGCCGCCGCGAACGCTCCGCCTCCGCTGCGGCGGA
ACTCGTTCCCGCAGCCAGCGCACGACGGGGGCAGCCCCGCGGCGGCGGTGGGGCAGGAGC
TCTCCCGCCGCGCCAGCGCGAGCTTCAGCGGGGTGTCGCCCTCCGCCGCGCCGTGCTACG
GCGGGTACCTGCCGACGGCGCGCTCCGGGAGGAGGCTGCCGGTGATCGTGCAGTTCCACG
GGGGCGCGTTCGCCACGGGCGCGGCCGACAGCGCCGCCAACGACGCCTTCTGCCGCCGCG
TCGCGCGGCTCTGCGACGCCATCGTGGTGGCCGTCGGGTACCGGCTCGCGCCGGAGAGCA
GGTACCCCGCCGCGTTCGAGGACGGGGTCACGGTGCTCAAATGGATCGCCAAGCAGGCCA
ACCTCGCCGCGTGCGGGCGGACGATGGCGAGGGGGGCGGGCTCTGGAGGGGCCGATTCGT
TCGGCGCGGCGTTGGTCGAGCCGTGGCTAGCTGCGCACGCCGATCCATCCAGGTGTGTTC
TCCTTGGTGTCAGCTGCGGAGCGAACATTGCTGACTATGTGGCTCGAAAAGCTGTTGAGG
CTGGGAAACTCCTCGACCCCATCAAGGTCGTCGCTCAGGTTTTGATGTATCCATTTTTCA
TGGGGACTAGTCCCACGCAATCGGAACTGAAGCTGGCAAACTCCTATTTCTATGACAAGT
CAACGTGCTTACTGGCCTGGAAACTCTTCTTGCCTGAGGGTGAATTCAGCTTGGATCATC
CAGCTGCAAACCCTCTTGTTCCCGGTAAAGGTCCCCCTTTGAAGCTCATTCCTCCAACAT
TGACAGTTGTTGCGGAGCTGGACTGGATGAAGGACCGCGCGATCGCTTACTCGGAGGAGC
TCCGCAAGGTAAATGTGGATGCCCCTGTTCTCGAGTACAAGGATGCGGTCCATGAGTTCG
CCACGCTGGACGTCTTGCTGAAAACACCACTGGCTCAGGCTTGCGCCGAAGATATAGCCA
TCTGGGTTAAGAAGTACATATCACTGCGTGGCCATGAATTATCATATTGACTGTGTCGCG
GTGCGCTTTCAACGAGATTTTCACCTGAGCTGCGCCCTTCAAGGCTTCGCAATGGTCACT
CCACTACTTCATTTACCTCCCATGCTGCACTGAAACCATTTGATGAAGCAGGGAGAGGTA
CACTGGCCGAGTGGTAACATGGGTGCTGAAGAAAGGAGGGGGAGAGAGAGAGATGCTCTG
TGATGTAAGTTGGTTCTTTTATGGCAATTTAGGTTGCCTGGGGTCAAGGATCTGAGTGTA
ATCTAGTACAGGACGGTTGTTGTATATTTCCACGTTCTAATGGCATCTCAAGTTTTCATG
TATTCGCTTCCCTGTCCATAGATCTGCTTGGCCTGATCAAAGCGGTTTATTCTGTTTCTG
TTTTTACCCCCTGGTAATGAGTTGATATGCAAAACGCATCTTATAAATGGGAGGAGTGAT
CAAACGGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCTGTATGTATGTATGT
ATGTATATTTATTTATTTATTTATTTATTTATTCGATTATTGTG