Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0231000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:7165808:7171019:1 gene:Os12g0231000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Peptide transporter PTR3-A description:TGF-beta receptor, type I/II extracellular region family protein. (Os12t0231000-01)
Sequence	ATGGCTCTGCAAGTGCAAGGCCTTGTGGACTGGAGGGGAAGACCGGTTGATCCCAGGAGG CATGGTGGTCTGAAGGCAGTAATGTTCATCTACGTCTTGATTGTGATGACCAACATGGGG AACATTCCCACTATGCTAAACATAGTGAGCTACCTGCATGGCACAATGCACATGGGCATC GCCGATGCCTCCACCACCGCCGCCAACTTCTACGGTGCAATCTGTGTCTTCTCCTTCCTC GGCGCCTTCATCTCCGACTCCTACATCAAGCGCTTCTACACCATCCTCATCTTTGCTCCC ATCGAAATTCTGGGATACATGCTGCTAGCATGCCAAGCGCACTTCCCGTCGCTGCACCCG CCGCCGTGCGACGCCGCCGCCGGCCAATGCGCGGCGGTGAGCGGGCGGAACCTGAGCCTG CTCCGGCTGGGCCTGTACGTGATCCCGCTCGGCGAGGGCGCGCTGCGGGTGTGCGGGGCG GCGCTGGGTGGCGACCAGTTCGACGGCGGCGAGGTCGGCGGCGACGACCCGGCGGCGGCG GCGGCGGCGGAGGCCCGGGGGAAGGCGAGCTTCTTCAACTGGTTCGCCTTCTGCATCTCG CTGGGGGGGCTCGTGGGGCTCGTGCTCGTGGTGTGGGTGCAGAACAACGAAGGGTGGGAC CTCGGATTCGCGCTCGCCGCGCTCATGGCGCTCGTCGCCATGGCCGTCGTCCTCGCCGGC CTCCCCTTCTACCGCCACCGCGTTCCCACCGGCAGCCCGCTCACCAGAATCCTCCAGGTT TTTGTGGCGGCGTTCAGGAAGAGGAACGTCACGATGCCGGAGAGCTTGGTGGAAATGCAG GAGTGTTCTGACGGCTCGACCATCGAGCTGCTGGATAAAACTCCAGACTTCAAGTTCCTG GACAAGGCGGCGGTGGACGACGGCGACCGGCGGCGATGGTCGGCGTGCACGGTGACGCAG GTGGAGGAGGCGAAGATCATCCTCCGCATGCTCCCCGTCTTCCTCACCTCCGTCCTCGGC TACGTCCCCATCCCTCTCCTCCTCACCTTCACCGTGCAGCAGGGCGGCGCCATGGACACC CGCCTCGCCGGCACCAGCGTCCCGCCGGCGAGCCTCTTCGTCGTCCCCATCGTCTTCCAG ATGCTCATCCTCGTCGCCTACGACCGCGCCGCCGTGCCGTGGCTCCGCCGCGCCACGGGC TACGCCGCGGGCGTCACCCACCTCCAGCGCGTCGGCCTCGGGTTCGCGTCCAGCGCCGCC GCGCTCGCGCTCGCAGCCGCCGTGGAGTCGCGCCGCCGCCGCTGCCTCGGCGTCGCGGCG CCGGCCATGTCGGTGTTCTGGCTGACGCCGCAGTTCTTCCTCCTCGGCGTCATGGACGTC ACCTCCTTCGTCGGCCTCCTCGAGTTCTTCTACAGCGAGGCGTCCGCCGGCATGAAGTCC ATCGGCGGCGCCGTCTTCTTCTGCATCCTCGGCGTCGCGTCGTGGCTTGGCGGCGCCCTC ATCCAGGCGGTCAACCGCGCCACCGCCGGCGGTGCCGGACACGGCGGTTGGCTCGACGGC GCCGACCTCGACGCCAGCCACCTCGACCGGTTCTACTGGCTGCTCGCCGTGTTCGAGCTC GTCGCCTTCTTCCTCTACCTCTACTCCGCATGGAGGTACACGTATAGGCATCATCCACGT GTTCAGCCATCAATGGAGGATGCCAAGGTATCCGCGACAGCGACGACGACGACGAAGAAA GCCGAGGTTTGA

Peptide Sequence

PEP ID	Os12t0231000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:7165808:7171019:1 gene:Os12g0231000 transcript:Os12t0231000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Peptide transporter PTR3-A description:TGF-beta receptor, type I/II extracellular region family protein. (Os12t0231000-01)
Sequence	MALQVQGLVDWRGRPVDPRRHGGLKAVMFIYVLIVMTNMGNIPTMLNIVSYLHGTMHMGI ADASTTAANFYGAICVFSFLGAFISDSYIKRFYTILIFAPIEILGYMLLACQAHFPSLHP PPCDAAAGQCAAVSGRNLSLLRLGLYVIPLGEGALRVCGAALGGDQFDGGEVGGDDPAAA AAAEARGKASFFNWFAFCISLGGLVGLVLVVWVQNNEGWDLGFALAALMALVAMAVVLAG LPFYRHRVPTGSPLTRILQVFVAAFRKRNVTMPESLVEMQECSDGSTIELLDKTPDFKFL DKAAVDDGDRRRWSACTVTQVEEAKIILRMLPVFLTSVLGYVPIPLLLTFTVQQGGAMDT RLAGTSVPPASLFVVPIVFQMLILVAYDRAAVPWLRRATGYAAGVTHLQRVGLGFASSAA ALALAAAVESRRRRCLGVAAPAMSVFWLTPQFFLLGVMDVTSFVGLLEFFYSEASAGMKS IGGAVFFCILGVASWLGGALIQAVNRATAGGAGHGGWLDGADLDASHLDRFYWLLAVFEL VAFFLYLYSAWRYTYRHHPRVQPSMEDAKVSATATTTTKKAEV

Transcript Sequence

Transcript ID	Os12t0231000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:7165808:7171019:1 gene:Os12g0231000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Peptide transporter PTR3-A description:TGF-beta receptor, type I/II extracellular region family protein. (Os12t0231000-01)
Sequence	ACAAGCCACAAAGATATATCATATCATCTCATCTCATCAGGAGTCAAGACTGCGACACAT AGTGAAGTGAAGCCCACTTAGCTAGCTTGCAATTGAGATCTTGCAGAGAATTGTGAAGAT CTAGAGCTATAGCCATGGCTCTGCAAGTGCAAGGCCTTGTGGACTGGAGGGGAAGACCGG TTGATCCCAGGAGGCATGGTGGTCTGAAGGCAGTAATGTTCATCTACGTCTTGATTGTGA TGACCAACATGGGGAACATTCCCACTATGCTAAACATAGTGAGCTACCTGCATGGCACAA TGCACATGGGCATCGCCGATGCCTCCACCACCGCCGCCAACTTCTACGGTGCAATCTGTG TCTTCTCCTTCCTCGGCGCCTTCATCTCCGACTCCTACATCAAGCGCTTCTACACCATCC TCATCTTTGCTCCCATCGAAATTCTGGGATACATGCTGCTAGCATGCCAAGCGCACTTCC CGTCGCTGCACCCGCCGCCGTGCGACGCCGCCGCCGGCCAATGCGCGGCGGTGAGCGGGC GGAACCTGAGCCTGCTCCGGCTGGGCCTGTACGTGATCCCGCTCGGCGAGGGCGCGCTGC GGGTGTGCGGGGCGGCGCTGGGTGGCGACCAGTTCGACGGCGGCGAGGTCGGCGGCGACG ACCCGGCGGCGGCGGCGGCGGCGGAGGCCCGGGGGAAGGCGAGCTTCTTCAACTGGTTCG CCTTCTGCATCTCGCTGGGGGGGCTCGTGGGGCTCGTGCTCGTGGTGTGGGTGCAGAACA ACGAAGGGTGGGACCTCGGATTCGCGCTCGCCGCGCTCATGGCGCTCGTCGCCATGGCCG TCGTCCTCGCCGGCCTCCCCTTCTACCGCCACCGCGTTCCCACCGGCAGCCCGCTCACCA GAATCCTCCAGGTTTTTGTGGCGGCGTTCAGGAAGAGGAACGTCACGATGCCGGAGAGCT TGGTGGAAATGCAGGAGTGTTCTGACGGCTCGACCATCGAGCTGCTGGATAAAACTCCAG ACTTCAAGTTCCTGGACAAGGCGGCGGTGGACGACGGCGACCGGCGGCGATGGTCGGCGT GCACGGTGACGCAGGTGGAGGAGGCGAAGATCATCCTCCGCATGCTCCCCGTCTTCCTCA CCTCCGTCCTCGGCTACGTCCCCATCCCTCTCCTCCTCACCTTCACCGTGCAGCAGGGCG GCGCCATGGACACCCGCCTCGCCGGCACCAGCGTCCCGCCGGCGAGCCTCTTCGTCGTCC CCATCGTCTTCCAGATGCTCATCCTCGTCGCCTACGACCGCGCCGCCGTGCCGTGGCTCC GCCGCGCCACGGGCTACGCCGCGGGCGTCACCCACCTCCAGCGCGTCGGCCTCGGGTTCG CGTCCAGCGCCGCCGCGCTCGCGCTCGCAGCCGCCGTGGAGTCGCGCCGCCGCCGCTGCC TCGGCGTCGCGGCGCCGGCCATGTCGGTGTTCTGGCTGACGCCGCAGTTCTTCCTCCTCG GCGTCATGGACGTCACCTCCTTCGTCGGCCTCCTCGAGTTCTTCTACAGCGAGGCGTCCG CCGGCATGAAGTCCATCGGCGGCGCCGTCTTCTTCTGCATCCTCGGCGTCGCGTCGTGGC TTGGCGGCGCCCTCATCCAGGCGGTCAACCGCGCCACCGCCGGCGGTGCCGGACACGGCG GTTGGCTCGACGGCGCCGACCTCGACGCCAGCCACCTCGACCGGTTCTACTGGCTGCTCG CCGTGTTCGAGCTCGTCGCCTTCTTCCTCTACCTCTACTCCGCATGGAGGTACACGTATA GGCATCATCCACGTGTTCAGCCATCAATGGAGGATGCCAAGGTATCCGCGACAGCGACGA CGACGACGAAGAAAGCCGAGGTTTGAGTGACAGTTGAATCTACTACCTCCGTCTCAGGAA TGTAGCTATTTCTGGCTATGAATCTTGGACATGTTTTGTTTTCATGGTTCATAGTTGAAG ATAGCTTTATTTTAGAACGAAGGTAGTAAAATGAAAGCTGTGATGGCTCTATGTACCATA GAAAAAAAATGTTGTAGCTAATGATCCTATAGGTGATGATGAGACAGTAGTGTGGGTTTG AACCCTTTGATTGAGAAATGGATGGCTGAGATTGCGTGCGGTTAGTGTTGTGCAGTCACA ATAGCAACCGCACTGTAACTCAGTCCAGTGTTACAGAGAGGCTCTCGTATAAATGTTAGT ATTTTGAATATTTCATGTTTTGGATTGATATAATCTAATAAAACTGAAAAGATCGTTGGT