Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0236400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:7476475:7480266:1 gene:Os12g0236400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADENYLATE KINASE A description:Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase). (Os12t0236400-01)
Sequence

ATGGCGGCGAACCTGGAGGACGTGCCGTCGATGGAGCTGATGACGGAGCTGCTCCGCCGC
ATGAAGTGCAGCTCCAAGCCCGACAAGCGCGTCATCCTCGTCGGTCCACCTGGCTGCGGA
AAGGGAACACAGTCACCGCTGATTAAGGATGAATTTTGCTTGTGCCATTTAGCCACTGGT
GATATGTTGAGGGCTGCAGTGGCTGCTAAAACTCCACTTGGGATTAAGGCTAAAGAAGCT
ATGGACAAGGGAGAGCTTGTTTCTGATGACTTGGTTGTTGGGATTATTGATGAAGCCATG
AAGAAAACTTCATGCCAGAAAGGTTTTATCCTTGATGGTTTCCCTAGAACTGTTGTTCAA
GCACAGAAGCTTGATGAAATGTTGGCCAAACAAGGTACTAAGATTGACAAGGTTCTAAAT
TTTGCAATTGATGATGCAATACTGGAAGAACGAATTACCGGTCGTTGGATCCACCCATCA
AGTGGTAGATCTTATCATACAAAATTTGCTCCTCCTAAGACTCCTGGACTTGATGATGTT
ACTGGAGAACCCTTAATTCAAAGGAAAGATGACACAGCTGCAGTATTGAAGTCAAGGCTT
GAAGCCTTCCACGTACAAACTAAGCCTGTGATTGACTACTACACCAAGAAGGGCATAGTC
GCAAATCTGCATGCCGAAAAACCACCAAAGGAAGTGACTGTTGAGGTCCAGAAAGCCCTA
TCATAA

Peptide Sequence

PEP ID

Os12t0236400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:7476475:7480266:1 gene:Os12g0236400 transcript:Os12t0236400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADENYLATE KINASE A description:Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase). (Os12t0236400-01)
Sequence

MAANLEDVPSMELMTELLRRMKCSSKPDKRVILVGPPGCGKGTQSPLIKDEFCLCHLATG
DMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKTSCQKGFILDGFPRTVVQ
AQKLDEMLAKQGTKIDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPKTPGLDDV
TGEPLIQRKDDTAAVLKSRLEAFHVQTKPVIDYYTKKGIVANLHAEKPPKEVTVEVQKAL
S

Transcript Sequence

Transcript ID

Os12t0236400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:7476475:7480266:1 gene:Os12g0236400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADENYLATE KINASE A description:Adenylate kinase A (EC 2.7.4.3) (ATP-AMP transphosphorylase). (Os12t0236400-01)
Sequence

CCGACCGAGACTCCTCCATTTCAGCGGCGCACGCGGAGAGCACGCGACGCGAGTTCGTCG
ACGAACAAGGCTAGTGCAGTAGTTGTTGCTGCGGAGATGGCGGCGAACCTGGAGGACGTG
CCGTCGATGGAGCTGATGACGGAGCTGCTCCGCCGCATGAAGTGCAGCTCCAAGCCCGAC
AAGCGCGTCATCCTCGTCGGTCCACCTGGCTGCGGAAAGGGAACACAGTCACCGCTGATT
AAGGATGAATTTTGCTTGTGCCATTTAGCCACTGGTGATATGTTGAGGGCTGCAGTGGCT
GCTAAAACTCCACTTGGGATTAAGGCTAAAGAAGCTATGGACAAGGGAGAGCTTGTTTCT
GATGACTTGGTTGTTGGGATTATTGATGAAGCCATGAAGAAAACTTCATGCCAGAAAGGT
TTTATCCTTGATGGTTTCCCTAGAACTGTTGTTCAAGCACAGAAGCTTGATGAAATGTTG
GCCAAACAAGGTACTAAGATTGACAAGGTTCTAAATTTTGCAATTGATGATGCAATACTG
GAAGAACGAATTACCGGTCGTTGGATCCACCCATCAAGTGGTAGATCTTATCATACAAAA
TTTGCTCCTCCTAAGACTCCTGGACTTGATGATGTTACTGGAGAACCCTTAATTCAAAGG
AAAGATGACACAGCTGCAGTATTGAAGTCAAGGCTTGAAGCCTTCCACGTACAAACTAAG
CCTGTGATTGACTACTACACCAAGAAGGGCATAGTCGCAAATCTGCATGCCGAAAAACCA
CCAAAGGAAGTGACTGTTGAGGTCCAGAAAGCCCTATCATAAACTGCCAGTTCTTCAGCC
TATAAACATGACATGTGCCGAAAACCCCTTACACTGGGTTTTCTAGATGTTTAAACTGCT
GCCAACACCATGTGGTTTTCATTTTGATTTGCTGTATGGCGCAATTGCTCCATTTTATCA
CAGTTTTCGCTTCACAGTCTGAAATTTGTCAAAATAATTTGTTGGAATGAGGAAAGAAGT
TTTGTATACCAACACCGATATAATTACATCAAGTCAATCTTGACAGGGT