Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0224500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:6760060:6763030:-1 gene:Os12g0224500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os12t0224500-01)
Sequence	ATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAG CGGAAGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGTCTGAT AAGTGGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTGAGGGC AGATGTTTGAGGTCTTTCCACGCAACAGAGAAACACATTACAGAAATAAACCAGTGCACA ACCCTTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGAGTGAA CCGCTATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTGGATTG CTGGGTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAAAATGT GGACACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTATGCAG CCCTTAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGCATAAA TGCCATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAGTATGC AGACGCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTGAAGAT GATGAAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAATTTTG ATCTACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACCACATT ATCTTTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGCAAGAA GACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAA CCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCC AATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGT GGTTGGCTTGATGACTGA

Peptide Sequence

PEP ID	Os12t0224500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:6760060:6763030:-1 gene:Os12g0224500 transcript:Os12t0224500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os12t0224500-01)
Sequence	MDRPRRPGSDRRYPPLRFRKRKRSSSDSRSSKLNNKPGSDKWEDVCSICDDGGDFLCCEG RCLRSFHATEKHITEINQCTTLGLTEEQWKIFRQNDEKSEPLYICKNCKYNQHQCFSCGL LGSSDLSSGAEVFQCEDEKCGHFYHPKCLARLLYPDSSMQPLNFEEEVARGLKFLCPVHK CHVCKGGENKNDMENQFAVCRRCPTVYHRKCLPSDIVFEDDESNGIVQRAWDDVLRDQIL IYCMKHEIDPELGTPARNHIIFPDCKNLLTRGPSKPKGQEDAPAVLDIPEEDMSPDHSSE PSQPPPQPAAETDQTDQDLSNGFNSFAPKALFPLPYPGSCGWLDD

Transcript Sequence

Transcript ID	Os12t0224500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:6760060:6763030:-1 gene:Os12g0224500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, PHD-type domain containing protein. (Os12t0224500-01)
Sequence	GACGGCAACGGCGTTCCCCGCCTCCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCC GCCGCCGCCTCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCA ACCCCAACCCCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCCCGCCCGCCCGGGATTC CGTCCATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCA GGAAGCGGAAGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGT CTGATAAGTGGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTG AGGGCAGATGTTTGAGGTCTTTCCACGCAACAGAGAAACACATTACAGAAATAAACCAGT GCACAACCCTTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGA GTGAACCGCTATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTG GATTGCTGGGTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAA AATGTGGACACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTA TGCAGCCCTTAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGC ATAAATGCCATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAG TATGCAGACGCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTG AAGATGATGAAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAA TTTTGATCTACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACC ACATTATCTTTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGC AAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCT CCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATC TTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCT CCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACA TATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAG TTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTA TTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATTGCGGTTGACCAGTGTCC AGTAGCCTGCATTATGTTTCTGATGTTTTTGTTTCCAGAGATGTCCAAGTGAAGCAATAA GCTGGTGCATATCTGTGCTATT