Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0230200-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:7112287:7116163:1 gene:Os12g0230200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 29 description:Similar to Protein kinase-like protein. (Os12t0230200-01);Similar to Calcium-dependent protein kinase. (Os12t0230200-02)
Sequence	ATGGGCAACTGCTGCGTGTCCCGGCCGTCCGGCGCCGACAAGCGGCGGCGCTGCGGCAGC TCCACCGCCCCGCACACCCGCGGCGGCAGGCGGGTGATCGGCGCCGCCAACATGCGGTGC CTCTCCACGGTCTCCTCCGTGTCGGACGCGGCGCGCGCCGTGATGTCGAACGAGCCGGCG ACCGTGCTGGGCAACAGCGGCAGCAGCGGCAACGGCGGCGTGATGGCGGCGGAGGAGATG CTGCGGCGGTACGAGATCGGGGAGGAGCTGGGTCGGGGGGAGTTCGGGGTGACGCGGCGG TGCCGGGACGCGGTGACGGGGGAGCGGCTGGCGTGCAAGTCGATCAGCAAGCGGAAGCTC CGGAGCAGCGTGGACGTGGAGGACGTGCGGCGGGAGGTGGCCATCATGCGGTCGCTGCCG GCGCACGCCAACGTGGTGAGGCTCCGGGAGGCGTTCGAGGACGCCGACGCCGTCCACCTC GTCATGGAGGTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCGTCGCCCGCGGCCACTAC ACCGAGCGCGCCGCCGCCGCCGTCATGCGCACCATCATGGACGTCGTCCAGCACTGTCAC AAGAACGGCGTCATGCATCGGGACCTCAAACCTGAGAACTTTCTGTATGCCAATGCATCT GAGAACTCCCCTCTCAAGGTCATCGACTTCGGCCTCTCAGTGTGCTTCAAACCTGGTGCA AGATTCAATGAGATTGTTGGATCTCCCTACTACATGGCACCAGAAGTCCTGAAGAGAAAC TATGGACAAGAAATAGACATATGGAGTGCAGGAGTCATACTGTACATCTTGCTATGTGGT GTTCCTCCTTTCTGGGCCGAGACCGACGAAGGGATCGCACAGGCCATCATCCGGTCACAT ATCGACTTCCAAAGAGAGCCTTGGCCAAAGGTGTCAGATAATGCCAAGGATCTTGTAAGG AGGATGCTTGATCCAAACCCATATACTCGGTTGACGGCTCAACAGGTTCTAGAGCATCCT TGGATACAGAATGCAAGTGCAGCTCCCAACATTCCTCTGGGAGAAGCAGTCAGGTCCAGG CTGAAGCAATTCACTGTTATGAACAAGTTCAAGAAGAAGGCCTTACTTGTGGTGGCGGAG TACTTACCAACCGAAGAGCTGGATGCAATCAGGGAGCTGTTCAATATGTTGGACACCAAA AAGAAGGGGCACTTGACACTAGAAGAGCTCAGAAAGGGACTGCAAGTGATAGGGCACAAC ATCCATGACACAGATGTCGATATGCTCATGGAAGCTGCAGACATAGATGGAAATGGCATA CTGGATTGCAAGGAGTTTGTGACAGTATCCATTCACCTGAAGAAAATCCGTAGCGATGAG CACCTTCCGAAGGTGTTCAGCTTCTTCGACAAGAACGGCAGCGGGTACATAGAGATCGAA GAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCGACGACATATTTCTG GATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTGAGTTAATGATGTCA GCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAGTTTACAACACTCTC AGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTGGTCCACTTGTTGCA GCAGGAAAATAG

Peptide Sequence

PEP ID	Os12t0230200-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:7112287:7116163:1 gene:Os12g0230200 transcript:Os12t0230200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 29 description:Similar to Protein kinase-like protein. (Os12t0230200-01);Similar to Calcium-dependent protein kinase. (Os12t0230200-02)
Sequence	MGNCCVSRPSGADKRRRCGSSTAPHTRGGRRVIGAANMRCLSTVSSVSDAARAVMSNEPA TVLGNSGSSGNGGVMAAEEMLRRYEIGEELGRGEFGVTRRCRDAVTGERLACKSISKRKL RSSVDVEDVRREVAIMRSLPAHANVVRLREAFEDADAVHLVMEVCEGGELFDRIVARGHY TERAAAAVMRTIMDVVQHCHKNGVMHRDLKPENFLYANASENSPLKVIDFGLSVCFKPGA RFNEIVGSPYYMAPEVLKRNYGQEIDIWSAGVILYILLCGVPPFWAETDEGIAQAIIRSH IDFQREPWPKVSDNAKDLVRRMLDPNPYTRLTAQQVLEHPWIQNASAAPNIPLGEAVRSR LKQFTVMNKFKKKALLVVAEYLPTEELDAIRELFNMLDTKKKGHLTLEELRKGLQVIGHN IHDTDVDMLMEAADIDGNGILDCKEFVTVSIHLKKIRSDEHLPKVFSFFDKNGSGYIEIE ELKEALSPRGDQKSIDDIFLDVDIDKDGKISYEEFELMMSAGMDWRNASRQYSRAVYNTL SRKIFKEVSLKLDHSGPLVAAGK

Transcript Sequence

Transcript ID	Os12t0230200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:7112287:7116163:1 gene:Os12g0230200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 29 description:Similar to Protein kinase-like protein. (Os12t0230200-01);Similar to Calcium-dependent protein kinase. (Os12t0230200-02)
Sequence	TTTCCTTCCATCTCTCTCTCTCCTCCTCCTCTCTTGCCCTAGAGAGAGAGAGAGAGAGGG AGGGGGCCGCAAGAGAGAGAGAGATCGATCACCGGCCGCCCTCCGGAGCTCGCGCGCTCG TTCGTTCGTTCGTTCGATCATTCGTACGTCCACAACAATTCCGGCGACGCGACCGTCGCC GTACGTTTGCGGTGGCGCGGCAGCGTCGTCGGCGGTGAAGAAGAAGAAGAAGAAGATCGA AGAAGAGGAAGAGGATGGGCAACTGCTGCGTGTCCCGGCCGTCCGGCGCCGACAAGCGGC GGCGCTGCGGCAGCTCCACCGCCCCGCACACCCGCGGCGGCAGGCGGGTGATCGGCGCCG CCAACATGCGGTGCCTCTCCACGGTCTCCTCCGTGTCGGACGCGGCGCGCGCCGTGATGT CGAACGAGCCGGCGACCGTGCTGGGCAACAGCGGCAGCAGCGGCAACGGCGGCGTGATGG CGGCGGAGGAGATGCTGCGGCGGTACGAGATCGGGGAGGAGCTGGGTCGGGGGGAGTTCG GGGTGACGCGGCGGTGCCGGGACGCGGTGACGGGGGAGCGGCTGGCGTGCAAGTCGATCA GCAAGCGGAAGCTCCGGAGCAGCGTGGACGTGGAGGACGTGCGGCGGGAGGTGGCCATCA TGCGGTCGCTGCCGGCGCACGCCAACGTGGTGAGGCTCCGGGAGGCGTTCGAGGACGCCG ACGCCGTCCACCTCGTCATGGAGGTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCGTCG CCCGCGGCCACTACACCGAGCGCGCCGCCGCCGCCGTCATGCGCACCATCATGGACGTCG TCCAGCACTGTCACAAGAACGGCGTCATGCATCGGGACCTCAAACCTGAGAACTTTCTGT ATGCCAATGCATCTGAGAACTCCCCTCTCAAGGTCATCGACTTCGGCCTCTCAGTGTGCT TCAAACCTGGTGCAAGATTCAATGAGATTGTTGGATCTCCCTACTACATGGCACCAGAAG TCCTGAAGAGAAACTATGGACAAGAAATAGACATATGGAGTGCAGGAGTCATACTGTACA TCTTGCTATGTGGTGTTCCTCCTTTCTGGGCCGAGACCGACGAAGGGATCGCACAGGCCA TCATCCGGTCACATATCGACTTCCAAAGAGAGCCTTGGCCAAAGGTGTCAGATAATGCCA AGGATCTTGTAAGGAGGATGCTTGATCCAAACCCATATACTCGGTTGACGGCTCAACAGG TTCTAGAGCATCCTTGGATACAGAATGCAAGTGCAGCTCCCAACATTCCTCTGGGAGAAG CAGTCAGGTCCAGGCTGAAGCAATTCACTGTTATGAACAAGTTCAAGAAGAAGGCCTTAC TTGTGGTGGCGGAGTACTTACCAACCGAAGAGCTGGATGCAATCAGGGAGCTGTTCAATA TGTTGGACACCAAAAAGAAGGGGCACTTGACACTAGAAGAGCTCAGAAAGGGACTGCAAG TGATAGGGCACAACATCCATGACACAGATGTCGATATGCTCATGGAAGCTGCAGACATAG ATGGAAATGGCATACTGGATTGCAAGGAGTTTGTGACAGTATCCATTCACCTGAAGAAAA TCCGTAGCGATGAGCACCTTCCGAAGGTGTTCAGCTTCTTCGACAAGAACGGCAGCGGGT ACATAGAGATCGAAGAGTTGAAAGAAGCCCTCTCCCCAAGAGGTGACCAGAAGTCGATCG ACGACATATTTCTGGATGTTGACATAGACAAGGATGGGAAGATAAGCTACGAGGAGTTTG AGTTAATGATGTCAGCCGGAATGGACTGGAGGAATGCATCCCGGCAATACTCGAGAGCAG TTTACAACACTCTCAGCCGCAAGATATTCAAGGAAGTGTCCCTGAAGCTTGATCACAGTG GTCCACTTGTTGCAGCAGGAAAATAGCAACCAGCTGTTAACTAAGTGATGTGTTCTCTAC ATGCAATGCTCACTGCCTCACTCATAACTGAGAGAATGTGAAAAACATGGCGCAGTTTTC CTTGTTCGCGTATTGGTCTCCACATTTTTGGGATGCAAAGGTACCACGGGGTTCAGTGAC CCTGAATGTTTCAGATGCAGATGTCAAAGAGCAGGCTTAAATACACCCTTTCTCTTTCTC TGAAAACAGAGGGAAAAAAAGAAAGAAAGAGTTGTATCCTTCTGACTTTGAAGTCACTCT CCATGTTTGTTAATGTAAAACCAGAGGTAGGCCGAATCTCATATTGTTCAACACAGGAGG CAGCAATGCCCTGTACCACTAACCGCTTTGGTGCAAATTCTCCGCGGCCGCACAGTAAGG GCCAAAAAAAGAAAGAAGCAATAATATAAGATTGTTCAATTCAAC