Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0238900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:7665115:7669540:1 gene:Os12g0238900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os12t0238900-01)
Sequence	CGTCATGCAGTGGGAGTGGGACGTCCCACGGCGGCGTCGTTGCGCTCGCCGGCGGCGGCC GACACCCTGCCGGACGCCGGCTCAGCTGGTCGCCGGAATCATGAGGCTCCCTCCTCGCCG GCCTTTTCTTCAGGGGTTAGAGAAACGGTGACCGGGGTGGAGACGAACGACGACGGCGCC GAGAGAGGGGCGGAGCCGGCGGAGCGCGACAACGCCGCGCCGGCCGCCGCGGCAGCCATC TCCGGCGGCGATCAAGAAGCACAACCAGGTACAGCAGCCGTGGATGCGGCGCCGGGCCAC GACAAATCCTTGCGGACCGCCGCCGCCACCGGAACGTCTCCTCCACGGCACGAACAACCA GGGGAGACCACGACGCGTGCGGATTCGGTAGACCAGCCGCGACATCCGCTGTGCGACTTG TCCGACCACCGCACCGACGTCTGCGACCTCGCCGGCGACATCCGCATGGACGCCAACGCC TCGGCGTTCGTCGTCGTCGTCGACCCGGCGGTCGGCGCGGACGGGCCGACGTACAAGGTC CGGCCGTACCCGCGGAAGGGCGACGCCACGAGCATGGGCCGCGTCACCGAGATCACGGTG CGCACGACCGCGGCGGTCGTGTTCTCGATCAGCGGGTACACGGGCAACCTGTTCCACGAC TTCACCGACGTGATCGTCCCGCTGTACAACACCGCGGCGCGCTACTGCGGCGACGTGCAG CTCGTCGTGACGGACGGCAACGCGGCCACGCGGCGGTGGCTCGCCAGGTACGGCGCTGTC CTGCGCGGTCTGTCGCGCCACGTGCCGCTTGACCTCGCCGCCGAGGCCGCCGCCGGCGGC GGGGAGGTGCACTGCTTCGGGCACACCGTGGTCGGCCTGCGCGCGCACGGGGAGCTCATC ATCGACCGCGAACGCAGCCCGGACGGTCTCGGGATGCCGGACTTCACGCGGTTCCTCCGC CGCGCGCTCTCGCTGCCCCGCGACGCGCCCACGCGCCCCGGCGGCGGCCACGGCGACGCC ACGAAGCCCCAACCCCGCCCGCGCCTTCTCATCATCTCCCGCCGCGGAACACGGCTTCTA CTCAACACCGACGCCGTGGCGCGCGCCGCGGAGCAGGTCGGCTTCGAGGCCGTGGCAAGC GAGCTGGACATGGCCGGCGCGGACCACGACGACGTCGCGCGCGTGGCACGGCTCGTCAAC TCGTTCGACGCGGTGGTGGGCGTGCACGGCGCCGGGCTGACGAACATGGTGTTCCTGCCA CCCGGCGCCGCGGCGGTGCAGATCGTGCCGTGGGGCGGTCTCCGGTGGCTGGCGCGGGCG GACTTCGGCGAGCCGGCGGTGGCGATGGGGCTCAGGTACATCCAGTACGAGGTCGCCGCC GGCGAGAGCACGCTCAAGGACAAGTACCCGCGAGACCACGAGATATTCACCAACCCGACG GCGCTGCACAAGAAGGGGTTCACGTTCATGAGGCACACGTTTCTGAACGGCCAGGACATC ATCGTCGACATCGACCGCTTCAAGCCGGTGTTGCTCCGCGCACTCAACAGCCTCGCGCGC TAA

Peptide Sequence

PEP ID	Os12t0238900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:7665115:7669540:1 gene:Os12g0238900 transcript:Os12t0238900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os12t0238900-01)
Sequence	RHAVGVGRPTAASLRSPAAADTLPDAGSAGRRNHEAPSSPAFSSGVRETVTGVETNDDGA ERGAEPAERDNAAPAAAAAISGGDQEAQPGTAAVDAAPGHDKSLRTAAATGTSPPRHEQP GETTTRADSVDQPRHPLCDLSDHRTDVCDLAGDIRMDANASAFVVVVDPAVGADGPTYKV RPYPRKGDATSMGRVTEITVRTTAAVVFSISGYTGNLFHDFTDVIVPLYNTAARYCGDVQ LVVTDGNAATRRWLARYGAVLRGLSRHVPLDLAAEAAAGGGEVHCFGHTVVGLRAHGELI IDRERSPDGLGMPDFTRFLRRALSLPRDAPTRPGGGHGDATKPQPRPRLLIISRRGTRLL LNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHGAGLTNMVFLP PGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKYPRDHEIFTNPT ALHKKGFTFMRHTFLNGQDIIVDIDRFKPVLLRALNSLAR

Transcript Sequence

Transcript ID	Os12t0238900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:7665115:7669540:1 gene:Os12g0238900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HGA6. (Os12t0238900-01)
Sequence	AACTACTTTGCACTTGCACTAGTTGAGTTCTCTTCTCCCTCCCGCACGGCACCATGATCT CACAGTGTTCCGGCCATGACGTCATGCAGTGGGAGTGGGACGTCCCACGGCGGCGTCGTT GCGCTCGCCGGCGGCGGCCGACACCCTGCCGGACGCCGGCTCAGCTGGTCGCCGGAATCA TGAGGCTCCCTCCTCGCCGGCCTTTTCTTCAGGGGTTAGAGAAACGGTGACCGGGGTGGA GACGAACGACGACGGCGCCGAGAGAGGGGCGGAGCCGGCGGAGCGCGACAACGCCGCGCC GGCCGCCGCGGCAGCCATCTCCGGCGGCGATCAAGAAGCACAACCAGGTACAGCAGCCGT GGATGCGGCGCCGGGCCACGACAAATCCTTGCGGACCGCCGCCGCCACCGGAACGTCTCC TCCACGGCACGAACAACCAGGGGAGACCACGACGCGTGCGGATTCGGTAGACCAGCCGCG ACATCCGCTGTGCGACTTGTCCGACCACCGCACCGACGTCTGCGACCTCGCCGGCGACAT CCGCATGGACGCCAACGCCTCGGCGTTCGTCGTCGTCGTCGACCCGGCGGTCGGCGCGGA CGGGCCGACGTACAAGGTCCGGCCGTACCCGCGGAAGGGCGACGCCACGAGCATGGGCCG CGTCACCGAGATCACGGTGCGCACGACCGCGGCGGTCGTGTTCTCGATCAGCGGGTACAC GGGCAACCTGTTCCACGACTTCACCGACGTGATCGTCCCGCTGTACAACACCGCGGCGCG CTACTGCGGCGACGTGCAGCTCGTCGTGACGGACGGCAACGCGGCCACGCGGCGGTGGCT CGCCAGGTACGGCGCTGTCCTGCGCGGTCTGTCGCGCCACGTGCCGCTTGACCTCGCCGC CGAGGCCGCCGCCGGCGGCGGGGAGGTGCACTGCTTCGGGCACACCGTGGTCGGCCTGCG CGCGCACGGGGAGCTCATCATCGACCGCGAACGCAGCCCGGACGGTCTCGGGATGCCGGA CTTCACGCGGTTCCTCCGCCGCGCGCTCTCGCTGCCCCGCGACGCGCCCACGCGCCCCGG CGGCGGCCACGGCGACGCCACGAAGCCCCAACCCCGCCCGCGCCTTCTCATCATCTCCCG CCGCGGAACACGGCTTCTACTCAACACCGACGCCGTGGCGCGCGCCGCGGAGCAGGTCGG CTTCGAGGCCGTGGCAAGCGAGCTGGACATGGCCGGCGCGGACCACGACGACGTCGCGCG CGTGGCACGGCTCGTCAACTCGTTCGACGCGGTGGTGGGCGTGCACGGCGCCGGGCTGAC GAACATGGTGTTCCTGCCACCCGGCGCCGCGGCGGTGCAGATCGTGCCGTGGGGCGGTCT CCGGTGGCTGGCGCGGGCGGACTTCGGCGAGCCGGCGGTGGCGATGGGGCTCAGGTACAT CCAGTACGAGGTCGCCGCCGGCGAGAGCACGCTCAAGGACAAGTACCCGCGAGACCACGA GATATTCACCAACCCGACGGCGCTGCACAAGAAGGGGTTCACGTTCATGAGGCACACGTT TCTGAACGGCCAGGACATCATCGTCGACATCGACCGCTTCAAGCCGGTGTTGCTCCGCGC ACTCAACAGCCTCGCGCGCTAACCTAGGGTCTGTTTGGCAGAGCTCTAGCGCAAGTCTAA TGGATGAGTCTAGGGTCCGTTCTGCATTCGGCCTAAGCACGCAAACGTGTTCGGTCTGGC CCACATGCGTCTTGCCCATCTTGAGACACTGTGCTAGAAAAAATTGACACAGAATTTACA TAAAAAACTTTTAATATAGGAACATTTTATAT