Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0250900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:8496419:8497978:-1 gene:Os12g0250900 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os12t0250900-01)
Sequence

ATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCTGGAGCACGCGGATCCGCCCTCCGGA
GCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGCAGCTACGGCGGCGGCGGAGGCTACG
GCGACGACGGCGCCGGTGGCTGCAACGACGACGACGGCGCCGATAGCTGCGACGACGACA
ATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAATCGCGGGGCGGGCAGGTGGCGCGGG
GCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGCCTCCTCGCCGCCCTCGACCGTCGAC
GCCCCGCACCACCTCCTCGCCGCTCACGACCGCCTCCTAGCGCGGAGGCTTCGGACGCTC
GTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAAGGAGGGGAGGCGCCTCCCCAAGAAA
CCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCTAGTCCCTGAGCTGCCCACTTTCCCG
CGTTCACGATCCAAGAAAAATGCAAGCATGGAGGATATATGCTTGAAAGAATTACCTGAT
GATTTCTGCAATACTTCATATACGACCGATGTGCTTGTGGTTGCTGATTCAGGTTCTGAT
TGCGAGCATCAGCGATGGTCTGATTCCTCCCTACTGAAAGAAGTAAGAACTATTATATCA
ATTATTGTCCTTGCATGA

Peptide Sequence

PEP ID

Os12t0250900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:8496419:8497978:-1 gene:Os12g0250900 transcript:Os12t0250900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os12t0250900-01)
Sequence

MNPAASVLGNGLEHADPPSGAAAVCLGRRERAATAAAEATATTAPVAATTTTAPIAATTT
MTMTSGRSAACNRGAGRWRGAAGPRGRAGAGASSPPSTVDAPHHLLAAHDRLLARRLRTL
VVSQRWFEDCLKEGRRLPKKPYMLESGEEAGLVPELPTFPRSRSKKNASMEDICLKELPD
DFCNTSYTTDVLVVADSGSDCEHQRWSDSSLLKEVRTIISIIVLA

Transcript Sequence

Transcript ID

Os12t0250900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:8496419:8497978:-1 gene:Os12g0250900 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os12t0250900-01)
Sequence

ATTCCCCCACCGCCACCATCCACCGCGCTGCCTCCATCTCCGCCCCCAGCCACCTCTTCG
CCCTTCCCAGCCTCACTCCCCCAGCCAGGGAAGGACAGTGGAGCGCGGATCCGCCGCCTC
CCGTCCTCGGTAACGATGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAACGGCCT
GGAGCACGCGGATCCGCCCTCCGGAGCGGCGGCGGTGTGCTTAGGCAGGCGGGAGCGAGC
AGCTACGGCGGCGGCGGAGGCTACGGCGACGACGGCGCCGGTGGCTGCAACGACGACGAC
GGCGCCGATAGCTGCGACGACGACAATGACGATGACCAGCGGCAGGTCGGCGGCTTGCAA
TCGCGGGGCGGGCAGGTGGCGCGGGGCCGCGGGGCCGCGGGGGCGCGCCGGCGCGGGGGC
CTCCTCGCCGCCCTCGACCGTCGACGCCCCGCACCACCTCCTCGCCGCTCACGACCGCCT
CCTAGCGCGGAGGCTTCGGACGCTCGTCGTCAGCCAACGGTGGTTCGAGGACTGCCTCAA
GGAGGGGAGGCGCCTCCCCAAGAAACCCTACATGTTGGAAAGTGGTGAAGAAGCAGGGCT
AGTCCCTGAGCTGCCCACTTTCCCGCGTTCACGATCCAAGAAAAATGCAAGCATGGAGGA
TATATGCTTGAAAGAATTACCTGATGATTTCTGCAATACTTCATATACGACCGATGTGCT
TGTGGTTGCTGATTCAGGTTCTGATTGCGAGCATCAGCGATGGTCTGATTCCTCCCTACT
GAAAGAAGTAAGAACTATTATATCAATTATTGTCCTTGCATGATTTGATTTCCTGGTAGA
ATCCTTTACTGGGACTACATTCCACAAGTTAAGTTATATTCTGTTCAGTACTATGGTTTA
GCAGACTACATTTCACCACGACCGCACTAGTTGCTGTTCAGTCAGTTCAGACAACAACCA
TGCAATTGTTTGGCATACCTGTCTATTGGCATTGCTGAATGCCAATCATGGCCTTATTAC
CAAGTGAAAAAAGTGCTGGATGATGGTGGATCTGTTTTTTTTT