Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0245100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:8031420:8036687:1 gene:Os12g0245100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 11 description:Conserved hypothetical protein. (Os12t0245100-01)
Sequence

ATGGCGGCTGCAGGCGGCGGATCGTTGCTGGATCAGTCGAGGCACGCCATGCGCAGCTGG
GTACTCAAGAATATAGAGAAATTGGCAGGACATTATGGTGCAGAGTTCAACTCTTTGCGG
GCATTTGAGGACAGGGTATTCAATGAGACCAGCAGCATTGATGATTATATTTCTAAAATA
TCAACGAAGATGGCTATTTTGGAGCGACCGCAGTCTTCTTCAGGTATGCAGCATCAAGGG
CAGATGGGAAATCAAACGAGGCTGCCTACTACAGTTATGCAAGAACAGCCACAGCCACAG
CAGCAGCCGCATTTGATGTCAAATAATCATCACCAAACACATGGAGGATGGCAGAGCAAT
GTTGCAAGGGTACAGATGATCACTGGTGTTGGAGAAGTGAATTGGAGGGAGGAAATGTTT
CAGAAGATCAGCGTTTTAAAGAACTCTTTCTTTTCCGAGCTTACGGATTTTGACCGTTTA
CTTCACAATTGCCAAAAAACAGAAGAACAGTTGCAGTCACTACCTAAAAAGCAAGCTGAC
CAATACAAGCGGATAACAAAGCTCAAGGATGCGGTTAGGAGTGCTCTGGATTTATTGCAG
CTCCAGAAGAGCAGCATCGATGAAGGCATGAAGGTGAAATTCTGCAAGTACGAAAGCTCC
ATACATAGCCTACTCAGATTCTACAGGGAAACAAAAGCTAAAATTAATGAGATGAATGCA
AATCGTCATAACAATCAGCAAGAGCAACCTGCAGGCCTGCCGAGGCAAAGAATTACTGAC
AGAACTCCATCGTCAGCTCGTCGGCAAAACCGCAATGACAACGTGATAGGCCAATCAGAG
GATAAATTGCGATGCAGGGTTGAATCAGTTGTAGCCAAGAAGAAGCCCATCGACCGCCTA
ATCAACGCTCTGCGGCACAGTGTAGAGGATGACCGTACGGACGTCAAGAGGCAGAAAACA
CGGCATGTTAACAGTGCCCTGGCGAACGAGATCGACGCCATGAACGCCAAGCTGATCGAT
ACCGTGGTTAGAATCGCCGGTGAGAAAGATGGTGGGACAGAGATTGAATTCAGCTACACT
GCAGTGTCTCTTGCACTAGACATGAAGCAGCTATTTGCAGCATATGGGACGTCTCCTGTC
AAGCCGGTGAAACTATTCGTCCCTGCTGATTACCCTCGAAGTTCTCCGGTGGTCTCGAAC
AACAACGATGATGGAGATGAACAGCGGCGAGGAATGTTCGGCGAGATCTCGGGCATGGTC
AGTGCGGCTTTTCACTGCGCGCTGCGTGAGCTCCCGCCGTCCATGTCAGTCAAGCAGATG
GCCTCGGAGTGGAATTCCTGCGTGCAGATGATCATGAAGAAATTTGCGATACGGCACGGT
GGAGGAACGTTCAGCTCCAGGCATGGCCAGTGGATGGATTGCACCGTTGAATGA

Peptide Sequence

PEP ID

Os12t0245100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:8031420:8036687:1 gene:Os12g0245100 transcript:Os12t0245100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 11 description:Conserved hypothetical protein. (Os12t0245100-01)
Sequence

MAAAGGGSLLDQSRHAMRSWVLKNIEKLAGHYGAEFNSLRAFEDRVFNETSSIDDYISKI
STKMAILERPQSSSGMQHQGQMGNQTRLPTTVMQEQPQPQQQPHLMSNNHHQTHGGWQSN
VARVQMITGVGEVNWREEMFQKISVLKNSFFSELTDFDRLLHNCQKTEEQLQSLPKKQAD
QYKRITKLKDAVRSALDLLQLQKSSIDEGMKVKFCKYESSIHSLLRFYRETKAKINEMNA
NRHNNQQEQPAGLPRQRITDRTPSSARRQNRNDNVIGQSEDKLRCRVESVVAKKKPIDRL
INALRHSVEDDRTDVKRQKTRHVNSALANEIDAMNAKLIDTVVRIAGEKDGGTEIEFSYT
AVSLALDMKQLFAAYGTSPVKPVKLFVPADYPRSSPVVSNNNDDGDEQRRGMFGEISGMV
SAAFHCALRELPPSMSVKQMASEWNSCVQMIMKKFAIRHGGGTFSSRHGQWMDCTVE

Transcript Sequence

Transcript ID

Os12t0245100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:8031420:8036687:1 gene:Os12g0245100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 11 description:Conserved hypothetical protein. (Os12t0245100-01)
Sequence

CAATGTAACCACAGCTATCGTCTGCCCTAGAGAGAGTTGAGACCACGCTGCCTAGTAGGT
TGACTCCGCCGCCTCGACCAGCAACGCTGCCGCCATTTGCACACGCTAGCTCGACCTCTT
GCTCTGTTGTCGTCGTTCTCGCTTCCGATGGCGGCTGCAGGCGGCGGATCGTTGCTGGAT
CAGTCGAGGCACGCCATGCGCAGCTGGGTACTCAAGAATATAGAGAAATTGGCAGGACAT
TATGGTGCAGAGTTCAACTCTTTGCGGGCATTTGAGGACAGGGTATTCAATGAGACCAGC
AGCATTGATGATTATATTTCTAAAATATCAACGAAGATGGCTATTTTGGAGCGACCGCAG
TCTTCTTCAGGTATGCAGCATCAAGGGCAGATGGGAAATCAAACGAGGCTGCCTACTACA
GTTATGCAAGAACAGCCACAGCCACAGCAGCAGCCGCATTTGATGTCAAATAATCATCAC
CAAACACATGGAGGATGGCAGAGCAATGTTGCAAGGGTACAGATGATCACTGGTGTTGGA
GAAGTGAATTGGAGGGAGGAAATGTTTCAGAAGATCAGCGTTTTAAAGAACTCTTTCTTT
TCCGAGCTTACGGATTTTGACCGTTTACTTCACAATTGCCAAAAAACAGAAGAACAGTTG
CAGTCACTACCTAAAAAGCAAGCTGACCAATACAAGCGGATAACAAAGCTCAAGGATGCG
GTTAGGAGTGCTCTGGATTTATTGCAGCTCCAGAAGAGCAGCATCGATGAAGGCATGAAG
GTGAAATTCTGCAAGTACGAAAGCTCCATACATAGCCTACTCAGATTCTACAGGGAAACA
AAAGCTAAAATTAATGAGATGAATGCAAATCGTCATAACAATCAGCAAGAGCAACCTGCA
GGCCTGCCGAGGCAAAGAATTACTGACAGAACTCCATCGTCAGCTCGTCGGCAAAACCGC
AATGACAACGTGATAGGCCAATCAGAGGATAAATTGCGATGCAGGGTTGAATCAGTTGTA
GCCAAGAAGAAGCCCATCGACCGCCTAATCAACGCTCTGCGGCACAGTGTAGAGGATGAC
CGTACGGACGTCAAGAGGCAGAAAACACGGCATGTTAACAGTGCCCTGGCGAACGAGATC
GACGCCATGAACGCCAAGCTGATCGATACCGTGGTTAGAATCGCCGGTGAGAAAGATGGT
GGGACAGAGATTGAATTCAGCTACACTGCAGTGTCTCTTGCACTAGACATGAAGCAGCTA
TTTGCAGCATATGGGACGTCTCCTGTCAAGCCGGTGAAACTATTCGTCCCTGCTGATTAC
CCTCGAAGTTCTCCGGTGGTCTCGAACAACAACGATGATGGAGATGAACAGCGGCGAGGA
ATGTTCGGCGAGATCTCGGGCATGGTCAGTGCGGCTTTTCACTGCGCGCTGCGTGAGCTC
CCGCCGTCCATGTCAGTCAAGCAGATGGCCTCGGAGTGGAATTCCTGCGTGCAGATGATC
ATGAAGAAATTTGCGATACGGCACGGTGGAGGAACGTTCAGCTCCAGGCATGGCCAGTGG
ATGGATTGCACCGTTGAATGATTTAGTACCGTGAGGTACCGATACCTCGAGATACTTTTT
GTTGTACCGAAGCAAATCTCTTAATTATTACATGAGGATGAAGTGATACGGAGAACCGTA
TTTGATCTGTTGTTATTGCTGCTGGAGGGTACATGCATAATCCGCTCTGTGTATCATTTG
TTTTGATTAAGCTGGTATTGCTTTTGATATTTCTCTGTCTGGATTTTGTAATTGGAACAA
GCAAAATCGCTTGTAGGACATGTATTTCTGAAAATGGTAACTATCTATCTTTGAAGAGCC
C