Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0227400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:6932587:6937071:1 gene:Os12g0227400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allyl alcohol dehydrogenase. (Os12t0227400-01)
Sequence

ATGGCGGCGACGGTGGTGAGCAACAAGAGGGTGATACTGAAGCGGTACGTGACGGGACTT
GTCTCGGAGGACGACATGGAGGTGGTGACGGTGGAGGCACCGCCGCTGGCCGTGCCGGCA
GGGTCGAAGACGGTGGTGGTCAAGAACCTGTATATCTCATGCGACCCCTACATGCGTAAC
CGGATGACCTACCACGAGGAGCCTAGCTATGTTCCGGACTTTGTTCTAGGAGAGGTTTTG
GTAAATTTTGGCGTGATGAAGGTGATATCATCTGGGCACCAGGATTTCAAGGCAGGTGAT
CTTGTTTGGGGGATAACCGGATGGGAAGAATATACGGTGATCAACAATCCAGAAACACTT
TTCAAGATCAATCACCCTGAACTTCCTCTGTCCTACTACACTGGTATTCTGGGAATGCCA
GGGCTTACTGCCTATGGTGGATTCTTTGAAGTGGCCAAGCCAAAGAAAGGTGAATATGTC
TTCATCTCATCAGCATTCGGCGCCGTAGGTCAGATTGTTGGGCAGCTTGCTAAGATCACA
GGATGCTACGTGGTTGGTAGTGCTGGTTCTGATGAAAAGGTCAACTTATTGAAGACCAAA
TTTGGCTTTGACGATGCTTTCAACTACAAGAAGGAGCTAGACCTCGAGGCAGCCCTAAAG
AGGTGTTTTCCAGATGGTATCGACATCTACTTCGAGAATGTAGGTGGTGCAATGCTAGAC
GCAGTGCTACCTAACATGCGGGTAGCTGGCCGCATAGCGGCATGCGGGATGATCTCACAG
TACAACCTGGAGCAGCCGGAGGGAGTGTATAACATGATTTGCATCGTCACCAAGCGCCTA
CGCATGCAGGGATTCCTTGTGTTTGACTTCTATGATATGTACTACCAGATCGAGGAGCAG
ATTGCCGGGTACCTGAAGGAAGGGAAGGTGGCATACACAGAGGATGTCGTTGAGGGGCTC
GACGCTGCGCCGGCAGCACTTGTCAAGCTCTTTACTAGCAGCAGCATCGGCAAACAGCTC
GTTGCCGTCGCACGGGAGTGA

Peptide Sequence

PEP ID

Os12t0227400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:6932587:6937071:1 gene:Os12g0227400 transcript:Os12t0227400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allyl alcohol dehydrogenase. (Os12t0227400-01)
Sequence

MAATVVSNKRVILKRYVTGLVSEDDMEVVTVEAPPLAVPAGSKTVVVKNLYISCDPYMRN
RMTYHEEPSYVPDFVLGEVLVNFGVMKVISSGHQDFKAGDLVWGITGWEEYTVINNPETL
FKINHPELPLSYYTGILGMPGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVGQLAKIT
GCYVVGSAGSDEKVNLLKTKFGFDDAFNYKKELDLEAALKRCFPDGIDIYFENVGGAMLD
AVLPNMRVAGRIAACGMISQYNLEQPEGVYNMICIVTKRLRMQGFLVFDFYDMYYQIEEQ
IAGYLKEGKVAYTEDVVEGLDAAPAALVKLFTSSSIGKQLVAVARE

Transcript Sequence

Transcript ID

Os12t0227400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:6932587:6937071:1 gene:Os12g0227400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Allyl alcohol dehydrogenase. (Os12t0227400-01)
Sequence

TCCAATTGTAGCTTGGTTAGGCAGACCCTCCCAGTTCATTCGGAGAAGAAAGGGTAGGAC
GAGGGCAACAATGGCGGCGACGGTGGTGAGCAACAAGAGGGTGATACTGAAGCGGTACGT
GACGGGACTTGTCTCGGAGGACGACATGGAGGTGGTGACGGTGGAGGCACCGCCGCTGGC
CGTGCCGGCAGGGTCGAAGACGGTGGTGGTCAAGAACCTGTATATCTCATGCGACCCCTA
CATGCGTAACCGGATGACCTACCACGAGGAGCCTAGCTATGTTCCGGACTTTGTTCTAGG
AGAGGTTTTGGTAAATTTTGGCGTGATGAAGGTGATATCATCTGGGCACCAGGATTTCAA
GGCAGGTGATCTTGTTTGGGGGATAACCGGATGGGAAGAATATACGGTGATCAACAATCC
AGAAACACTTTTCAAGATCAATCACCCTGAACTTCCTCTGTCCTACTACACTGGTATTCT
GGGAATGCCAGGGCTTACTGCCTATGGTGGATTCTTTGAAGTGGCCAAGCCAAAGAAAGG
TGAATATGTCTTCATCTCATCAGCATTCGGCGCCGTAGGTCAGATTGTTGGGCAGCTTGC
TAAGATCACAGGATGCTACGTGGTTGGTAGTGCTGGTTCTGATGAAAAGGTCAACTTATT
GAAGACCAAATTTGGCTTTGACGATGCTTTCAACTACAAGAAGGAGCTAGACCTCGAGGC
AGCCCTAAAGAGGTGTTTTCCAGATGGTATCGACATCTACTTCGAGAATGTAGGTGGTGC
AATGCTAGACGCAGTGCTACCTAACATGCGGGTAGCTGGCCGCATAGCGGCATGCGGGAT
GATCTCACAGTACAACCTGGAGCAGCCGGAGGGAGTGTATAACATGATTTGCATCGTCAC
CAAGCGCCTACGCATGCAGGGATTCCTTGTGTTTGACTTCTATGATATGTACTACCAGAT
CGAGGAGCAGATTGCCGGGTACCTGAAGGAAGGGAAGGTGGCATACACAGAGGATGTCGT
TGAGGGGCTCGACGCTGCGCCGGCAGCACTTGTCAAGCTCTTTACTAGCAGCAGCATCGG
CAAACAGCTCGTTGCCGTCGCACGGGAGTGATACGGTGCCATGTTGCTCGGTACGTGAGT
TGGCATTATTCAGTAGCGTACTTGTTCAAAATTTAGATATAAGGGCTTCCAGTTTAGCTT
GTTGGATTCAGAAATAAAGAACTGATATGTTCAGAAC