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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0241100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:7820306:7825039:-1 gene:Os12g0241100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Iojap-related protein family protein. (Os12t0241100-01)
Sequence

ATGTTGTCCGCCGCGCGATCCGGAGCCCTGGCGCGATGGCGTCCCCGGGAGACCCTCCTC
CCTCGCCTCCTCTCCTCCTCCGCCACCGGCGCGGCCTCCCCGCCTGCGCGGCAGGCGGCG
CTGCTGGAGCTCCCGGAGGTGGAGAAGGTGCTGCGCGACGTGCGGGCGGGGGACGTGCGC
GTCTTCCCCGTCGGCGAGGGCGGGCTGCATGGCGGCTCCTGCGCCGACTACATGGTCGTC
GCCACCGGCCGCTCCGACTGGCACGTCCGCAACATCGCCCAGGCTCTACTCTACAAGATA
AAACAGAAGCAGAAGGGTTCTGATAGAATATTGATGCCAAGTGTTGAAGGCCAGCAAGCT
GGAAAGTGGATTGTCATTGATTCTGGAAGTATCATCATTCATGCACTTGAAGAAAGAGCA
AGAGAATATTATGATTTGGAAAGCATTTGGACAAAAGAAGTGTCTCCAAACATTTCTGTT
CAGGAATTGGAAACTTCCCTTGTGAAGACACGCCGCAGGGACCACTCTCAGAAACCCATG
AAGAGCATTTGA

Peptide Sequence

PEP ID

Os12t0241100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:7820306:7825039:-1 gene:Os12g0241100 transcript:Os12t0241100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Iojap-related protein family protein. (Os12t0241100-01)
Sequence

MLSAARSGALARWRPRETLLPRLLSSSATGAASPPARQAALLELPEVEKVLRDVRAGDVR
VFPVGEGGLHGGSCADYMVVATGRSDWHVRNIAQALLYKIKQKQKGSDRILMPSVEGQQA
GKWIVIDSGSIIIHALEERAREYYDLESIWTKEVSPNISVQELETSLVKTRRRDHSQKPM
KSI

Transcript Sequence

Transcript ID

Os12t0241100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:7820306:7825039:-1 gene:Os12g0241100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Iojap-related protein family protein. (Os12t0241100-01)
Sequence

GCCGCCGTCTCCGCCGCCGCCGATGTTGTCCGCCGCGCGATCCGGAGCCCTGGCGCGATG
GCGTCCCCGGGAGACCCTCCTCCCTCGCCTCCTCTCCTCCTCCGCCACCGGCGCGGCCTC
CCCGCCTGCGCGGCAGGCGGCGCTGCTGGAGCTCCCGGAGGTGGAGAAGGTGCTGCGCGA
CGTGCGGGCGGGGGACGTGCGCGTCTTCCCCGTCGGCGAGGGCGGGCTGCATGGCGGCTC
CTGCGCCGACTACATGGTCGTCGCCACCGGCCGCTCCGACTGGCACGTCCGCAACATCGC
CCAGGCTCTACTCTACAAGATAAAACAGAAGCAGAAGGGTTCTGATAGAATATTGATGCC
AAGTGTTGAAGGCCAGCAAGCTGGAAAGTGGATTGTCATTGATTCTGGAAGTATCATCAT
TCATGCACTTGAAGAAAGAGCAAGAGAATATTATGATTTGGAAAGCATTTGGACAAAAGA
AGTGTCTCCAAACATTTCTGTTCAGGAATTGGAAACTTCCCTTGTGAAGACACGCCGCAG
GGACCACTCTCAGAAACCCATGAAGAGCATTTGAGTACATGAGCTAGTTCCATGATCTAT
GATCTGTGATTGTGAGTGTGTAATCCATCAGATTTGTGTCATCTATTTCTGATGTAGATA
TTGTGTGGAACGAACCGCACCACTGGCCACCATTAACTTAAGCTTCATTTACATTTCATC
TATGGTTTATTCCAGGTCAACAAAGATGATAAAGTGGTGTCAAGCATGTATTTGCATCCA
ATGAATTTTGAGGATGGGTGAGATGCTTGTG