Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0255200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:8726067:8737949:-1 gene:Os12g0255200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Staphylococcal nuclease (SNase-like), OB-fold domain containing protein. (Os12t0255200-01);Conserved hypothetical protein. (Os12t0255200-02)
Sequence	ATGGGGAACATCCTCAAGTGCTTCATCAGTTGCTTCGACGGAGAAGACGAAGATGGTGGT AGTGGCCATGGTCGCTTCCCCAACAGCTATCCTCCGGTCTCAAGTCTCCATTACCAGCCT CTGCATTTGGATGACCTTCAAGTGCCATTATCGCCTCCACCACCATCAACTAGGCAGCAG CAGCCGCCACCGCGACCGGCGCTCTCAAGACTCCATTACCAGCCTCTACGTTTGGCTGAC CTTCAAGTGCCATTATCACCTCCACCACCATCAACTAGGCAGCAGCAGCTGCCACCGCGA CCGGCACGTCCTCTTGGTTACCATCATGGAGTCCTCTGGCCGACGATAGAGATCACCCCA TGCGATGACTTCCTCAACTTAGAATTCACAACTAAGGTTTGTGAAGGGCCCCAGCATCAC AGTACACCATCCAGGAAGACGGACCTTAATAGGTGTATCCATGAAAAAGACGATGGCAAC AGTAAACCCTCCTACTACTGGCTGACCAAGAACAAAGACAATCATGTAGTAACCCCTCAG ACCAAACGGTCACCTCGGCCCCCTAGTGGGGTAGCTGCCCTGGAGCGTGACCTCGTCGAC TTTACTCGGACCTTTGAGGTTCCTGAAGGGCTTGCACAGCATGTTACATCACCTATGCAG GCACAGGTTACATGGTATAGGAAATTGTTGGCCGCATACAAGGATATAAAATATCCACCC AAAGAATCAGCAGATGCTGCTGTGCTTGTTGCTGCAACCTTGAGAGGGATCGAACGAACT AATTTGGAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCA TCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCG GTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGAT CCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTAAGAAGCAA AAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAG AAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGC ATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAA CTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTC GTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCAT GCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCA CGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGA AAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGA

Peptide Sequence

PEP ID	Os12t0255200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:8726067:8737949:-1 gene:Os12g0255200 transcript:Os12t0255200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Staphylococcal nuclease (SNase-like), OB-fold domain containing protein. (Os12t0255200-01);Conserved hypothetical protein. (Os12t0255200-02)
Sequence	MGNILKCFISCFDGEDEDGGSGHGRFPNSYPPVSSLHYQPLHLDDLQVPLSPPPPSTRQQ QPPPRPALSRLHYQPLRLADLQVPLSPPPPSTRQQQLPPRPARPLGYHHGVLWPTIEITP CDDFLNLEFTTKVCEGPQHHSTPSRKTDLNRCIHEKDDGNSKPSYYWLTKNKDNHVVTPQ TKRSPRPPSGVAALERDLVDFTRTFEVPEGLAQHVTSPMQAQVTWYRKLLAAYKDIKYPP KESADAAVLVAATLRGIERTNLEGILAFYGFPIPTISKEASENHPSSIPKGVLFVLKTLP VNAKCIVDGDGFTAYVDTLDPIELRQDCNASCQSRNSKKQKLWDKTAADLQISLENTGQK KMFFGGREILARKYEIRLRGIDAPEIGMQYGKESQDALVKLIARKCVTLHVYGQDQFKRF VCDIHCGGVFIQEQMLVNGHAWHFKNYDKRPQFAKWEKMARDARQGLWAYDNLEKPWEWR KNKRKASRHHNSDVR

Transcript Sequence

Transcript ID	Os12t0255200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:8726067:8737949:-1 gene:Os12g0255200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Staphylococcal nuclease (SNase-like), OB-fold domain containing protein. (Os12t0255200-01);Conserved hypothetical protein. (Os12t0255200-02)
Sequence	GTAGCATCATCCTTTTTGGGTCCTTAGCTCAGAAGCAAGGATAGCTTTCCATGATTCCAT CACTCATTAATAGCTAGGTACAAGGAGAAGATGGCAAACTAGAGGGATCAGGAGTAGCAC CAGATCACATAGAAGGTGAGGTTCCATGGGGAACATCCTCAAGTGCTTCATCAGTTGCTT CGACGGAGAAGACGAAGATGGTGGTAGTGGCCATGGTCGCTTCCCCAACAGCTATCCTCC GGTCTCAAGTCTCCATTACCAGCCTCTGCATTTGGATGACCTTCAAGTGCCATTATCGCC TCCACCACCATCAACTAGGCAGCAGCAGCCGCCACCGCGACCGGCGCTCTCAAGACTCCA TTACCAGCCTCTACGTTTGGCTGACCTTCAAGTGCCATTATCACCTCCACCACCATCAAC TAGGCAGCAGCAGCTGCCACCGCGACCGGCACGTCCTCTTGGTTACCATCATGGAGTCCT CTGGCCGACGATAGAGATCACCCCATGCGATGACTTCCTCAACTTAGAATTCACAACTAA GGTTTGTGAAGGGCCCCAGCATCACAGTACACCATCCAGGAAGACGGACCTTAATAGGTG TATCCATGAAAAAGACGATGGCAACAGTAAACCCTCCTACTACTGGCTGACCAAGAACAA AGACAATCATGTAGTAACCCCTCAGACCAAACGGTCACCTCGGCCCCCTAGTGGGGTAGC TGCCCTGGAGCGTGACCTCGTCGACTTTACTCGGACCTTTGAGGTTCCTGAAGGGCTTGC ACAGCATGTTACATCACCTATGCAGGCACAGGTTACATGGTATAGGAAATTGTTGGCCGC ATACAAGGATATAAAATATCCACCCAAAGAATCAGCAGATGCTGCTGTGCTTGTTGCTGC AACCTTGAGAGGGATCGAACGAACTAATTTGGAGGGCATTCTTGCATTTTATGGCTTTCC AATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGT GCTGTTCGTGCTAAAAACATTGCCGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTT TACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTG TCAATCCCGTAACTCTAAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAAT AAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAG AAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAA GGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTA TGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCA GGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACA ATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAA CCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTC AGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATT TGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGA TGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACTAATATTT GAG