Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0231100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:7171810:7176574:-1 gene:Os12g0231100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0231100-01)
Sequence

GGTGACGGCCACGCCGCCGATAAACCCACGCCGCCGCCGCCGCCGCGGCCGGTCTTGCTC
GCCGGCGCTTCGGGCGACGCCAAGCTCTGCCGCGCCGCGGCGCTGTCACGCGAGGAGGTC
ATCCGCCGCCGCCGGCGCGGCCTCCTGCAGCTCCACTCCCTCTACCGCGCCCAGCTCTGG
GCGCTCGCCGACGAGCTCTCCGCGAGGCACGCCGAGTACTGGTGGGAGCACGGCTCCAGC
CCCGACGCCGGGAATGCCGTTGGTGGCGGCGCTCCCCCTCCTCCTCATCCGGCTGTGAAT
GGCGGCGGCGCTGCTGTCGAGATTGCGGCTGCCAGGGCGGGGTGCTCCGCGGCGAATTGC
GGCGCCAAGGCGATGCCCTTCGCGGCCTACTGCTTCGATCACATCCTCTTCGACCCCAAG
CAGCTGCTCTACAAGCCCTGCGCCTTCGTCACCAACCGAAGTGGCATGCAAAATGGGGTA
GAAACTTGTGGGAAACCTGTTCTGACAGGCATTACTCCATCACGATGTTCTGATCATGAT
CCAAAATCTCAGAGGCTCGTTATAGAAGCTTTGAAAAAAGTTGGAATTGACCTGCACTTG
ACAAGCAATGGAGTGCCAAAACTGAATCTATTGATTTGTGAAACAGTCCGCCAAATTCAG
AGGAAAAGAAAGATGCAGTTGAATGGCGCAAAGAATGCGCCATTTCATAGATCGTCGGAT
TGA

Peptide Sequence

PEP ID

Os12t0231100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:7171810:7176574:-1 gene:Os12g0231100 transcript:Os12t0231100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0231100-01)
Sequence

GDGHAADKPTPPPPPRPVLLAGASGDAKLCRAAALSREEVIRRRRRGLLQLHSLYRAQLW
ALADELSARHAEYWWEHGSSPDAGNAVGGGAPPPPHPAVNGGGAAVEIAAARAGCSAANC
GAKAMPFAAYCFDHILFDPKQLLYKPCAFVTNRSGMQNGVETCGKPVLTGITPSRCSDHD
PKSQRLVIEALKKVGIDLHLTSNGVPKLNLLICETVRQIQRKRKMQLNGAKNAPFHRSSD

Transcript Sequence

Transcript ID

Os12t0231100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:7171810:7176574:-1 gene:Os12g0231100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0231100-01)
Sequence

GGGTGACGGCCACGCCGCCGATAAACCCACGCCGCCGCCGCCGCCGCGGCCGGTCTTGCT
CGCCGGCGCTTCGGGCGACGCCAAGCTCTGCCGCGCCGCGGCGCTGTCACGCGAGGAGGT
CATCCGCCGCCGCCGGCGCGGCCTCCTGCAGCTCCACTCCCTCTACCGCGCCCAGCTCTG
GGCGCTCGCCGACGAGCTCTCCGCGAGGCACGCCGAGTACTGGTGGGAGCACGGCTCCAG
CCCCGACGCCGGGAATGCCGTTGGTGGCGGCGCTCCCCCTCCTCCTCATCCGGCTGTGAA
TGGCGGCGGCGCTGCTGTCGAGATTGCGGCTGCCAGGGCGGGGTGCTCCGCGGCGAATTG
CGGCGCCAAGGCGATGCCCTTCGCGGCCTACTGCTTCGATCACATCCTCTTCGACCCCAA
GCAGCTGCTCTACAAGCCCTGCGCCTTCGTCACCAACCGAAGTGGCATGCAAAATGGGGT
AGAAACTTGTGGGAAACCTGTTCTGACAGGCATTACTCCATCACGATGTTCTGATCATGA
TCCAAAATCTCAGAGGCTCGTTATAGAAGCTTTGAAAAAAGTTGGAATTGACCTGCACTT
GACAAGCAATGGAGTGCCAAAACTGAATCTATTGATTTGTGAAACAGTCCGCCAAATTCA
GAGGAAAAGAAAGATGCAGTTGAATGGCGCAAAGAATGCGCCATTTCATAGATCGTCGGA
TTGATTCTTTTGGATCAACATATGATCCTGTTGTACATGAAGGCTGACAGACATGACGAT
CATCCACTGTAAATACCAGGTATACCAGGTATTGAGGATTTGAGGTGCACCTCGTAGTTC
AAAGGAAAAACAATAAGAGCCAGAAAACACGCTGGAGGTTTTATTACAGTGCAAAAATCT
TTGCAAAGAATAATCTTTCCCTCTACCATCCTTGAAGGAAGTCGAAGTTGGACTTTAAGC
TTCCAAGGAAATGTAAAATGTTCTTTTTTGGATCATATTAGGCTACCCATTTAGGGATGT
ACAGCCTTATCAGTATGTTGTAGTTTTAGCATGTAAGTCATTTTAGCATGTCCCACATTC
ATATTGATGTTAATGAATCTAGATAGATATATATGTC