Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0233300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:7293407:7298321:1 gene:Os12g0233300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine triad (HIT) protein family protein. (Os12t0233300-01)
Sequence	ATGTCGCCGCCGGTGAGCTCGGGGGCGCCGGTGCAGGAGCGGCGCCTCGGGGTGCTCCTC TCCCACCTCCGCCCGTGCGCGCCGCCGGCCGCGCGGCGGGGCAACCACCACCACCACCAC CACGACCTGCGGGTGCGGGAGGCGGAGGGAACGGGCGGCCTCGCCGCGTCTCCCTGCGCC GCCGACGGGAGCGGGGAGACCTCGGGAGGCCAGCGCTGCGTGTTCTGCGAGATCGTGAAG GGCAACAAGCCAGCCTACAAGCTCTACGAGGACGATGTGTGCTTGTGCATCCTGGACACC AAACCACTGAGCACTGGGCATTCACTGATCATTCCAAAACGTCACTTTCCATCACTACAG GCAACACCGCCATCTGTAATAGCAGCTATATGTTGTAAACTCCCACTTATTTCCAGTGCA ATCGTGAAGGCTACTCAATGTGATGCATTCAATGTGCTTGTCAACAATGGAAAGGTAGCA GGGCAGGTTATTTTTCACACTCATGTTCACCTCATTCCCCGTAGAAAAGGCGATAACTTG TGGTCTTCAGAGACTTATGAAAGGAACTCTATCAAGCACAACCAGGAAACCAAAGATCTT GTTAGCGGCATCAAGGAACTACTCTTCCCACCTCAGGATGACAGCGCTGAAGGGTCAACG ATACCGAAGGAACTCTAA

Peptide Sequence

PEP ID	Os12t0233300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:7293407:7298321:1 gene:Os12g0233300 transcript:Os12t0233300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine triad (HIT) protein family protein. (Os12t0233300-01)
Sequence	MSPPVSSGAPVQERRLGVLLSHLRPCAPPAARRGNHHHHHHDLRVREAEGTGGLAASPCA ADGSGETSGGQRCVFCEIVKGNKPAYKLYEDDVCLCILDTKPLSTGHSLIIPKRHFPSLQ ATPPSVIAAICCKLPLISSAIVKATQCDAFNVLVNNGKVAGQVIFHTHVHLIPRRKGDNL WSSETYERNSIKHNQETKDLVSGIKELLFPPQDDSAEGSTIPKEL

Transcript Sequence

Transcript ID	Os12t0233300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:7293407:7298321:1 gene:Os12g0233300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine triad (HIT) protein family protein. (Os12t0233300-01)
Sequence	AACCACGCTCTCTCTCTCTCTCTCTCTCTCTCCTCGCGCCGCGCACGAACTCCAAAGCAC ACGGGCGCGCGCCGCCGCCGCCTCCGCCGCGCCCCATGTCGCCGCCGGTGAGCTCGGGGG CGCCGGTGCAGGAGCGGCGCCTCGGGGTGCTCCTCTCCCACCTCCGCCCGTGCGCGCCGC CGGCCGCGCGGCGGGGCAACCACCACCACCACCACCACGACCTGCGGGTGCGGGAGGCGG AGGGAACGGGCGGCCTCGCCGCGTCTCCCTGCGCCGCCGACGGGAGCGGGGAGACCTCGG GAGGCCAGCGCTGCGTGTTCTGCGAGATCGTGAAGGGCAACAAGCCAGCCTACAAGCTCT ACGAGGACGATGTGTGCTTGTGCATCCTGGACACCAAACCACTGAGCACTGGGCATTCAC TGATCATTCCAAAACGTCACTTTCCATCACTACAGGCAACACCGCCATCTGTAATAGCAG CTATATGTTGTAAACTCCCACTTATTTCCAGTGCAATCGTGAAGGCTACTCAATGTGATG CATTCAATGTGCTTGTCAACAATGGAAAGGTAGCAGGGCAGGTTATTTTTCACACTCATG TTCACCTCATTCCCCGTAGAAAAGGCGATAACTTGTGGTCTTCAGAGACTTATGAAAGGA ACTCTATCAAGCACAACCAGGAAACCAAAGATCTTGTTAGCGGCATCAAGGAACTACTCT TCCCACCTCAGGATGACAGCGCTGAAGGGTCAACGATACCGAAGGAACTCTAAGAAGTAG ATAACCAAGTCAACAGGCTTATTTTCTGCTTCTCTCAGTCATCTTGAAGAGCACTGCTGC GAGATGAGTTGATGTATAGTTTGTACCTCATGCTTCAAAATTTTGATACTAACTGGCTAA GTAATCATCCTAGAAAAGCCAAATGGCAGAAACTTGCTAGTGATCTGAACACTTCATGTG AAAAAAAAAATAGTAAAATTGGGCTTGTTAAACTTGGTAGGCTTTAGCTCTGTGGTTTCA TGGAAGCGAAGAACTGGCAAACCTGGGCCGGCCGGTGGTGAATCGTGGGTTGTTCCCACC TGCACAATGTTTTGATCTTTTTTTTTTTGAACATATGGAAGATGGATGAATATAAGGCGT ACATTTGGTGGGAT