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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0244500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:8000498:8004474:-1 gene:Os12g0244500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0244500-01)
Sequence

ATGTCCCAAGTTGGATCCGCCCCTGCTTTCAGGACTGGGTCACCTAAGAAGCATGAACTG
AAGTCCAAACAGAAGCTTGAGAAGAAGCTCAGCTTCTACACAAAAGTGAAAGATGCAGTA
ACCTCCCTAAATGCTACAAAGACTATCTGCAAGAAATCTAAACAGAGGAGCCGCCAGAAG
AAACTGAAAGCATATGATCTCTCAATGCTCTCTGAGTTCCTTCCTGAAACAGATGCCTCA
AATCTGCACACCGAAGCAAAACTGAACTGCAAATCGAAGCAAGCTTTAGTGCAACGGGAG
GCTGCCCAACTGAATGCTGTGCTGACCAATCCGCAGTTCCAGCTCGACCCGTTTGCGGCG
ATCCATCAGCACCTGTTGTCAACACAGCCACCCTCTGCGAGAAAGGAGAGCAATTCCGCC
AAGCAGGGGAAGGACCCTAAGGACAAGAAAAGAAAGAACAAGAAGAAGAATGCTTCATCG
GCCTCCGAGGCAATGGATATCTGA

Peptide Sequence

PEP ID

Os12t0244500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:8000498:8004474:-1 gene:Os12g0244500 transcript:Os12t0244500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0244500-01)
Sequence

MSQVGSAPAFRTGSPKKHELKSKQKLEKKLSFYTKVKDAVTSLNATKTICKKSKQRSRQK
KLKAYDLSMLSEFLPETDASNLHTEAKLNCKSKQALVQREAAQLNAVLTNPQFQLDPFAA
IHQHLLSTQPPSARKESNSAKQGKDPKDKKRKNKKKNASSASEAMDI

Transcript Sequence

Transcript ID

Os12t0244500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:8000498:8004474:-1 gene:Os12g0244500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0244500-01)
Sequence

GTTGTCTCCTCCTCCGCTCCTTTGCGCCGCCGCCAACACACAGGGCAGGGCGCGCCGATC
TCCATCTGGCGAGCAGAGAAGGGGAGGGGAGGGGAGGGGATCCTGTTTGGGGGTTCAACT
GAACCACCATGTCCCAAGTTGGATCCGCCCCTGCTTTCAGGACTGGGTCACCTAAGAAGC
ATGAACTGAAGTCCAAACAGAAGCTTGAGAAGAAGCTCAGCTTCTACACAAAAGTGAAAG
ATGCAGTAACCTCCCTAAATGCTACAAAGACTATCTGCAAGAAATCTAAACAGAGGAGCC
GCCAGAAGAAACTGAAAGCATATGATCTCTCAATGCTCTCTGAGTTCCTTCCTGAAACAG
ATGCCTCAAATCTGCACACCGAAGCAAAACTGAACTGCAAATCGAAGCAAGCTTTAGTGC
AACGGGAGGCTGCCCAACTGAATGCTGTGCTGACCAATCCGCAGTTCCAGCTCGACCCGT
TTGCGGCGATCCATCAGCACCTGTTGTCAACACAGCCACCCTCTGCGAGAAAGGAGAGCA
ATTCCGCCAAGCAGGGGAAGGACCCTAAGGACAAGAAAAGAAAGAACAAGAAGAAGAATG
CTTCATCGGCCTCCGAGGCAATGGATATCTGATATGGCAAAGTACCCTACCAAAGGAATG
GGGCGCAATTATCGTCAACCTCAGTTTGAAATCGTGTGATCTCTTAAACCTTGTCAAATT
CTGTTTCAGCATCGGCACTCTCCTCCCAGAGGTGTGAGGTTGGGTCAAATTTTGTTTCAG
CGTCGGCTCTCCTCAGGTTTTTTTTTTGACGGAAAAACAGTTGGAGAGGCTCCTACTGCA
ATATATTACTTGAGTGTACAAGAGACTTTACCTCCTCCCAGCGAACTGCTTGTAGCGTGG
CTGAAGTTTCTTTGTGCTGATTTGTACATATGATGTTTATGATGTTTTGGTTAATTGTTC
ATGTACCTGGTTCTCGCC