Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0239200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:7688973:7699212:-1 gene:Os12g0239200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0239200-01)
Sequence	ATGCCACCCTCACCCTCAACAAGGAGATCTCCTTCAAGGGAAACTTTCCTCAGGAGGGTC AACAGTTTTGGGAATGCTCTGCCTGCTAAACCAAAGGATGAGGATCTCACTTTGTTTGCT GATATGCAGAAAATTGAGAACGATAATTTCTTACTGGAACCCTCTGAGGATTTTGATGAG TCAATCTCAAAATTGAGTTATTTCCCTGATGTCAAGCTTGGTGTCAACATCCCTACACGG AGAGAAAGCCATGATTTGCTTGACGTTGATGGTGACAAAAATGATTATGAGTGGTTGTTG ACTCCTCCAGAGACCCCACTTTTCCGTTCATTGGATGATGAAGAAGAACAGTCTGCTGGT CAGGATTCTAGGGGCAGAACTAAGAGTAAGCCCATACGAATTTCGGGGTCATCCACAGTG GACAATACTCAAAGGTCTAGTAGAAGCAGTGCAAGCCCTATTAGGCTTAGTCCATCACCA CGCTCCATGTCAAGGACAAGACCCTCTAGTGCAGCTTCTCGCTCTAGTCCACCATTTGCA TTGCAACCACCAACACCATCATGGAGACCTTCAACTCCTCCATCTGCAAAAACATTAACA CCTCCACGGAGATCTCCAAGTCCTGCCTCAACATTAACACCTCCACGGAGGTCTCCTAGT CCTGCCTCAAGGAGGATGAGTACTGGTTCAACCCCAGCGTTAAATAGGACAAGGGGTCCT TCTCCAGTTAAAACTAACCGCATATCTTCTTCACCAAAACTTCAAGGATGGCATTCAAAT GTTCCTGGATTTTCTCATGATGCACCTGCAAATCTTCGAACTTCTCTGCCAGATCATCCA TTATCCCATTCAAGGGGTGGATCCCCTTCTCCTCCTATCAGTGGAAGGGACATGGGTTCC AGAGGCAGACGCCAATCACTATCGCCTACTCCATCTAGAAGAGCAAGTTCATCTCATAGT ATTGAACGAGATCGTTTAAGCTCGTATAGCAAAGCTTCTGCAACATCTTCTGGTGAAGAT GATCTGGATTCCATGCAGTCTCTACCAGTTGCCTATTCCACCAGCCCAGCTGTAAAAAAG AGCTTGTCTATGATGAAGACCAGAACTATTGCTTCATCAAAGAAGCCGTCCACAACTTTT TCCACTAGTTCTGTCCCAAAGCGGTCATTTGATTCTGCAGTTTGGTTGATGGATCATCGC AAAGCTCCCAATAATATGTTCCGGCCACTGCTATCAAGTGTCCCTACTACGACATTTAAT GCTGGCAAAGGAAATGTTGTGCAGCGGCCTATGTTTTCTCATAATTCTTATATGACAACT AGCAGCAATGCAAGCTCTGAGCATAGTGCCAGTTTCGGCCCATATGTGGATAACGACCAA GAGCAGCATGATCAGATTAGTGAATGGGATGATAACCATCAAGTTCATGGTGATATATTT ATGTTTGATAAATTGGATGAATTGAATGAAGAAACCAGTCATGAGGAGACTACAAAATTT GTGGAAAGTGATAGACAGGACATTGACATGGAAAAGGGTTGGGCAGCTAGTCAGACTTCT GGTACAAACAGTTCTCATGTTGGATATGGTGAAATGGCTACTTGCACCAGGTGCGGGAAC GTTTTCAAGGTTATGGATGTGGATAGACAAGGTGACTATTGTGAAGAATGTGGTTTATTG CTTAGCATATGTTCTGCAGGCCCTGTGACACAAACTTTACAAGAAGCACACCAACAGGAC GAAATAACTGCAAATTGTAAATCATATGCTGAATCTGGAACTTCTATAGCCTCGGATTGT GTAGAGTATAGGGAAGAAGCATCTCTTGGTCATCAATTTAATGATGAACCTCCAGCTGAT TGTATAAAAGCATGTTCCCCACTTCAGTCAATGGTGGACACAAATGAGGAAATGCTGCTG GCTCATGAGGTAATGAATCATACCAAAAATATAAAGCCATATCATGTTGATGACTCTCTA AGAAATAACAATGATATTTCATTTCATCCATTTAAGGTAAGTGATAACCAACAAGCATCT GCAGAACACGAGCATTTCAGGGACCAAATTAACAGCCACAGTGAAAGCTTGCCACAATGC CTTCCTGAGCTAAACCGCCAGCATAATGATTCCATCTCTCAAACTGCCTCTGGTGATAAT TATCAACTGGGATCAACAGCATATTCAAGTCCTAAGGTAGAAAACACTGATGCCACTGGG ATATCGGTACTCTTACTCCAGAAGTCAAGTAGCAATAAATGGCCTGTTGTGGAAGGAAGG ACTCTGTCTGCAACAAATATTCTTTGTTCAGAACCCTATTATACAAGGGATAGTATCAGT GCTATGAGGCGTAGCTTTGGACGGGATAGCTCTTCAGCAACTTCTTCCATTGATCTAGGG TCATCAAGGCAATCAGATGTACGTTTTGAGCGTCTCAGGAGTGGCAAGAGGGGTGATTTC GAGAAGGCTCGAATGAGCAGTACCATGAGCCATCAAAGTGTTGCTTCAGTGTCAGATATG TCAATTAGTGGTTCATCAGCTTCACTTTGCCCTCAGAGTGATGTTATTGGTGACACTTGT TTCCCAATTGACACGCTGGAAAGGAGTGCATCGAGAACAACAGTCTCTATTGAAGAACAT GACAGCTCTTGTATGGATGCTTTATCAAGTGGTATGGAGTGTTCATCTGCTGTGCAGCCG ATAATCAATGATGAAATCCTTGTTGACTTGAACACCTCAGGTTTTCATAGGTTAAGTGAA ACAGAAGATATACTTATTAAGAACCATAATATGGAAATGGTGGCTGACAATGATCATTTG AGCACTAACTTGTGTTTATCAGATATTGAAATGCCAAGTGATGCCCTAGAATCTTCAGCT GCTGAGGAAAGTTATATACCAAAAACTGAGGAAGATACTTCCACCAAAGCACACTGCTAT ACAATCAGCACCCTAGAGCATCCAAGCGATGAGAACAACTTTGATGATCTTCAAATGCAG TCTGAAGCAGTTCAGTCTTCAAATGAGGAAAATAAATCCAATGGCTGTTGCACGCTTGCT GTCTCTGAGGATGACGTGTTGGTTTCTGGAACAGATACTAACATAAAGGAACTTCCTAAT GATGCAGAATCACCCGAGGCAGTTGAAGGATCGAGGAAAGAAATTCAGAGATGCTTCACT TTGGAAGAAGCTACCGATACAATTCTCCTCTGCAGTTCTATTGTTCATGACCTTGCATAC AAGGCAGCGACAATTGCACTGGACCATGAGCAGGAACGAGTACACGCAGAGCCTACTCGC CCATCTGTTACCATCGTTGGAAAGTCTATTCCAAAGGAGGATGGTTTACTTAAGCTGACT CACAGACGAACGCCTAACCGTAAGGTTAAAAGGAAAAGATTGGAAGGTGAAACAACCATA ACCGAAAATGCTGAAAAGAAAGATGATATCTCTACAGACCACTCACCCGTGCGTTCCTCT TCTGGAATTACAAGGACATCTGAGAGCATGAAGCCTCCAAAACTGGAATCCAAGTGCAAC TGTATAATTATGTAA

Peptide Sequence

PEP ID	Os12t0239200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:7688973:7699212:-1 gene:Os12g0239200 transcript:Os12t0239200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0239200-01)
Sequence	MPPSPSTRRSPSRETFLRRVNSFGNALPAKPKDEDLTLFADMQKIENDNFLLEPSEDFDE SISKLSYFPDVKLGVNIPTRRESHDLLDVDGDKNDYEWLLTPPETPLFRSLDDEEEQSAG QDSRGRTKSKPIRISGSSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSAASRSSPPFA LQPPTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMSTGSTPALNRTRGP SPVKTNRISSSPKLQGWHSNVPGFSHDAPANLRTSLPDHPLSHSRGGSPSPPISGRDMGS RGRRQSLSPTPSRRASSSHSIERDRLSSYSKASATSSGEDDLDSMQSLPVAYSTSPAVKK SLSMMKTRTIASSKKPSTTFSTSSVPKRSFDSAVWLMDHRKAPNNMFRPLLSSVPTTTFN AGKGNVVQRPMFSHNSYMTTSSNASSEHSASFGPYVDNDQEQHDQISEWDDNHQVHGDIF MFDKLDELNEETSHEETTKFVESDRQDIDMEKGWAASQTSGTNSSHVGYGEMATCTRCGN VFKVMDVDRQGDYCEECGLLLSICSAGPVTQTLQEAHQQDEITANCKSYAESGTSIASDC VEYREEASLGHQFNDEPPADCIKACSPLQSMVDTNEEMLLAHEVMNHTKNIKPYHVDDSL RNNNDISFHPFKVSDNQQASAEHEHFRDQINSHSESLPQCLPELNRQHNDSISQTASGDN YQLGSTAYSSPKVENTDATGISVLLLQKSSSNKWPVVEGRTLSATNILCSEPYYTRDSIS AMRRSFGRDSSSATSSIDLGSSRQSDVRFERLRSGKRGDFEKARMSSTMSHQSVASVSDM SISGSSASLCPQSDVIGDTCFPIDTLERSASRTTVSIEEHDSSCMDALSSGMECSSAVQP IINDEILVDLNTSGFHRLSETEDILIKNHNMEMVADNDHLSTNLCLSDIEMPSDALESSA AEESYIPKTEEDTSTKAHCYTISTLEHPSDENNFDDLQMQSEAVQSSNEENKSNGCCTLA VSEDDVLVSGTDTNIKELPNDAESPEAVEGSRKEIQRCFTLEEATDTILLCSSIVHDLAY KAATIALDHEQERVHAEPTRPSVTIVGKSIPKEDGLLKLTHRRTPNRKVKRKRLEGETTI TENAEKKDDISTDHSPVRSSSGITRTSESMKPPKLESKCNCIIM

Transcript Sequence

Transcript ID	Os12t0239200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:7688973:7699212:-1 gene:Os12g0239200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0239200-01)
Sequence	GATTAATTTAGCTCTGCCTCCAGAAATTTCATCTCCTCTTCCTCTCTCAGCTCAACTGCC TCCTCCTCTCTCTCTCTCCTCCTCGCTTGCCTCCGTCTCACTCCTCCTCCCCTCGCCTCG CCTCGCTCTCGCTTGCTTGCGGCGGAATCCGGCGCGGCGGCGGACGTAGCCTCTCCCCTC CTTTGCTTGCTTGCGCGCGCGCGGACGCCGGCGAACGCGGCGCGGAGGTGCGGTGTGTGT GGGGTTTTCTCTGCTTCTCTCGTTCTGGGACCCGCCCTAGCTTTTGTCTCTCCCCAGTGC GGCGTTGTCACCGGGGGAGCTCGCTGGATTGAAGCTAAGCTGGAGGCGACGCGGATGGTT TGAATCTAATTGGAGATTGCAGGTTATGGTTTTTGGTCCACTTGTTAGGTTACCCAAGAC AGGTTATGATTCTGGTCTTATTTCTCAGAAAGGAGCATAGAAGCATTTAGACAGATCAAA AGGCCGTAAAAGATGCCACCCTCACCCTCAACAAGGAGATCTCCTTCAAGGGAAACTTTC CTCAGGAGGGTCAACAGTTTTGGGAATGCTCTGCCTGCTAAACCAAAGGATGAGGATCTC ACTTTGTTTGCTGATATGCAGAAAATTGAGAACGATAATTTCTTACTGGAACCCTCTGAG GATTTTGATGAGTCAATCTCAAAATTGAGTTATTTCCCTGATGTCAAGCTTGGTGTCAAC ATCCCTACACGGAGAGAAAGCCATGATTTGCTTGACGTTGATGGTGACAAAAATGATTAT GAGTGGTTGTTGACTCCTCCAGAGACCCCACTTTTCCGTTCATTGGATGATGAAGAAGAA CAGTCTGCTGGTCAGGATTCTAGGGGCAGAACTAAGAGTAAGCCCATACGAATTTCGGGG TCATCCACAGTGGACAATACTCAAAGGTCTAGTAGAAGCAGTGCAAGCCCTATTAGGCTT AGTCCATCACCACGCTCCATGTCAAGGACAAGACCCTCTAGTGCAGCTTCTCGCTCTAGT CCACCATTTGCATTGCAACCACCAACACCATCATGGAGACCTTCAACTCCTCCATCTGCA AAAACATTAACACCTCCACGGAGATCTCCAAGTCCTGCCTCAACATTAACACCTCCACGG AGGTCTCCTAGTCCTGCCTCAAGGAGGATGAGTACTGGTTCAACCCCAGCGTTAAATAGG ACAAGGGGTCCTTCTCCAGTTAAAACTAACCGCATATCTTCTTCACCAAAACTTCAAGGA TGGCATTCAAATGTTCCTGGATTTTCTCATGATGCACCTGCAAATCTTCGAACTTCTCTG CCAGATCATCCATTATCCCATTCAAGGGGTGGATCCCCTTCTCCTCCTATCAGTGGAAGG GACATGGGTTCCAGAGGCAGACGCCAATCACTATCGCCTACTCCATCTAGAAGAGCAAGT TCATCTCATAGTATTGAACGAGATCGTTTAAGCTCGTATAGCAAAGCTTCTGCAACATCT TCTGGTGAAGATGATCTGGATTCCATGCAGTCTCTACCAGTTGCCTATTCCACCAGCCCA GCTGTAAAAAAGAGCTTGTCTATGATGAAGACCAGAACTATTGCTTCATCAAAGAAGCCG TCCACAACTTTTTCCACTAGTTCTGTCCCAAAGCGGTCATTTGATTCTGCAGTTTGGTTG ATGGATCATCGCAAAGCTCCCAATAATATGTTCCGGCCACTGCTATCAAGTGTCCCTACT ACGACATTTAATGCTGGCAAAGGAAATGTTGTGCAGCGGCCTATGTTTTCTCATAATTCT TATATGACAACTAGCAGCAATGCAAGCTCTGAGCATAGTGCCAGTTTCGGCCCATATGTG GATAACGACCAAGAGCAGCATGATCAGATTAGTGAATGGGATGATAACCATCAAGTTCAT GGTGATATATTTATGTTTGATAAATTGGATGAATTGAATGAAGAAACCAGTCATGAGGAG ACTACAAAATTTGTGGAAAGTGATAGACAGGACATTGACATGGAAAAGGGTTGGGCAGCT AGTCAGACTTCTGGTACAAACAGTTCTCATGTTGGATATGGTGAAATGGCTACTTGCACC AGGTGCGGGAACGTTTTCAAGGTTATGGATGTGGATAGACAAGGTGACTATTGTGAAGAA TGTGGTTTATTGCTTAGCATATGTTCTGCAGGCCCTGTGACACAAACTTTACAAGAAGCA CACCAACAGGACGAAATAACTGCAAATTGTAAATCATATGCTGAATCTGGAACTTCTATA GCCTCGGATTGTGTAGAGTATAGGGAAGAAGCATCTCTTGGTCATCAATTTAATGATGAA CCTCCAGCTGATTGTATAAAAGCATGTTCCCCACTTCAGTCAATGGTGGACACAAATGAG GAAATGCTGCTGGCTCATGAGGTAATGAATCATACCAAAAATATAAAGCCATATCATGTT GATGACTCTCTAAGAAATAACAATGATATTTCATTTCATCCATTTAAGGTAAGTGATAAC CAACAAGCATCTGCAGAACACGAGCATTTCAGGGACCAAATTAACAGCCACAGTGAAAGC TTGCCACAATGCCTTCCTGAGCTAAACCGCCAGCATAATGATTCCATCTCTCAAACTGCC TCTGGTGATAATTATCAACTGGGATCAACAGCATATTCAAGTCCTAAGGTAGAAAACACT GATGCCACTGGGATATCGGTACTCTTACTCCAGAAGTCAAGTAGCAATAAATGGCCTGTT GTGGAAGGAAGGACTCTGTCTGCAACAAATATTCTTTGTTCAGAACCCTATTATACAAGG GATAGTATCAGTGCTATGAGGCGTAGCTTTGGACGGGATAGCTCTTCAGCAACTTCTTCC ATTGATCTAGGGTCATCAAGGCAATCAGATGTACGTTTTGAGCGTCTCAGGAGTGGCAAG AGGGGTGATTTCGAGAAGGCTCGAATGAGCAGTACCATGAGCCATCAAAGTGTTGCTTCA GTGTCAGATATGTCAATTAGTGGTTCATCAGCTTCACTTTGCCCTCAGAGTGATGTTATT GGTGACACTTGTTTCCCAATTGACACGCTGGAAAGGAGTGCATCGAGAACAACAGTCTCT ATTGAAGAACATGACAGCTCTTGTATGGATGCTTTATCAAGTGGTATGGAGTGTTCATCT GCTGTGCAGCCGATAATCAATGATGAAATCCTTGTTGACTTGAACACCTCAGGTTTTCAT AGGTTAAGTGAAACAGAAGATATACTTATTAAGAACCATAATATGGAAATGGTGGCTGAC AATGATCATTTGAGCACTAACTTGTGTTTATCAGATATTGAAATGCCAAGTGATGCCCTA GAATCTTCAGCTGCTGAGGAAAGTTATATACCAAAAACTGAGGAAGATACTTCCACCAAA GCACACTGCTATACAATCAGCACCCTAGAGCATCCAAGCGATGAGAACAACTTTGATGAT CTTCAAATGCAGTCTGAAGCAGTTCAGTCTTCAAATGAGGAAAATAAATCCAATGGCTGT TGCACGCTTGCTGTCTCTGAGGATGACGTGTTGGTTTCTGGAACAGATACTAACATAAAG GAACTTCCTAATGATGCAGAATCACCCGAGGCAGTTGAAGGATCGAGGAAAGAAATTCAG AGATGCTTCACTTTGGAAGAAGCTACCGATACAATTCTCCTCTGCAGTTCTATTGTTCAT GACCTTGCATACAAGGCAGCGACAATTGCACTGGACCATGAGCAGGAACGAGTACACGCA GAGCCTACTCGCCCATCTGTTACCATCGTTGGAAAGTCTATTCCAAAGGAGGATGGTTTA CTTAAGCTGACTCACAGACGAACGCCTAACCGTAAGGTTAAAAGGAAAAGATTGGAAGGT GAAACAACCATAACCGAAAATGCTGAAAAGAAAGATGATATCTCTACAGACCACTCACCC GTGCGTTCCTCTTCTGGAATTACAAGGACATCTGAGAGCATGAAGCCTCCAAAACTGGAA TCCAAGTGCAACTGTATAATTATGTAAGTTACTCAAGCATCTGGTACGGCAAAGGTGACT TGAAATAGAGGTTGGAATTGATGTATTATGGTAGTTCCATTCCACGCGCAATCAAGTCGT CCACAGTTGGTGAGTGACACAGGGCCTTAAGTTAGATTTTTTTTTTTTTTTGTGATGGTG CATTCCGTTTTTTAGGTAACAGAAGTGCACCCCAGAGCTATTCTTTTGTAAATTCTTTTT TCCCCTATGTTCCTGTTTTGTCAGATCTTCTGCTTGTTATGTGGTCTATCAGGGTTGTCC AAAGTGTGAATTTACTAGATTAAATATCTGTATTTATAGCCTGTTTTGTTGCAATGCATG AGGCTTGTTAAATTCTTA